Changeset 3628


Ignore:
Timestamp:
Mar 8, 2017, 8:42:41 AM (6 years ago)
Author:
Peter
Message:

merge release 0.14.2 into trunk

Location:
trunk
Files:
5 edited

Legend:

Unmodified
Added
Removed
  • trunk

  • trunk/NEWS

    r3623 r3628  
    1010
    1111yat 0.14.x series from http://dev.thep.lu.se/yat/svn/branches/0.14-stable
     12
     13version 0.14.2 (released 8 March 2017)
     14  - Bug fixed in omic::dna_reverse_complement_copy (see bug #886)
     15
     16  A complete list of closed tickets can be found here [[br]]
     17  http://dev.thep.lu.se/yat/query?status=closed&milestone=yat+0.14.2
    1218
    1319version 0.14.1 (released 8 February 2017)
  • trunk/m4/version.m4

    r3623 r3628  
    8383# yat-0.14   11:0:0
    8484# yat-0.14.1 11:1:0
     85# yat-0.14.2 11:2:0
    8586#
    8687# *Accidently, the libtool number was not updated for yat 0.5
  • trunk/test/dna_reverse_complement.cc

    r3517 r3628  
    22
    33/*
    4   Copyright (C) 2016 Peter Johansson
     4  Copyright (C) 2016, 2017 Peter Johansson
    55
    66  This file is part of the yat library, http://dev.thep.lu.se/yat
     
    3535  test::Suite suite(argc, argv);
    3636
     37  std::string random("ACGTATATATAGG");
     38  // test that reverse complement (in-place) and copy version yield same results
     39  std::string result1(random);
     40  dna_reverse_complement(result1.begin(), result1.end());
     41  std::string result2;
     42  dna_reverse_complement_copy(random.begin(), random.end(),
     43                              std::back_inserter(result2));
     44  if (result1 != result2) {
     45    suite.add(false);
     46    suite.err() << "input: " << random << "\n";
     47    suite.err() << "dna_reverse_complement: " << result1 << "\n";
     48    suite.err() << "dna_reverse_complement_copy: " << result2 << "\n";
     49  }
     50
    3751  if (false) { // do not run compiler tests
    3852    using namespace boost::iterator_archetypes;
  • trunk/yat/omic/algorithm.h

    r3550 r3628  
    55
    66/*
    7   Copyright (C) 2012, 2013, 2014, 2016 Peter Johansson
     7  Copyright (C) 2012, 2013, 2014, 2016, 2017 Peter Johansson
    88
    99  This file is part of the yat library, http://dev.thep.lu.se/yat
     
    190190    BOOST_CONCEPT_ASSERT((boost_concepts::BidirectionalTraversal<BidirectionalIterator>));
    191191
    192     dna_complement(boost::make_reverse_iterator(begin),
    193                    boost::make_reverse_iterator(end), out);
     192    dna_complement(boost::make_reverse_iterator(end),
     193                   boost::make_reverse_iterator(begin), out);
    194194  }
    195195
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