Changeset 2824


Ignore:
Timestamp:
Aug 31, 2012, 9:14:58 AM (11 years ago)
Author:
Peter
Message:

remove intermediate libraries. Makefiles in corresponding sub-directory are modified so 'make all' now builds yat/libyat.la. closes #718

Location:
trunk/yat
Files:
15 edited

Legend:

Unmodified
Added
Removed

  • trunk/yat/Makefile.am

    r2787 r2824  
    2727yat_libyat_la_SOURCES =
    2828
    29 # Dummy C++ source to cause C++ linking.
    30 nodist_EXTRA_yat_libyat_la_SOURCES = dummy.cc
    31 
    3229yat_libyat_la_LDFLAGS = -version-info $(YAT_LT_VERSION) $(AM_LDFLAGS)
    3330
    3431yat_libyat_la_LIBADD = \
    35   yat/classifier/libclassifier.la \
    36   yat/normalizer/libnormalizer.la \
    37   yat/omic/libomic.la \
    38   yat/random/librandom.la \
    39   yat/regression/libregression.la \
    40   yat/statistics/libstatistics.la \
    41   yat/utility/libutility.la \
    4232  $(YAT_PRIMARY_LIBS) $(LIBM)
    4333

  • trunk/yat/classifier/Makefile

    r2749 r2824  
    1818# along with yat. If not, see <http://www.gnu.org/licenses/>.
    1919
    20 all:; cd ../.. && $(MAKE) yat/classifier/libclassifier.la
     20all:; cd ../.. && $(MAKE) yat/libyat.la

  • trunk/yat/classifier/Makefile.am

    r2787 r2824  
    2121# along with yat. If not, see <http://www.gnu.org/licenses/>.
    2222
    23 noinst_LTLIBRARIES += yat/classifier/libclassifier.la
    24 yat_classifier_libclassifier_la_SOURCES = \
     23yat_libyat_la_SOURCES += \
    2524  yat/classifier/BootstrapSampler.cc \
    2625  yat/classifier/ConsensusInputRanker.cc \

  • trunk/yat/normalizer/Makefile

    r2749 r2824  
    1818# along with yat. If not, see <http://www.gnu.org/licenses/>.
    1919
    20 all:; cd ../.. && $(MAKE) yat/normalizer/libnormalizer.la
     20all:; cd ../.. && $(MAKE) yat/libyat.la

  • trunk/yat/normalizer/Makefile.am

    r2787 r2824  
    2121# along with yat. If not, see <http://www.gnu.org/licenses/>.
    2222
    23 noinst_LTLIBRARIES += yat/normalizer/libnormalizer.la
    24 yat_normalizer_libnormalizer_la_SOURCES = \
     23yat_libyat_la_SOURCES += \
    2524  yat/normalizer/qQuantileNormalizer.cc \
    2625  yat/normalizer/QuantileNormalizer.cc

  • trunk/yat/omic/Makefile

    r2749 r2824  
    1818# along with yat. If not, see <http://www.gnu.org/licenses/>.
    1919
    20 all:; cd ../.. && $(MAKE) yat/omic/libomic.la
     20all:; cd ../.. && $(MAKE) yat/libyat.la

  • trunk/yat/omic/Makefile.am

    r2787 r2824  
    2020# along with yat. If not, see <http://www.gnu.org/licenses/>.
    2121
    22 noinst_LTLIBRARIES += yat/omic/libomic.la
    23 yat_omic_libomic_la_SOURCES =
    24 yat_omic_libomic_la_SOURCES += yat/omic/Codon.cc
    25 yat_omic_libomic_la_SOURCES += yat/omic/DNA.cc
    26 yat_omic_libomic_la_SOURCES += yat/omic/GenomicPosition.cc
    27 yat_omic_libomic_la_SOURCES += yat/omic/GFF.cc
    28 yat_omic_libomic_la_SOURCES += yat/omic/GFF2.cc
    29 yat_omic_libomic_la_SOURCES += yat/omic/GFF3.cc
     22yat_libyat_la_SOURCES += yat/omic/Codon.cc
     23yat_libyat_la_SOURCES += yat/omic/DNA.cc
     24yat_libyat_la_SOURCES += yat/omic/GenomicPosition.cc
     25yat_libyat_la_SOURCES += yat/omic/GFF.cc
     26yat_libyat_la_SOURCES += yat/omic/GFF2.cc
     27yat_libyat_la_SOURCES += yat/omic/GFF3.cc
    3028
    3129nobase_include_HEADERS += $(srcdir)/yat/omic/Codon.h

  • trunk/yat/random/Makefile

    r2749 r2824  
    1818# along with yat. If not, see <http://www.gnu.org/licenses/>.
    1919
    20 all:; cd ../.. && $(MAKE) yat/random/librandom.la
     20all:; cd ../.. && $(MAKE) yat/libyat.la

  • trunk/yat/random/Makefile.am

    r2787 r2824  
    2222# along with yat. If not, see <http://www.gnu.org/licenses/>.
    2323
    24 noinst_LTLIBRARIES += yat/random/librandom.la
    25 yat_random_librandom_la_SOURCES = yat/random/random.cc
     24yat_libyat_la_SOURCES += yat/random/random.cc
    2625
    2726nobase_include_HEADERS += $(srcdir)/yat/random/random.h

  • trunk/yat/regression/Makefile

    r2749 r2824  
    1818# along with yat. If not, see <http://www.gnu.org/licenses/>.
    1919
    20 all:; cd ../.. && $(MAKE) yat/regression/libregression.la
     20all:; cd ../.. && $(MAKE) yat/libyat.la

  • trunk/yat/regression/Makefile.am

    r2787 r2824  
    2222# along with yat. If not, see <http://www.gnu.org/licenses/>.
    2323
    24 noinst_LTLIBRARIES += yat/regression/libregression.la
    25 yat_regression_libregression_la_SOURCES = \
     24yat_libyat_la_SOURCES += \
    2625  yat/regression/AkimaInterpolation.cc  \
    2726  yat/regression/AkimaPeriodicInterpolation.cc \

  • trunk/yat/statistics/Makefile

    r2749 r2824  
    1818# along with yat. If not, see <http://www.gnu.org/licenses/>.
    1919
    20 all:; cd ../.. && $(MAKE) yat/statistics/libstatistics.la
     20all:; cd ../.. && $(MAKE) yat/libyat.la

  • trunk/yat/statistics/Makefile.am

    r2809 r2824  
    2222# along with yat. If not, see <http://www.gnu.org/licenses/>.
    2323
    24 noinst_LTLIBRARIES += yat/statistics/libstatistics.la
    25 yat_statistics_libstatistics_la_SOURCES = \
     24yat_libyat_la_SOURCES += \
    2625  yat/statistics/AUC.cc yat/statistics/Averager.cc \
    2726  yat/statistics/Averager1.cc \

  • trunk/yat/utility/Makefile

    r2749 r2824  
    1818# along with yat. If not, see <http://www.gnu.org/licenses/>.
    1919
    20 all:; cd ../.. && $(MAKE) yat/utility/libutility.la
     20all:; cd ../.. && $(MAKE) yat/libyat.la

  • trunk/yat/utility/Makefile.am

    r2815 r2824  
    2121# along with yat. If not, see <http://www.gnu.org/licenses/>.
    2222
    23 noinst_LTLIBRARIES += yat/utility/libutility.la
    24 yat_utility_libutility_la_SOURCES = \
     23yat_libyat_la_SOURCES += \
    2524  yat/utility/Aligner.cc \
    2625  yat/utility/Alignment.cc \
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