Ignore:
Timestamp:
Apr 22, 2015, 1:05:43 AM (8 years ago)
Author:
Peter
Message:

add two new functions read_group and program_group to access data in BamHeader?. closes #817

File:
1 edited

Legend:

Unmodified
Added
Removed
  • trunk/test/data/foo.sam

    r2888 r3410  
    8383@SQ SN:GL000225.1 LN:211173
    8484@SQ SN:GL000192.1 LN:547496
     85@RG ID:foo  PL:ILLUMINA SM:Tumour
    8586@PG ID:bwa  PN:bwa  VN:0.6.1-r104
    86871403:1816-0 83  2 24819 60  100M  = 24506 -413  GCCTCTCATAGAATGCCAGGCGCCCCTGTGTTTGTCTCAGTGTCTCCAGCTTGAATTGCTTCACCCCGGCGAAGCAATGCTGCTCCTCTCTCCTGCATGG  DDD_DDbfi_hDehfihDDDfcgDeeeihD`cdegbige_Wiicihihdegiddhhiheaiia]ifh_hihicOhTidgIiiffhiff`aghiiiihihi  XT:A:U  NM:i:0  SM:i:37 AM:i:37 X0:i:1  X1:i:0  XM:i:0  XO:i:0  XG:i:0  MD:Z:100
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