Changeset 2928 for branches/0.10-stable/yat/omic/BamRead.cc

Timestamp:

Dec 26, 2012, 12:20:10 AM (9 years ago)

Author:

Peter

Message:

Support different styles of including bam header files: <bam.h>,
<bam/bam.h>, and <samtools/bam.h>. Style is identified at configure
time and stored in generated 'config_public.h' by defining either
HAVE_BAM_H, HAVE_BAM_BAM_H or HAVE_SAMTOOLS_BAM_H. For convenience,
macros YAT_[B|S]AM_HEADER are defined in 'config_bam.h' that can be
used as '#include YAT_[B|S]AB_HEADER' rather than '#include
<[b|s]am.h'.

File:

• branches/0.10-stable/yat/omic/BamRead.cc (modified) (1 diff)

branches/0.10-stable/yat/omic/BamRead.cc

@@ -19 +19 @@
 
 #include "BamRead.h"
-
-#include <bam.h>
+#include "config_bam.h"
+
+#include YAT_BAM_HEADER
 
 #include <algorithm>