Ignore:
Timestamp:
Aug 1, 2013, 5:16:44 AM (8 years ago)
Author:
Peter
Message:

Fixes #766

Replace #defines HAVE_BAM_H (and friends) in
yat/utility/config_public.h with #defines YAT_HAVE_BAM_H (and
friends). Update logic in yat/omic/config_bam.h accordingly as well as
test code in libbam detection.

File:
1 edited

Legend:

Unmodified
Added
Removed
  • trunk/yat/omic/config_bam.h

    r2990 r3068  
    3434#include "yat/utility/config_public.h"
    3535
    36 #ifdef HAVE_BAM_H
     36#ifdef YAT_HAVE_BAM_H
    3737# define YAT_BAM_HEADER "bam.h"
    3838# define YAT_SAM_HEADER "sam.h"
    3939#else
    40 # ifdef HAVE_BAM_BAM_H
     40# ifdef YAT_HAVE_BAM_BAM_H
    4141#  define YAT_BAM_HEADER "bam/bam.h"
    4242#  define YAT_SAM_HEADER "bam/sam.h"
    4343# else
    44 #  ifdef HAVE_SAMTOOLS_BAM_H
     44#  ifdef YAT_HAVE_SAMTOOLS_BAM_H
    4545#   define YAT_BAM_HEADER "samtools/bam.h"
    4646#   define YAT_SAM_HEADER "samtools/sam.h"
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