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@4054
|
14 months |
Peter |
mention modified interface in previous commit
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@4051
|
15 months |
Peter |
make Target::classifier() const; closes #972
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@4032
|
16 months |
Peter |
merge release 0.18.1 into trunk
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@4019
|
19 months |
Peter |
merge 0.18 into trunk
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@4001
|
20 months |
Peter |
Bumping version to 0.19pre
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@3998
|
20 months |
Peter |
Prepare 0.18-stable branch
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@3987
|
21 months |
Peter |
merge release 0.17.2 into trunk
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@3980
|
21 months |
Peter |
fixes #957. NegativeBinomial? now inherits from Multivariate
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@3966
|
22 months |
Peter |
merge changes in 0.17-stable branch (since 0.17.1) into trunk.
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@3960
|
22 months |
Peter |
closes #953. Since we are no longer using libboost_thread (or …
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@3938
|
23 months |
Peter |
let configure fail if compiler is not a C++11 compiler. …
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@3930
|
23 months |
Peter |
merge release 0.17.1 into trunk
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@3922
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2 years |
Peter |
correct typo in NEWS. refs #945.
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@3911
|
2 years |
Peter |
fix typos
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@3907
|
2 years |
Peter |
remove checks for nullptr before calling gsl free function and require …
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@3893
|
2 years |
Peter |
merge latest revision from stable-0.17 branch into trunk
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@3883
|
2 years |
Peter |
remove support for building against libbam (which allows us to remove …
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@3875
|
2 years |
Peter |
merge release 0.17 into trunk
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@3870
|
2 years |
Peter |
merge changes from 0.17-stable branch
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@3857
|
2 years |
Peter |
bumping VERSION to 0.18pre
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@3855
|
2 years |
Peter |
updating copyright statements
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@3854
|
2 years |
Peter |
prepare 0.17-stable branch
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@3851
|
2 years |
Peter |
merge release 0.16.3 into trunk.
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@3840
|
3 years |
Peter |
merge release yat-0.16.2 into trunk
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@3832
|
3 years |
Peter |
merge release 0.16.1 intro trunk
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@3823
|
3 years |
Peter |
Merge release 0.16 into trunk
|
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@3805
|
3 years |
Peter |
mention ticket number in NEWS
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@3804
|
3 years |
Peter |
closes #904; turn on cxx11 features by default
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@3796
|
3 years |
Peter |
bump version to 0.17pre
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@3793
|
3 years |
Peter |
prepare 0.16-stable branch
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@3792
|
3 years |
Peter |
update copyright years
|
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@3784
|
3 years |
Peter |
mention change in macro in NEWS
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@3748
|
4 years |
Peter |
declare SVD constructor explicit; fixes #906
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@3743
|
4 years |
Peter |
merge release 0.15.1 into trunk
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@3713
|
5 years |
Peter |
merge release 0.15 into trunk
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@3707
|
5 years |
Peter |
bumping version to 0.16pre
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@3705
|
5 years |
Peter |
prepare 0.15-stable branch
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@3698
|
5 years |
Peter |
merge release 0.14.4 into trunk
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@3688
|
5 years |
Peter |
refs #897. Mention the problem with GCC4 in NEWS file.
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@3636
|
5 years |
Peter |
merge 0.14.3 into trunk
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@3628
|
5 years |
Peter |
merge release 0.14.2 into trunk
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@3623
|
5 years |
Peter |
merge release 0.14.1 into trunk
move functions 'create_gsl_vector' …
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@3613
|
5 years |
Peter |
mention new configure option, --enable-cxx11, in README (refs #878)
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@3579
|
5 years |
Peter |
merge release 0.14 into trunk
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@3566
|
5 years |
Peter |
bumping version to 0.15pre
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@3564
|
5 years |
Peter |
Prepare 0.14-stable branch
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@3561
|
5 years |
Peter |
Merged release 0.13.1 into trunk
|
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@3550
|
5 years |
Peter |
Update copyright years. Happy New Year
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@3548
|
5 years |
Peter |
The concept 'Distance' now requires that operator() works on iterator …
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@3485
|
6 years |
Peter |
linking against libbam is deprecated; it still works, but users are …
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@3467
|
6 years |
Peter |
add VectorMutable? assignment operator to the API (using already …
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@3459
|
6 years |
Peter |
utility::WeightedIterator? is now always tagged as …
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@3442
|
7 years |
Peter |
mention #841 in NEWS
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@3439
|
7 years |
Peter |
merge release 0.13 into trunk
|
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@3419
|
7 years |
Peter |
bumping version to 0.14pre
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@3417
|
7 years |
Peter |
updating copyright statements
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@3416
|
7 years |
Peter |
prepare 0.13-stable branch
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@3400
|
7 years |
Peter |
refs #794
Deprecate configure option --without-samtools and add new …
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@3393
|
7 years |
Peter |
refs #803
The std::random_access_iterator promises that iterator …
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@3364
|
8 years |
Peter |
describe htslib support in NEWS and README. refs #794
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@3342
|
8 years |
Peter |
merge 0.12.2 into trunk
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@3306
|
8 years |
Peter |
merge ptach release 0.12.1 into trunk
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@3295
|
8 years |
Peter |
merge release 0.12 into trunk
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@3276
|
8 years |
Peter |
ref #803. revert part of r3273 for the same reason as explained in r3275
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@3274
|
8 years |
Peter |
refs #803. record r3273 in NEWS
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@3266
|
8 years |
Peter |
fixes #802
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@3259
|
8 years |
Peter |
deprecated class Range. closes #786
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@3254
|
8 years |
Peter |
fixes #799
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@3220
|
8 years |
Peter |
bump version to 0.13pre
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@3215
|
8 years |
Peter |
Prepare 0.12-stable branch
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@3208
|
8 years |
Peter |
record r3207 in NEWS
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@3188
|
8 years |
Peter |
merge patch release 0.11.2
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@3157
|
8 years |
Peter |
NEWS: record that GetlineIterator? constructor is declared explicit …
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@3144
|
8 years |
Peter |
merge patch release 0.11.1 into trunk
|
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@3130
|
9 years |
Peter |
merge release 0.11 into trunk
|
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@3117
|
9 years |
Peter |
Bump version to 0.12pre
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@3115
|
9 years |
Peter |
Prepare 0.11-stable branch
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@3098
|
9 years |
Peter |
merge release 0.10.3 into trunk
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@3068
|
9 years |
Peter |
Fixes #766
Replace #defines HAVE_BAM_H (and friends) in …
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@3056
|
9 years |
Peter |
fixes #764: throw if region in BamReadIterator? is invalid
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@3024
|
9 years |
Peter |
fixes #755
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@3023
|
9 years |
Peter |
closes #754. ROC::area() is now const
|
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@3018
|
9 years |
Peter |
merge patch release 0.10.2 into trunk
|
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@3006
|
9 years |
Peter |
deprecate ROC::p_value, first versions of p_left and p_right (refs …
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@3005
|
9 years |
Peter |
refs #689. Deprecate PearsonCorrelation::p_value_one_sided. Replace it …
|
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@3004
|
9 years |
Peter |
refs #689. Deprecate Fisher::one_sided_p; implement Fisher::left_p and …
|
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@2960
|
9 years |
Peter |
merge patch release 0.10.1 into trunk
|
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@2943
|
9 years |
Peter |
merge release 0.10 into trunk
|
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@2921
|
9 years |
Peter |
bump version to 0.11pre
|
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@2918
|
9 years |
Peter |
prepare new stable release 0.10
|
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@2916
|
9 years |
Peter |
merge patch release 0.9.2 into trunk. Ignore changes in …
|
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|
@2853
|
10 years |
Peter |
merge patch release 0.9.1 into trunk
|
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|
@2838
|
10 years |
Peter |
merge release 0.9 into trunk
|
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@2823
|
10 years |
Peter |
bumping version to 0.10pre
|
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@2821
|
10 years |
Peter |
preparing new stable branch 0.9
|
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@2815
|
10 years |
Peter |
closes #706. Implement a generalization of SmithWaternan? and …
|
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@2798
|
10 years |
Peter |
merge release 0.8.2 into trunk
|
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@2793
|
10 years |
Peter |
mention r2792 in NEWS
|
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@2787
|
10 years |
Peter |
update coyright years
|
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@2783
|
10 years |
Jari Häkkinen |
Addresses #714. Adding note on additional dependency on boost system.
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|