Changeset 3478 for trunk/yat/omic/BamHeader.cc

Timestamp:

Mar 10, 2016, 2:28:15 AM (8 years ago)

Author:

Peter

Message:

assert on memory failures

File:

• trunk/yat/omic/BamHeader.cc (modified) (1 diff)

trunk/yat/omic/BamHeader.cc

@@ -233 +233 @@
     header_ = sam_hdr_parse(txt.size(), txt.c_str());
 #endif
+    // FIXME, handle failures more gracefully than two assertions
+    // below. If allocations fail, the header should be pristine and
+    // an exception be thrown.
+    assert(header_);
     header_->l_text = txt.size();
     header_->text = (char*)realloc(header_->text, txt.size()+1);
+    assert(header_->text);
     memcpy(header_->text, txt.c_str(), txt.size()+1);
 #ifndef YAT_HAVE_HTSLIB