Changeset 3140

Timestamp:

Dec 16, 2013, 11:14:41 AM (10 years ago)

Author:

Peter

Message:

fixes #776 a bug in function BamHeader::tid

Location:

branches/0.11-stable

Files:

• test/Makefile.am (modified) (1 diff)
• test/bam_header2.cc (added)
• yat/omic/BamHeader.cc (modified) (1 diff)

branches/0.11-stable/test/Makefile.am

@@ -45 +45 @@
   test/bam_region_iterator.test \
   test/bam_header.test \
+  test/bam_header2.test \
   test/codon.test test/commandline.test \
   test/concept.test \

branches/0.11-stable/yat/omic/BamHeader.cc

@@ -75 +75 @@
       // hash get populated.
       int tid, b, e;
-      bam_parse_region(header_, target_name(0), &tid, &b, &e);
+      bam_parse_region(header_, name.c_str(), &tid, &b, &e);
       assert(header_->hash);
       assert(tid == bam_get_tid(header_, name.c_str()));