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Diff Rev Age Author Log Message
(edit) @4038   2 years Peter merge trunk into branch
(edit) @4037   2 years Peter skeleton for new Ranking container. refs #710.
(edit) @4033   2 years Peter bumping version to 0.18.2pre
(edit) @4030   2 years Peter preparing release 0.18.1
(edit) @4029   2 years Peter extend the tests show what the comparison functors take as argument; …
(edit) @4028   2 years Peter fixes #970
(edit) @4020   2 years Peter bump version to 0.18.1pre
(edit) @4017   2 years Peter correct date format
(edit) @4016   2 years Peter updating copyright years
(edit) @4015   2 years Peter Preparing release 0.18
(edit) @4014   2 years Peter prefer std::shared_ptr over boost
(edit) @4013   2 years Peter fix test failure when srcdir was absolute path
(edit) @4012   2 years Peter ../$(scrdir) does not work when srcdir is an absolute path
(edit) @4008   2 years Peter Remove Distribution class and its daughter classes. It used …
(edit) @4007   2 years Peter There was a typo that yat_result was first set to "non required" and …
(edit) @4006   2 years Peter fix bug that doxygen.config was not updated when set of input files …
(edit) @4002   2 years Peter Creating a private branch for refactoring of KendallScore? (refs #710)
(edit) @4000   2 years Peter New stable branch 0.18
(edit) @3989   3 years Peter there is no default sf_user; make the text reflect that.
(edit) @3988   3 years Peter bumping version to 0.17.3pre
(edit) @3985   3 years Peter update copyright years
(edit) @3984   3 years Peter Preparing release 0.17.2
(edit) @3981   3 years Peter cater for c++98
(edit) @3979   3 years Peter fix distcheck (refs #954)
(edit) @3978   3 years Peter leftover (refs #954)
(edit) @3976   3 years Peter mention #955 in NEWS
(edit) @3975   3 years Peter fixes #955. The correction term involving count_triple() was not …
(edit) @3974   3 years Peter remove a dead declaration in test::SUite class and improve docs of …
(edit) @3973   3 years Peter add dependency for lazycheck (refs #955)
(edit) @3972   3 years Peter add test data for statistics::Kendall (refs #955)
(edit) @3971   3 years Peter fixes #956. Vector::resize(0) did not work when the vector was …
(edit) @3967   3 years Peter fix leftover issues for r3965 (refs #954) caught by distcheck: …
(edit) @3965   3 years Peter fixes #954. Avoid reading config file from stdin with doxygen.
(edit) @3952   3 years Peter required version is sufficient
(edit) @3951   3 years Peter update copyright years
(edit) @3950   3 years Peter Double-quote 2nd argument in YAT_SET_CONTAINS to allow expansion of …
(edit) @3942   3 years Peter Same change as r3932 in trunk. Config variable PERL_PATH is obsolete …
(edit) @3941   3 years Peter Change doxygen test. Rather than SKIP when doxygen 1.8.[15-17] is …
(edit) @3940   3 years Peter update copyright years
(edit) @3935   3 years Peter avoid compiler warning about catching polymorphic type by value
(edit) @3931   3 years Peter bump version to 0.17.2pre
(edit) @3928   3 years Peter correct format of date in NEWS file
(edit) @3927   3 years Peter preparing release 0.17.1
(edit) @3923   3 years Peter fixes #942; getvector now clears the passed vector<T> before …
(edit) @3892   3 years Peter fixes #942
(edit) @3877   3 years Peter add NEWS section for 0.17.1
(edit) @3876   3 years Peter bump version to 0.17.1pre
(edit) @3873   3 years Peter updating copyright years
(edit) @3872   3 years Peter Preparing release 0.17
(edit) @3869   3 years Peter fix bug in GFF output operator
(edit) @3868   3 years Peter extend test
(edit) @3864   3 years Peter fixes #937
(edit) @3863   3 years Peter initialise member variables properly; refs #936
(edit) @3862   3 years Peter skip test for doxygen version range 1.8.15 - 1.8.17.
(edit) @3861   3 years Peter fix grammar in docs
(edit) @3860   3 years Peter fixes #935. Require lvalue access in Percentiler and change tests to …
(edit) @3859   3 years Peter avoid warning about ignored return value
(edit) @3858   3 years Peter fixes #934. bam_hdr_destroy is inlined in htslib 1.10 which causing …
(edit) @3856   3 years Peter New stable branch 0.17
(edit) @3852   3 years Peter bump version to 0.16.4pre
(edit) @3849   3 years Peter Preparing release 0.16.3
(edit) @3842   4 years Peter fixes #931
(edit) @3841   4 years Peter update Version to 0.16.3pre
(edit) @3838   4 years Peter update copyright years
(edit) @3837   4 years Peter preparing release 0.16.2
(edit) @3836   4 years Peter fixes #928
(edit) @3835   4 years Peter fixes #929
(edit) @3834   4 years Peter test bug #928 (refs #928).
(edit) @3833   4 years Peter bumping VERSION to 0.16.2pre
(edit) @3830   4 years Peter Preparing release 0.16.1
(edit) @3829   4 years Peter fixes #927. PriorityQueue? used an std::set internally, which meant it …
(edit) @3824   4 years Peter Bump version to 0.16.1pre
(edit) @3820   4 years Peter update copyright years
(edit) @3818   4 years Peter Preparing release 0.16
(edit) @3817   4 years Peter Preparing release 0.16
(edit) @3810   4 years Peter avoid compiler warning: comparison betwen signed and unsigned integer …
(edit) @3808   4 years Peter Move the data member of the JobHandler? into its own data class, …
(edit) @3807   4 years Peter improve docs
(edit) @3799   4 years Peter scoped_ptr<VcfHeader?> needs access to class declaration to compile
(edit) @3798   4 years Peter allow user to turn off doxygen
(edit) @3797   4 years Peter fix typo in include logic so source compiles when samtools header …
(edit) @3795   4 years Peter New stable branch 0.16
(edit) @3744   5 years Peter bump VERSION to 0.15.2pre
(edit) @3741   5 years Peter update copyright years
(edit) @3740   5 years Peter preparing release 0.15.1
(edit) @3739   5 years Peter fixes #908
(edit) @3737   5 years Peter Fix typo/bug that GSL_error that the closing bracket was misplaced in …
(edit) @3714   5 years Peter bumping version to 0.15.1pre
(edit) @3711   5 years Peter correct release date
(edit) @3710   5 years Peter prepare release 0.15
(edit) @3708   5 years Peter remove empty line
(edit) @3706   5 years Peter New stable branch 0.15
(edit) @3699   5 years Peter bump version to 0.14.5pre
(edit) @3696   5 years Peter updating copyright years
(edit) @3695   5 years Peter preparing release 0.14.4
(edit) @3676   6 years Peter InBamFile::n_mapped(tid) and InBamFile::n_unmapped(tid) threw an …
(edit) @3675   6 years Peter Default constructor for BamWriteIterator? was not implemented (fixes #894).
(edit) @3667   6 years Peter closes #893 that dirname("") caused an assertion, and also fixed bug …
(edit) @3638   6 years Peter fix typo
(edit) @3637   6 years Peter bump version to 0.14.4pre
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