Changeset 2884 for trunk/yat/omic/BamRead.h
- Timestamp:
- Dec 4, 2012, 3:17:22 AM (10 years ago)
- File:
-
- 1 edited
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trunk/yat/omic/BamRead.h
r2883 r2884 67 67 68 68 \see samtools 69 70 \since New in yat 0.10 69 71 */ 70 72 class BamRead … … 226 228 \return \c true if read is soft clipped, either left_soft_clipped 227 229 or right_soft_clipped. 230 231 \since New in yat 0.10 228 232 */ 229 233 bool soft_clipped(const BamRead& bam); … … 232 236 If read is soft clipped on left side, return how many bases are 233 237 clipped, otherwise return 0. 238 239 \since New in yat 0.10 234 240 */ 235 241 uint32_t left_soft_clipped(const BamRead& bam); … … 238 244 If read is soft clipped on right side, return how many bases are 239 245 clipped, otherwise return 0. 246 247 \since New in yat 0.10 240 248 */ 241 249 uint32_t right_soft_clipped(const BamRead& bam); … … 245 253 246 254 \see BamRead::name() 255 256 \since New in yat 0.10 247 257 */ 248 258 bool same_query_name(const BamRead& lhs, const BamRead& rhs); … … 253 263 254 264 \see BamRead 265 266 \since New in yat 0.10 255 267 */ 256 268 struct BamLessPos … … 272 284 273 285 \see BamRead 286 287 \since New in yat 0.10 274 288 */ 275 289 struct BamLessEnd
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