|
|
@4030
|
3 years |
Peter |
preparing release 0.18.1
|
|
|
@4029
|
3 years |
Peter |
extend the tests show what the comparison functors take as argument; …
|
|
|
@4028
|
3 years |
Peter |
fixes #970
|
|
|
@4020
|
3 years |
Peter |
bump version to 0.18.1pre
|
|
|
@4017
|
3 years |
Peter |
correct date format
|
|
|
@4016
|
3 years |
Peter |
updating copyright years
|
|
|
@4015
|
3 years |
Peter |
Preparing release 0.18
|
|
|
@4014
|
3 years |
Peter |
prefer std::shared_ptr over boost
|
|
|
@4013
|
3 years |
Peter |
fix test failure when srcdir was absolute path
|
|
|
@4012
|
3 years |
Peter |
../$(scrdir) does not work when srcdir is an absolute path
|
|
|
@4008
|
3 years |
Peter |
Remove Distribution class and its daughter classes. It used …
|
|
|
@4007
|
3 years |
Peter |
There was a typo that yat_result was first set to "non required" and …
|
|
|
@4006
|
3 years |
Peter |
fix bug that doxygen.config was not updated when set of input files …
|
|
|
@4002
|
3 years |
Peter |
Creating a private branch for refactoring of KendallScore? (refs #710)
|
|
|
@4000
|
3 years |
Peter |
New stable branch 0.18
|
|
|
@3989
|
3 years |
Peter |
there is no default sf_user; make the text reflect that.
|
|
|
@3988
|
3 years |
Peter |
bumping version to 0.17.3pre
|
|
|
@3985
|
3 years |
Peter |
update copyright years
|
|
|
@3984
|
3 years |
Peter |
Preparing release 0.17.2
|
|
|
@3981
|
3 years |
Peter |
cater for c++98
|
|
|
@3979
|
3 years |
Peter |
fix distcheck (refs #954)
|
|
|
@3978
|
3 years |
Peter |
leftover (refs #954)
|
|
|
@3976
|
3 years |
Peter |
mention #955 in NEWS
|
|
|
@3975
|
3 years |
Peter |
fixes #955.
The correction term involving count_triple() was not …
|
|
|
@3974
|
3 years |
Peter |
remove a dead declaration in test::SUite class and improve docs of …
|
|
|
@3973
|
3 years |
Peter |
add dependency for lazycheck (refs #955)
|
|
|
@3972
|
3 years |
Peter |
add test data for statistics::Kendall (refs #955)
|
|
|
@3971
|
3 years |
Peter |
fixes #956. Vector::resize(0) did not work when the vector was …
|
|
|
@3967
|
3 years |
Peter |
fix leftover issues for r3965 (refs #954) caught by distcheck: …
|
|
|
@3965
|
3 years |
Peter |
fixes #954. Avoid reading config file from stdin with doxygen.
|
|
|
@3952
|
3 years |
Peter |
required version is sufficient
|
|
|
@3951
|
3 years |
Peter |
update copyright years
|
|
|
@3950
|
3 years |
Peter |
Double-quote 2nd argument in YAT_SET_CONTAINS to allow expansion of …
|
|
|
@3942
|
3 years |
Peter |
Same change as r3932 in trunk. Config variable PERL_PATH is obsolete …
|
|
|
@3941
|
3 years |
Peter |
Change doxygen test. Rather than SKIP when doxygen 1.8.[15-17] is …
|
|
|
@3940
|
3 years |
Peter |
update copyright years
|
|
|
@3935
|
3 years |
Peter |
avoid compiler warning about catching polymorphic type by value
|
|
|
@3931
|
3 years |
Peter |
bump version to 0.17.2pre
|
|
|
@3928
|
3 years |
Peter |
correct format of date in NEWS file
|
|
|
@3927
|
3 years |
Peter |
preparing release 0.17.1
|
|
|
@3923
|
3 years |
Peter |
fixes #942; getvector now clears the passed vector<T> before …
|
|
|
@3892
|
4 years |
Peter |
fixes #942
|
|
|
@3877
|
4 years |
Peter |
add NEWS section for 0.17.1
|
|
|
@3876
|
4 years |
Peter |
bump version to 0.17.1pre
|
|
|
@3873
|
4 years |
Peter |
updating copyright years
|
|
|
@3872
|
4 years |
Peter |
Preparing release 0.17
|
|
|
@3869
|
4 years |
Peter |
fix bug in GFF output operator
|
|
|
@3868
|
4 years |
Peter |
extend test
|
|
|
@3864
|
4 years |
Peter |
fixes #937
|
|
|
@3863
|
4 years |
Peter |
initialise member variables properly; refs #936
|
|
|
@3862
|
4 years |
Peter |
skip test for doxygen version range 1.8.15 - 1.8.17.
|
|
|
@3861
|
4 years |
Peter |
fix grammar in docs
|
|
|
@3860
|
4 years |
Peter |
fixes #935. Require lvalue access in Percentiler and change tests to …
|
|
|
@3859
|
4 years |
Peter |
avoid warning about ignored return value
|
|
|
@3858
|
4 years |
Peter |
fixes #934. bam_hdr_destroy is inlined in htslib 1.10 which causing …
|
|
|
@3856
|
4 years |
Peter |
New stable branch 0.17
|
|
|
@3852
|
4 years |
Peter |
bump version to 0.16.4pre
|
|
|
@3849
|
4 years |
Peter |
Preparing release 0.16.3
|
|
|
@3842
|
4 years |
Peter |
fixes #931
|
|
|
@3841
|
4 years |
Peter |
update Version to 0.16.3pre
|
|
|
@3838
|
4 years |
Peter |
update copyright years
|
|
|
@3837
|
4 years |
Peter |
preparing release 0.16.2
|
|
|
@3836
|
4 years |
Peter |
fixes #928
|
|
|
@3835
|
4 years |
Peter |
fixes #929
|
|
|
@3834
|
4 years |
Peter |
test bug #928 (refs #928).
|
|
|
@3833
|
4 years |
Peter |
bumping VERSION to 0.16.2pre
|
|
|
@3830
|
4 years |
Peter |
Preparing release 0.16.1
|
|
|
@3829
|
4 years |
Peter |
fixes #927. PriorityQueue? used an std::set internally, which meant it …
|
|
|
@3824
|
4 years |
Peter |
Bump version to 0.16.1pre
|
|
|
@3820
|
4 years |
Peter |
update copyright years
|
|
|
@3818
|
4 years |
Peter |
Preparing release 0.16
|
|
|
@3817
|
4 years |
Peter |
Preparing release 0.16
|
|
|
@3810
|
4 years |
Peter |
avoid compiler warning: comparison betwen signed and unsigned integer …
|
|
|
@3808
|
4 years |
Peter |
Move the data member of the JobHandler? into its own data class, …
|
|
|
@3807
|
4 years |
Peter |
improve docs
|
|
|
@3799
|
4 years |
Peter |
scoped_ptr<VcfHeader?> needs access to class declaration to compile
|
|
|
@3798
|
4 years |
Peter |
allow user to turn off doxygen
|
|
|
@3797
|
4 years |
Peter |
fix typo in include logic so source compiles when samtools header …
|
|
|
@3795
|
4 years |
Peter |
New stable branch 0.16
|
|
|
@3744
|
5 years |
Peter |
bump VERSION to 0.15.2pre
|
|
|
@3741
|
5 years |
Peter |
update copyright years
|
|
|
@3740
|
5 years |
Peter |
preparing release 0.15.1
|
|
|
@3739
|
5 years |
Peter |
fixes #908
|
|
|
@3737
|
5 years |
Peter |
Fix typo/bug that GSL_error that the closing bracket was misplaced in …
|
|
|
@3714
|
6 years |
Peter |
bumping version to 0.15.1pre
|
|
|
@3711
|
6 years |
Peter |
correct release date
|
|
|
@3710
|
6 years |
Peter |
prepare release 0.15
|
|
|
@3708
|
6 years |
Peter |
remove empty line
|
|
|
@3706
|
6 years |
Peter |
New stable branch 0.15
|
|
|
@3699
|
6 years |
Peter |
bump version to 0.14.5pre
|
|
|
@3696
|
6 years |
Peter |
updating copyright years
|
|
|
@3695
|
6 years |
Peter |
preparing release 0.14.4
|
|
|
@3676
|
6 years |
Peter |
InBamFile::n_mapped(tid) and InBamFile::n_unmapped(tid) threw an …
|
|
|
@3675
|
6 years |
Peter |
Default constructor for BamWriteIterator? was not implemented (fixes #894).
|
|
|
@3667
|
6 years |
Peter |
closes #893 that dirname("") caused an assertion, and also fixed bug …
|
|
|
@3638
|
6 years |
Peter |
fix typo
|
|
|
@3637
|
7 years |
Peter |
bump version to 0.14.4pre
|
|
|
@3634
|
7 years |
Peter |
update copyright years
|
|
|
@3633
|
7 years |
Peter |
Preparing release 0.14.3
|
|
|
@3632
|
7 years |
Peter |
Changes to cater for API changes in HTSlib 1.4 (see r3630 and
r3631). …
|
|
|