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Diff Rev Age Author Log Message
(edit) @4038   9 months Peter merge trunk into branch
(edit) @4037   9 months Peter skeleton for new Ranking container. refs #710.
(edit) @4033   9 months Peter bumping version to 0.18.2pre
(edit) @4030   9 months Peter preparing release 0.18.1
(edit) @4029   9 months Peter extend the tests show what the comparison functors take as argument; …
(edit) @4028   9 months Peter fixes #970
(edit) @4020   12 months Peter bump version to 0.18.1pre
(edit) @4017   12 months Peter correct date format
(edit) @4016   12 months Peter updating copyright years
(edit) @4015   12 months Peter Preparing release 0.18
(edit) @4014   12 months Peter prefer std::shared_ptr over boost
(edit) @4013   12 months Peter fix test failure when srcdir was absolute path
(edit) @4012   12 months Peter ../$(scrdir) does not work when srcdir is an absolute path
(edit) @4008   12 months Peter Remove Distribution class and its daughter classes. It used …
(edit) @4007   12 months Peter There was a typo that yat_result was first set to "non required" and …
(edit) @4006   12 months Peter fix bug that doxygen.config was not updated when set of input files …
(edit) @4002   12 months Peter Creating a private branch for refactoring of KendallScore? (refs #710)
(edit) @4000   12 months Peter New stable branch 0.18
(edit) @3989   14 months Peter there is no default sf_user; make the text reflect that.
(edit) @3988   14 months Peter bumping version to 0.17.3pre
(edit) @3985   14 months Peter update copyright years
(edit) @3984   14 months Peter Preparing release 0.17.2
(edit) @3981   14 months Peter cater for c++98
(edit) @3979   14 months Peter fix distcheck (refs #954)
(edit) @3978   14 months Peter leftover (refs #954)
(edit) @3976   14 months Peter mention #955 in NEWS
(edit) @3975   14 months Peter fixes #955. The correction term involving count_triple() was not …
(edit) @3974   14 months Peter remove a dead declaration in test::SUite class and improve docs of …
(edit) @3973   14 months Peter add dependency for lazycheck (refs #955)
(edit) @3972   14 months Peter add test data for statistics::Kendall (refs #955)
(edit) @3971   14 months Peter fixes #956. Vector::resize(0) did not work when the vector was …
(edit) @3967   14 months Peter fix leftover issues for r3965 (refs #954) caught by distcheck: …
(edit) @3965   14 months Peter fixes #954. Avoid reading config file from stdin with doxygen.
(edit) @3952   15 months Peter required version is sufficient
(edit) @3951   15 months Peter update copyright years
(edit) @3950   15 months Peter Double-quote 2nd argument in YAT_SET_CONTAINS to allow expansion of …
(edit) @3942   15 months Peter Same change as r3932 in trunk. Config variable PERL_PATH is obsolete …
(edit) @3941   15 months Peter Change doxygen test. Rather than SKIP when doxygen 1.8.[15-17] is …
(edit) @3940   15 months Peter update copyright years
(edit) @3935   15 months Peter avoid compiler warning about catching polymorphic type by value
(edit) @3931   16 months Peter bump version to 0.17.2pre
(edit) @3928   16 months Peter correct format of date in NEWS file
(edit) @3927   16 months Peter preparing release 0.17.1
(edit) @3923   16 months Peter fixes #942; getvector now clears the passed vector<T> before …
(edit) @3892   19 months Peter fixes #942
(edit) @3877   20 months Peter add NEWS section for 0.17.1
(edit) @3876   20 months Peter bump version to 0.17.1pre
(edit) @3873   20 months Peter updating copyright years
(edit) @3872   20 months Peter Preparing release 0.17
(edit) @3869   20 months Peter fix bug in GFF output operator
(edit) @3868   20 months Peter extend test
(edit) @3864   20 months Peter fixes #937
(edit) @3863   20 months Peter initialise member variables properly; refs #936
(edit) @3862   21 months Peter skip test for doxygen version range 1.8.15 - 1.8.17.
(edit) @3861   21 months Peter fix grammar in docs
(edit) @3860   21 months Peter fixes #935. Require lvalue access in Percentiler and change tests to …
(edit) @3859   22 months Peter avoid warning about ignored return value
(edit) @3858   22 months Peter fixes #934. bam_hdr_destroy is inlined in htslib 1.10 which causing …
(edit) @3856   22 months Peter New stable branch 0.17
(edit) @3852   23 months Peter bump version to 0.16.4pre
(edit) @3849   23 months Peter Preparing release 0.16.3
(edit) @3842   2 years Peter fixes #931
(edit) @3841   2 years Peter update Version to 0.16.3pre
(edit) @3838   2 years Peter update copyright years
(edit) @3837   2 years Peter preparing release 0.16.2
(edit) @3836   2 years Peter fixes #928
(edit) @3835   2 years Peter fixes #929
(edit) @3834   2 years Peter test bug #928 (refs #928).
(edit) @3833   2 years Peter bumping VERSION to 0.16.2pre
(edit) @3830   2 years Peter Preparing release 0.16.1
(edit) @3829   2 years Peter fixes #927. PriorityQueue? used an std::set internally, which meant it …
(edit) @3824   2 years Peter Bump version to 0.16.1pre
(edit) @3820   2 years Peter update copyright years
(edit) @3818   2 years Peter Preparing release 0.16
(edit) @3817   2 years Peter Preparing release 0.16
(edit) @3810   2 years Peter avoid compiler warning: comparison betwen signed and unsigned integer …
(edit) @3808   2 years Peter Move the data member of the JobHandler? into its own data class, …
(edit) @3807   2 years Peter improve docs
(edit) @3799   2 years Peter scoped_ptr<VcfHeader?> needs access to class declaration to compile
(edit) @3798   2 years Peter allow user to turn off doxygen
(edit) @3797   2 years Peter fix typo in include logic so source compiles when samtools header …
(edit) @3795   3 years Peter New stable branch 0.16
(edit) @3744   3 years Peter bump VERSION to 0.15.2pre
(edit) @3741   3 years Peter update copyright years
(edit) @3740   3 years Peter preparing release 0.15.1
(edit) @3739   3 years Peter fixes #908
(edit) @3737   3 years Peter Fix typo/bug that GSL_error that the closing bracket was misplaced in …
(edit) @3714   4 years Peter bumping version to 0.15.1pre
(edit) @3711   4 years Peter correct release date
(edit) @3710   4 years Peter prepare release 0.15
(edit) @3708   4 years Peter remove empty line
(edit) @3706   4 years Peter New stable branch 0.15
(edit) @3699   4 years Peter bump version to 0.14.5pre
(edit) @3696   4 years Peter updating copyright years
(edit) @3695   4 years Peter preparing release 0.14.4
(edit) @3676   4 years Peter InBamFile::n_mapped(tid) and InBamFile::n_unmapped(tid) threw an …
(edit) @3675   4 years Peter Default constructor for BamWriteIterator? was not implemented (fixes #894).
(edit) @3667   4 years Peter closes #893 that dirname("") caused an assertion, and also fixed bug …
(edit) @3638   5 years Peter fix typo
(edit) @3637   5 years Peter bump version to 0.14.4pre
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