Changeset 680 for trunk/test/alignment_test.cc
- Timestamp:
- Oct 11, 2006, 7:49:03 PM (16 years ago)
- File:
-
- 1 edited
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trunk/test/alignment_test.cc
r675 r680 36 36 #include <vector> 37 37 38 using namespace theplu ;38 using namespace theplu::yat; 39 39 40 40 void read_vector(std::vector<double>& v,std::string& str) … … 75 75 const std::vector<double>& l2, 76 76 const double sigma, 77 theplu:: utility::matrix& dot_matrix,77 theplu::yat::utility::matrix& dot_matrix, 78 78 std::vector<std::pair<size_t,size_t> >& path) 79 79 { 80 dot_matrix = theplu:: utility::matrix(l1.size(),l2.size());80 dot_matrix = theplu::yat::utility::matrix(l1.size(),l2.size()); 81 81 for (size_t i=0; i<l1.size(); i++) 82 82 for (size_t j=0; j<l2.size(); j++) { … … 85 85 dot_matrix(i,j)=match(l1[i],l2[j],sigma); 86 86 } 87 return theplu:: utility::alignment::NeedlemanWunsch(dot_matrix,path,0);87 return theplu::yat::utility::NeedlemanWunsch(dot_matrix,path,0); 88 88 } 89 89
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