Changeset 3410 for trunk/test/data/foo.sam

Timestamp:

Apr 22, 2015, 1:05:43 AM (8 years ago)

Author:

Peter

Message:

add two new functions read_group and program_group to access data in BamHeader?. closes #817

File:

• trunk/test/data/foo.sam (modified) (1 diff)

trunk/test/data/foo.sam

@@ -83 +83 @@
 @SQ SN:GL000225.1 LN:211173
 @SQ SN:GL000192.1 LN:547496
+@RG ID:foo  PL:ILLUMINA SM:Tumour
 @PG ID:bwa  PN:bwa  VN:0.6.1-r104
 1403:1816-0 83  2 24819 60  100M  = 24506 -413  GCCTCTCATAGAATGCCAGGCGCCCCTGTGTTTGTCTCAGTGTCTCCAGCTTGAATTGCTTCACCCCGGCGAAGCAATGCTGCTCCTCTCTCCTGCATGG  DDD_DDbfi_hDehfihDDDfcgDeeeihD`cdegbige_Wiicihihdegiddhhiheaiia]ifh_hihicOhTidgIiiffhiff`aghiiiihihi  XT:A:U  NM:i:0  SM:i:37 AM:i:37 X0:i:1  X1:i:0  XM:i:0  XO:i:0  XG:i:0  MD:Z:100