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Diff Rev Age Author Log Message
(edit) @877   14 years Markus Ringnér This revision breaks the vector_test. I know this is against the rules …
(edit) @876   14 years Jari Häkkinen Added missing #include <cassert>
(edit) @875   14 years Peter rewriting SW algo, making code clearer, and perhaps removing a few bugs...?
(edit) @874   14 years Markus Ringnér Fixes ticket:237
(edit) @873   14 years Peter fixing some docs
(edit) @872   14 years Peter Some docs for TypeInfo?
(edit) @871   14 years Peter minor docs fix
(edit) @870   14 years Peter After re-installing yat, the issue vanished, so here is the test for …
(edit) @869   14 years Peter Adding Smith-Waterman local alignment and modified ssearch to use this …
(edit) @868   14 years Peter fixes ticket:236
(edit) @867   14 years Peter adding function doing a SSEARCH between two strings
(edit) @866   14 years Markus Ringnér refs #236. EnsembleBuilder::predict bug fixed for matrix-based …
(edit) @865   14 years Peter changing URL to http://trac.thep.lu.se/trac/yat
(edit) @864   14 years Markus Ringnér Added a lot of tests to feature_selection_test
(edit) @863   14 years Markus Ringnér Fixed bug in FeatureSelectorIR that resulted in incorrect results!.
(edit) @862   14 years Markus Ringnér Fixed bug in InputRanker? that sometimes gave rise to a bus error …
(edit) @861   14 years Peter adding class to store and compare std::type_info
(edit) @860   14 years Peter fixes #149 - Target constructor from Target and vector<string>
(edit) @859   14 years Peter updated copyright
(edit) @858   14 years Peter refs #148 in EnsembleBuilder?
(edit) @857   14 years Peter refs #148 in NCC
(edit) @856   14 years Markus Ringnér The SNR score is now ok again and renamed SNRScore. Fixes #235"
(edit) @855   14 years Peter trac has moved to http://trac.thep.lu.se/trac/yat
(edit) @854   15 years Peter updated svndigest config file
(edit) @853   15 years Peter svndigest config file
(edit) @852   15 years Jari Häkkinen Fixes #228.
(edit) @851   15 years Jari Häkkinen Fixes #229.
(edit) @850   15 years Peter fixes #227
(edit) @849   15 years Jari Häkkinen Removing obsolete branch.
(edit) @848   15 years Jari Häkkinen Merged log:/branches/0.3.1#838:846 to trunk.
(edit) @847   15 years Jari Häkkinen Tagging release 0.3.1
(edit) @846   15 years Jari Häkkinen Bumped version number.
(edit) @845   15 years Jari Häkkinen Added contact information to readme.
(edit) @844   15 years Peter Fixes #122 and refs #123
(edit) @843   15 years Peter Fixes #221. regression_test fails on peter@lev (see refs #222), yet I …
(edit) @842   15 years Peter fixed typo in error msg
(edit) @841   15 years Jari Häkkinen Addresses #222. Comparing doubles with == is poor programming style.
(edit) @840   15 years Jari Häkkinen Addresses #222. Comparing doubles with == is poor programming style.
(edit) @839   15 years Jari Häkkinen Fixes #220. A couple of #includes where wrong.
(edit) @838   15 years Jari Häkkinen Bug fix branch for release 0.3
(edit) @837   15 years Peter Fixed include to be correct also when being case-sensitive. refs #220
(edit) @836   15 years Jari Häkkinen Bumped version number.
(edit) @835   15 years Jari Häkkinen Tagging release 0.3.
(edit) @834   15 years Jari Häkkinen Bumped version number.
(edit) @833   15 years Jari Häkkinen Addresses #217. Fixed so that 'make distcheck' compiles but tests fail …
(edit) @832   15 years Peter Refs #217 cleaning up makefile.am
(edit) @831   15 years Peter Refs #185.
(edit) @830   15 years Jari Häkkinen Fixes #206.
(edit) @829   15 years Jari Häkkinen Fixes #173.
(edit) @828   15 years Peter Generalized ConsenusInputRanker?, Fixes #151
(edit) @827   15 years Peter added Functors to be used in CIR. Refs #151
(edit) @826   15 years Peter documentation and some minor fixes Fixes #135
(edit) @825   15 years Peter removed minmax functions and moved shuffle into vector.*
(edit) @824   15 years Peter Moved Ensemble stuff in subset_egnerator_test to ensemble_test. Also …
(edit) @823   15 years Peter BootstrapSampler?. Fixes #134
(edit) @822   15 years Peter redesigned tTest fixes #212 and #156
(edit) @821   15 years Peter Modified ROC class to use AUC class in calculation of ROC area. Refs #101
(edit) @820   15 years Peter Changed name again. ROCScore is now called AUC. Also fixed several …
(edit) @819   15 years Peter
(edit) @818   15 years Peter It depends on the use case here, but I think I agree so hist_ is no …
(edit) @817   15 years Peter Fixes #143
(edit) @816   15 years Peter test for Distance. Fixes #198
(edit) @815   15 years Peter added constructor for DataLookup1D from a utility::vector
(edit) @814   15 years Peter fixes #66
(edit) @813   15 years Peter Predict in NBC. Fixes #57
(edit) @812   15 years Peter implemented NBC predict. Have to check what happens in the weighted …
(edit) @811   15 years Peter dox
(edit) @810   15 years Jari Häkkinen Changed to obey the general wisdom: If you write the same code snipet …
(edit) @809   15 years Jari Häkkinen Fixed spelling.
(edit) @808   15 years Peter previous argument was invalid, but here is an implementation. Fixes #205
(edit) @807   15 years Peter Ok, no comments from enyone so I assume it is ok to remove the list of …
(edit) @806   15 years Peter removed test as well :O
(edit) @805   15 years Peter removed Option and Commandline. Not mature enough for a release. …
(edit) @804   15 years Peter Creating a Sandbox
(edit) @803   15 years Peter removed Microarray namespce and its conents
(edit) @802   15 years Peter removed styles sheet in config
(edit) @801   15 years Peter and forgot another thing
(edit) @800   15 years Peter
(edit) @799   15 years Peter NOTE: you will probably need to rerun configure to create directory …
(edit) @798   15 years Jari Häkkinen Removed unnecessary #include. Added tests for random number distributions.
(edit) @797   15 years Jari Häkkinen Fixes #191. This is the best that can be done with the current design.
(edit) @796   15 years Jari Häkkinen Fixes #201.
(edit) @795   15 years Peter confusing to use argv[0] since it is nout test/vector_test but rather …
(edit) @794   15 years Peter making yat compile
(edit) @793   15 years Jari Häkkinen Fixes #193. Last test for the new functionality added to matrix.
(edit) @792   15 years Jari Häkkinen Addresses #193. matrix now works as outlined in the ticket discussion. …
(edit) @791   15 years Jari Häkkinen Addresses #193. Added missing implementations.
(edit) @790   15 years Jari Häkkinen Addresses #193. Fixing doxygen docs, and operator=.
(edit) @789   15 years Jari Häkkinen Addresses #193. vector now works as outlined here. Added some …
(edit) @788   15 years Jari Häkkinen Improved comparison operator and equal function doxygen doc. Added for …
(edit) @787   15 years Peter removed v_const in vector since it never used for anything but only …
(edit) @786   15 years Peter added a test in vector_test
(edit) @785   15 years Peter I think it is clearer if gsl_vector_const_view is declared as const …
(edit) @784   15 years Jari Häkkinen References #155. Removed potential null pointer usage. Some unwanted …
(edit) @783   15 years Jari Häkkinen Fixes #155. Added asserts to check vectors in all non-const functions …
(edit) @782   15 years Jari Häkkinen Fixes #195.
(edit) @781   15 years Peter changing name to ROCScore and also added some cassert includes
(edit) @780   15 years Jari Häkkinen Fixed exception message.
(edit) @779   15 years Peter Refs #101
(edit) @778   15 years Peter added ROCscore class. refs #101
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