Changeset 3336 for trunk/yat/omic/Pileup.h
- Timestamp:
- Oct 25, 2014, 1:27:45 AM (8 years ago)
- File:
-
- 1 edited
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trunk/yat/omic/Pileup.h
r3335 r3336 24 24 25 25 #include "BamRead.h" 26 #include "CigarIterator.h" 27 26 27 #include "yat/utility/CigarIterator.h" 28 28 #include "yat/utility/yat_assert.h" 29 29 … … 137 137 // index of base pointed to 138 138 size_t qpos_; 139 CigarIteratorcigar_;139 yat::utility::CigarIterator<const uint32_t*> cigar_; 140 140 size_t skip_; 141 141 // return 0, 1, 2, or 3 see bam_cigar_type in yat/utility/Cigar.h
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