Changeset 2962

Timestamp:

Jan 21, 2013, 2:38:20 AM (9 years ago)

Author:

Peter

Message:

fixes #743

Location:

branches/0.10-stable

Files:

• NEWS (modified) (1 diff)
• test/bam_iterator.cc (modified) (1 diff)
• yat/omic/BamRead.cc (modified) (1 diff)

branches/0.10-stable/NEWS

@@ -6 +6 @@
 
 version 0.10.2 (released NOT YET)
+  - BamRead::mtid(void) is now implemented (see bug #743)
 
   A complete list of closed tickets can be found here [[br]]

branches/0.10-stable/test/bam_iterator.cc

@@ -76 +76 @@
     if (lhs.pos() != rhs.pos())
       return false;
+    if (lhs.mtid() != rhs.mtid())
+      return false;
+    if (lhs.mpos() != rhs.mpos())
+      return false;
     if (lhs.core().bin != rhs.core().bin)
       return false;

branches/0.10-stable/yat/omic/BamRead.cc

@@ -185 +185 @@
 
 
+  int32_t BamRead::mtid(void) const
+  {
+    assert(bam_);
+    return bam_->core.mtid;
+  }
+
 
   int32_t BamRead::mpos(void) const