Changeset 3026 for trunk/test/bam.cc

Timestamp:

Apr 6, 2013, 9:31:02 AM (10 years ago)

Author:

Peter

Message:

add function to modify a base quality (BamRead?). refs #746

File:

• trunk/test/bam.cc (modified) (1 diff)

trunk/test/bam.cc

@@ -129 +129 @@
                 << " expected " << 8 << "\n";
   }
+  uint8_t q = bam.qual(24);
+  if (q != 72) {
+    suite.add(false);
+    suite.err() << "error: quality: " << static_cast<int>(q)
+                << " expected " << 72 << "\n";
+  }
+  uint8_t new_q = 60;
+  bam.qual(24, new_q);
+  q = bam.qual(24);
+  if (q != new_q) {
+    suite.add(false);
+    suite.err() << "error: quality: " << static_cast<int>(q)
+                << " expected " << new_q << "\n";
+  }
   test_cigar(suite, bam, in.header());
 }