Changeset 680 for trunk/yat/utility
- Timestamp:
- Oct 11, 2006, 7:49:03 PM (16 years ago)
- Location:
- trunk/yat/utility
- Files:
-
- 27 edited
Legend:
- Unmodified
- Added
- Removed
-
trunk/yat/utility/Alignment.cc
r675 r680 22 22 */ 23 23 24 #include " yat/utility/Alignment.h"25 #include " yat/utility/matrix.h"24 #include "Alignment.h" 25 #include "matrix.h" 26 26 27 27 #include <utility> … … 29 29 30 30 namespace theplu { 31 namespace yat { 31 32 namespace utility { 32 namespace alignment {33 33 34 34 double NeedlemanWunsch(const utility::matrix& s, … … 82 82 } 83 83 84 }}} // of namespace alignment namespace utility and namespacetheplu84 }}} // of namespace utility, yat and theplu -
trunk/yat/utility/Alignment.h
r675 r680 1 #ifndef _theplu_ utility_alignment_2 #define _theplu_ utility_alignment_1 #ifndef _theplu_yat_utility_alignment_ 2 #define _theplu_yat_utility_alignment_ 3 3 4 4 // $Id$ … … 29 29 30 30 namespace theplu { 31 namespace yat { 32 namespace utility { 31 33 32 namespace utility {33 34 class matrix; 34 }35 36 namespace utility {37 namespace alignment {38 35 39 36 /// … … 61 58 const double gap); 62 59 63 }}} // of namespace alignment namespace utility and namespacetheplu60 }}} // of namespace utility, yat and theplu 64 61 65 62 #endif -
trunk/yat/utility/CommandLine.cc
r675 r680 1 // $Id$1 // $Id$ 2 2 3 3 /* … … 35 35 36 36 namespace theplu { 37 namespace yat { 37 38 namespace utility { 38 39 … … 292 293 } 293 294 294 }} // of namespace svm_ensemble and namespacetheplu295 }}} // of namespace utility, yat and theplu -
trunk/yat/utility/CommandLine.h
r679 r680 1 #ifndef _theplu_ utility_commandline_2 #define _theplu_ utility_commandline_1 #ifndef _theplu_yat_utility_commandline_ 2 #define _theplu_yat_utility_commandline_ 3 3 4 4 //$Id$ … … 35 35 36 36 namespace theplu { 37 namespace yat { 37 38 namespace utility { 38 39 … … 248 249 std::list<Option*> options_; 249 250 std::vector<std::string> arguments_; 250 251 251 }; 252 252 253 253 254 }} // end of namespace utility and namespace theplu 255 256 #endif 257 258 259 260 254 }}} // end of namespace utility, yat and theplu 255 256 #endif -
trunk/yat/utility/Exception.h
r675 r680 1 #ifndef _theplu_ utility_exception_2 #define _theplu_ utility_exception_1 #ifndef _theplu_yat_utility_exception_ 2 #define _theplu_yat_utility_exception_ 3 3 4 4 // $Id$ … … 30 30 31 31 namespace theplu { 32 namespace yat { 32 33 namespace utility { 33 34 … … 51 52 52 53 53 }} // of namespace utility and namespacetheplu54 }}} // of namespace utility, yat and theplu 54 55 55 56 #endif -
trunk/yat/utility/FileIO.cc
r675 r680 24 24 */ 25 25 26 #include " yat/utility/FileIO.h"26 #include "FileIO.h" 27 27 28 28 #include <iostream> … … 31 31 32 32 namespace theplu { 33 namespace yat { 33 34 namespace utility { 34 35 … … 56 57 } 57 58 58 }} // of namespace utility and namespacetheplu59 }}} // of namespace utility, yat and theplu -
trunk/yat/utility/FileIO.h
r675 r680 1 #ifndef _theplu_yat_utility_fileio_ 2 #define _theplu_yat_utility_fileio_ 3 1 4 // $Id$ 2 5 … … 24 27 */ 25 28 26 #ifndef _theplu_utility_fileio_27 #define _theplu_utility_fileio_28 29 29 #include <string> 30 30 … … 32 32 33 33 namespace theplu { 34 namespace yat { 34 35 namespace utility { 35 36 … … 71 72 }; 72 73 73 }} // of namespace utility and namespacetheplu74 }}} // of namespace utility, yat and theplu 74 75 75 76 #endif -
trunk/yat/utility/NNI.cc
r675 r680 24 24 */ 25 25 26 #include "yat/utility/NNI.h" 27 28 #include "yat/utility/stl_utility.h" 26 #include "NNI.h" 27 #include "stl_utility.h" 29 28 30 29 #include <algorithm> … … 32 31 #include <fstream> 33 32 34 35 33 namespace theplu { 34 namespace yat { 36 35 namespace utility { 37 36 … … 94 93 95 94 96 }} // of namespace utility and namespacetheplu95 }}} // of namespace utility, yat and theplu -
trunk/yat/utility/NNI.h
r675 r680 1 #ifndef _theplu_ utility_nni_2 #define _theplu_ utility_nni_1 #ifndef _theplu_yat_utility_nni_ 2 #define _theplu_yat_utility_nni_ 3 3 4 4 // $Id$ … … 27 27 */ 28 28 29 #include " yat/utility/matrix.h"29 #include "matrix.h" 30 30 31 31 #include <iostream> … … 34 34 35 35 namespace theplu { 36 namespace yat { 36 37 namespace utility { 37 38 … … 146 147 }; 147 148 148 }} // of namespace utility and namespacetheplu149 }}} // of namespace utility, yat and theplu 149 150 150 151 #endif -
trunk/yat/utility/Option.cc
r675 r680 29 29 30 30 namespace theplu { 31 namespace yat { 31 32 namespace utility { 32 33 … … 60 61 } 61 62 62 } // end of namespace utility 63 } // end of namespace theplu 63 }}} // of namespace utility, yat and theplu -
trunk/yat/utility/Option.h
r675 r680 1 #ifndef _theplu_ utility_option_2 #define _theplu_ utility_option_1 #ifndef _theplu_yat_utility_option_ 2 #define _theplu_yat_utility_option_ 3 3 4 4 // $Id$ … … 27 27 #include <string> 28 28 29 30 29 namespace theplu { 30 namespace yat { 31 31 namespace utility { 32 32 … … 107 107 }; 108 108 109 110 111 112 } // end of namespace utility 113 } // end of namespace theplu 109 }}} // of namespace utility, yat and theplu 114 110 115 111 #endif -
trunk/yat/utility/PCA.cc
r675 r680 22 22 */ 23 23 24 #include " yat/utility/PCA.h"25 #include " yat/utility/SVD.h"24 #include "PCA.h" 25 #include "SVD.h" 26 26 27 27 #include <iostream> … … 30 30 31 31 namespace theplu { 32 namespace yat { 32 33 namespace utility { 33 34 … … 199 200 200 201 201 }} // of namespace utility and namespacetheplu202 }}} // of namespace utility, yat and theplu -
trunk/yat/utility/PCA.h
r675 r680 1 #ifndef _theplu_ utility_pca_2 #define _theplu_ utility_pca_1 #ifndef _theplu_yat_utility_pca_ 2 #define _theplu_yat_utility_pca_ 3 3 4 4 // $Id$ … … 25 25 */ 26 26 27 #include " yat/utility/matrix.h"28 #include " yat/utility/vector.h"27 #include "matrix.h" 28 #include "vector.h" 29 29 30 30 namespace theplu { 31 namespace yat { 31 32 namespace utility { 32 33 … … 135 136 136 137 137 }} // of namespace utility and namespacetheplu138 }}} // of namespace utility, yat and theplu 138 139 139 140 #endif -
trunk/yat/utility/SVD.cc
r675 r680 22 22 */ 23 23 24 #include "yat/utility/SVD.h" 25 24 #include "SVD.h" 26 25 27 26 namespace theplu { 27 namespace yat { 28 28 namespace utility { 29 29 … … 66 66 67 67 68 }} // of namespace utility and namespacetheplu68 }}} // of namespace utility, yat and theplu -
trunk/yat/utility/SVD.h
r675 r680 1 #ifndef _theplu_ utility_svd_2 #define _theplu_ utility_svd_1 #ifndef _theplu_yat_utility_svd_ 2 #define _theplu_yat_utility_svd_ 3 3 4 4 // $Id$ … … 25 25 */ 26 26 27 #include " yat/utility/matrix.h"28 #include " yat/utility/vector.h"27 #include "matrix.h" 28 #include "vector.h" 29 29 30 30 #include <gsl/gsl_linalg.h> 31 31 32 32 namespace theplu { 33 namespace yat { 33 34 namespace utility { 34 35 … … 140 141 }; 141 142 142 }} // of namespace utility and namespacetheplu143 }}} // of namespace utility, yat and theplu 143 144 144 145 #endif -
trunk/yat/utility/WeNNI.cc
r675 r680 24 24 */ 25 25 26 #include "yat/utility/WeNNI.h" 27 28 #include "yat/utility/matrix.h" 29 #include "yat/utility/stl_utility.h" 26 #include "WeNNI.h" 27 #include "matrix.h" 28 #include "stl_utility.h" 30 29 31 30 #include <algorithm> … … 34 33 35 34 namespace theplu { 35 namespace yat { 36 36 namespace utility { 37 37 … … 87 87 88 88 89 }} // of namespace utility and namespacetheplu89 }}} // of namespace utility, yat and theplu -
trunk/yat/utility/WeNNI.h
r675 r680 1 #ifndef _theplu_ utility_wenni_2 #define _theplu_ utility_wenni_1 #ifndef _theplu_yat_utility_wenni_ 2 #define _theplu_yat_utility_wenni_ 3 3 4 4 // $Id$ … … 27 27 */ 28 28 29 #include "yat/utility/NNI.h" 30 31 #include "yat/utility/matrix.h" 29 #include "NNI.h" 30 #include "matrix.h" 32 31 33 32 #include <iostream> 34 33 35 36 37 34 namespace theplu { 35 namespace yat { 38 36 namespace utility { 39 37 … … 76 74 }; 77 75 78 }} // of namespace utility and namespacetheplu76 }}} // of namespace utility, yat and theplu 79 77 80 78 #endif -
trunk/yat/utility/kNNI.cc
r675 r680 24 24 */ 25 25 26 #include " yat/utility/kNNI.h"27 #include " yat/utility/stl_utility.h"26 #include "kNNI.h" 27 #include "stl_utility.h" 28 28 29 29 #include <algorithm> … … 33 33 34 34 namespace theplu { 35 namespace yat { 35 36 namespace utility { 36 37 … … 90 91 91 92 92 }} // of namespace utility and namespacetheplu93 }}} // of namespace utility, yat and theplu -
trunk/yat/utility/kNNI.h
r675 r680 1 #ifndef _theplu_ utility_knni_2 #define _theplu_ utility_knni_1 #ifndef _theplu_yat_utility_knni_ 2 #define _theplu_yat_utility_knni_ 3 3 4 4 // $Id$ … … 27 27 */ 28 28 29 #include " yat/utility/NNI.h"29 #include "NNI.h" 30 30 31 31 #include <iostream> … … 33 33 34 34 namespace theplu { 35 namespace yat { 35 36 namespace utility { 36 37 … … 65 66 }; 66 67 67 }} // of namespace utility and namespacetheplu68 }}} // of namespace utility, yat and theplu 68 69 69 70 #endif -
trunk/yat/utility/matrix.cc
r675 r680 24 24 */ 25 25 26 #include "yat/utility/matrix.h" 27 28 #include "yat/utility/vector.h" 29 #include "yat/utility/stl_utility.h" 30 #include "yat/utility/utility.h" 26 #include "matrix.h" 27 #include "vector.h" 28 #include "stl_utility.h" 29 #include "utility.h" 31 30 32 31 #include <cmath> … … 36 35 #include <gsl/gsl_blas.h> 37 36 38 39 37 namespace theplu { 38 namespace yat { 40 39 namespace utility { 41 40 … … 241 240 242 241 243 }} // of namespace utility and namespacethep242 }}} // of namespace utility, yat and thep -
trunk/yat/utility/matrix.h
r675 r680 1 #ifndef _theplu_ utility_matrix_2 #define _theplu_ utility_matrix_1 #ifndef _theplu_yat_utility_matrix_ 2 #define _theplu_yat_utility_matrix_ 3 3 4 4 // $Id$ … … 28 28 */ 29 29 30 #include " yat/utility/vector.h"31 #include " yat/utility/Exception.h"30 #include "vector.h" 31 #include "Exception.h" 32 32 33 33 #include <gsl/gsl_matrix.h> … … 35 35 36 36 namespace theplu { 37 namespace yat { 37 38 namespace utility { 38 39 … … 463 464 464 465 465 }} // of namespace utility and namespacetheplu466 }}} // of namespace utility, yat and theplu 466 467 467 468 #endif -
trunk/yat/utility/stl_utility.cc
r675 r680 23 23 */ 24 24 25 #include " yat/utility/stl_utility.h"26 #include " yat/utility/utility.h"25 #include "stl_utility.h" 26 #include "utility.h" 27 27 28 28 #include <iostream> … … 33 33 34 34 namespace theplu { 35 namespace yat { 35 36 namespace utility { 36 37 … … 102 103 } 103 104 104 }} // end of namespace utility and namespacethep105 }}} // end of namespace utility, yat and thep -
trunk/yat/utility/stl_utility.h
r675 r680 1 #ifndef _theplu_ utility_stl_utility_2 #define _theplu_ utility_stl_utility_1 #ifndef _theplu_yat_utility_stl_utility_ 2 #define _theplu_yat_utility_stl_utility_ 3 3 4 4 // $Id$ … … 54 54 55 55 namespace theplu { 56 namespace yat { 56 57 namespace utility { 57 58 … … 133 134 134 135 135 }} // of namespace utility and namespacetheplu136 }}} // of namespace utility, yat and theplu 136 137 137 138 #endif -
trunk/yat/utility/utility.cc
r675 r680 23 23 */ 24 24 25 #include "yat/utility/utility.h" 26 25 #include "utility.h" 26 #include "stl_utility.h" 27 #include "vector.h" 27 28 #include "yat/random/random.h" 28 #include "yat/utility/stl_utility.h"29 #include "yat/utility/vector.h"30 29 31 30 #include <sstream> … … 33 32 34 33 namespace theplu { 34 namespace yat { 35 35 namespace utility { 36 36 … … 116 116 117 117 118 }} // end of namespace utility and namespacethep118 }}} // end of namespace utility, yat and thep -
trunk/yat/utility/utility.h
r675 r680 1 #ifndef _theplu_ utility_utility_2 #define _theplu_ utility_utility_1 #ifndef _theplu_yat_utility_utility_ 2 #define _theplu_yat_utility_utility_ 3 3 4 4 // $Id$ … … 29 29 /// @file utility/utility.h 30 30 /// 31 /// Some useful functions are placed here31 /// @brief Some useful functions are placed here 32 32 /// 33 33 … … 37 37 38 38 namespace theplu { 39 namespace yat { 39 40 namespace utility { 40 41 … … 82 83 83 84 84 }} // of namespace utility and namespacetheplu85 }}} // of namespace utility, yat and theplu 85 86 86 87 #endif -
trunk/yat/utility/vector.cc
r675 r680 25 25 */ 26 26 27 #include "yat/utility/vector.h" 28 #include "yat/utility/matrix.h" 29 #include "yat/utility/stl_utility.h" 30 #include "yat/utility/utility.h" 31 27 #include "vector.h" 28 #include "matrix.h" 29 #include "stl_utility.h" 30 #include "utility.h" 32 31 33 32 #include <iostream> … … 36 35 #include <utility> 37 36 38 39 37 namespace theplu { 38 namespace yat { 40 39 namespace utility { 41 40 … … 264 263 265 264 266 }} // of namespace utility and namespacethep265 }}} // of namespace utility, yat and thep -
trunk/yat/utility/vector.h
r675 r680 1 #ifndef _theplu_ utility_vector_2 #define _theplu_ utility_vector_1 #ifndef _theplu_yat_utility_vector_ 2 #define _theplu_yat_utility_vector_ 3 3 4 4 // $Id$ … … 28 28 */ 29 29 30 #include " yat/utility/Exception.h"30 #include "Exception.h" 31 31 32 32 #include <iostream> … … 38 38 39 39 namespace theplu { 40 namespace yat { 40 41 namespace utility { 41 42 … … 490 491 491 492 492 }} // of namespace utility and namespacetheplu493 }}} // of namespace utility, yat and theplu 493 494 494 495 #endif
Note: See TracChangeset
for help on using the changeset viewer.