Ignore:
Timestamp:
Oct 25, 2014, 1:27:45 AM (7 years ago)
Author:
Peter
Message:

closes #816

File:
1 edited

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  • trunk/yat/omic/Pileup.h

    r3335 r3336  
    2424
    2525#include "BamRead.h"
    26 #include "CigarIterator.h"
    27 
     26
     27#include "yat/utility/CigarIterator.h"
    2828#include "yat/utility/yat_assert.h"
    2929
     
    137137      // index of base pointed to
    138138      size_t qpos_;
    139       CigarIterator cigar_;
     139      yat::utility::CigarIterator<const uint32_t*> cigar_;
    140140      size_t skip_;
    141141      // return 0, 1, 2, or 3 see bam_cigar_type in yat/utility/Cigar.h
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