source: trunk/README

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Diff Rev Age Author Log Message
(edit) @3999   21 months Peter update copyright years
(edit) @3939   2 years Peter update README to reflect that C++11 is not optional. closes #949
(edit) @3907   2 years Peter remove checks for nullptr before calling gsl free function and require …
(edit) @3883   2 years Peter remove support for building against libbam (which allows us to remove …
(edit) @3823   3 years Peter Merge release 0.16 into trunk
(edit) @3792   3 years Peter update copyright years
(edit) @3763   4 years Peter refs #905 Some naive tests for class VcfFile?. Also add a test VCF …
(edit) @3734   4 years Peter mention compiler flags prefixed 'YAT_CONFIG_' and 'INTERNAL_' (see r3715)
(edit) @3666   5 years Peter configure.ac: add --disable-cxx11 in --help output Change default …
(edit) @3661   5 years Peter update copyright years
(edit) @3602   5 years Peter doc how to turn on cxx11 features. closes #878
(edit) @3590   5 years Peter change file name to more generic 'yat_cxx11.m4' (laying out the carpet …
(edit) @3581   5 years Peter refs #878 Make configure try to turn on compiler switches (such as …
(edit) @3550   5 years Peter Update copyright years. Happy New Year
(edit) @3500   6 years Peter change README to reflect that we accept samtools v1.2 (again)
(edit) @3496   6 years Peter only use samtools executable, if samtools 1.3 (or newer) is available
(edit) @3492   6 years Peter mention Samtools in header
(edit) @3483   6 years Peter reject older samtools executable (0.1.19 and older)
(edit) @3439   7 years Peter merge release 0.13 into trunk
(edit) @3417   7 years Peter updating copyright statements
(edit) @3364   8 years Peter describe htslib support in NEWS and README. refs #794
(edit) @3114   9 years Peter update copyright years
(edit) @2943   9 years Peter merge release 0.10 into trunk
(edit) @2916   10 years Peter merge patch release 0.9.2 into trunk. Ignore changes in …
(edit) @2870   10 years Peter mention samtools and zlib requirements in README
(edit) @2787   10 years Peter update coyright years
(edit) @2786   10 years Peter update README. mention boost libraries rather than specific Thread Library.
(edit) @2767   10 years Peter look for boost thread library. refs #568
(edit) @2734   10 years Peter remove prefix #!
(edit) @2733   10 years Peter prefix Id tag with #! in order to try Trac excude that line
(edit) @2557   11 years Peter changes in README to reflect that we no longer use doxygen to create …
(edit) @2488   11 years Peter docs are not available in pdf so don't mention pdf in README
(edit) @2451   11 years Peter update copyright years
(edit) @2437   11 years Peter advertise 'make installcheck'
(edit) @2410   11 years Peter minor grammar
(edit) @2213   12 years Peter recommend calling 'make doc' before 'make check'
(edit) @2161   12 years Peter updating copyright years
(edit) @2153   12 years Peter refs #603. Boost 1.35 is now required
(edit) @2129   13 years Peter New configure option 'with-gsl=DIR'. This option also accepts 'no' as …
(edit) @2119   13 years Peter converted files to utf-8. fixes #577
(edit) @2080   13 years Peter Added section in README on how to build universal library on Mac OS X …
(edit) @2066   13 years Peter fixed two typos
(edit) @2029   13 years Peter fixed grammar
(edit) @2028   13 years Peter added a snippet on how to hard-code cbla sinto libyat
(edit) @2019   13 years Peter update README to reflect changes in r2017
(edit) @1939   13 years Peter fixes #529
(edit) @1557   14 years Peter libtool is not needed to build yat (except the shell script that is …
(edit) @1487   14 years Jari Häkkinen Addresses #436. GPL license copy reference should also be updated.
(edit) @1486   14 years Jari Häkkinen Addresses #436.
(edit) @1442   14 years Peter fixes #427 - modified blurp in README on this
(edit) @1437   14 years Peter merge patch release 0.4.2 to trunk. Delta 0.4.2-0.4.1
(edit) @1424   14 years Peter it is a bad habit to set environment variables before calling …
(edit) @1397   14 years Peter fixes #409
(edit) @1371   14 years Peter Adding a README.developer and moving developer specific information …
(edit) @1368   14 years Peter Adding a blip in README that it might be a good idea to turn off the …
(edit) @1353   14 years Peter adding text on infinity in requirements
(edit) @1325   14 years Peter adding info on boost
(edit) @1303   14 years Peter Merged patch release 0.4.1 to the trunk. Delta 0.4.1 - 0.4
(edit) @1287   14 years Peter Fixes #87 - replace cumulative hypergeometric with GSL implementation …
(edit) @1275   14 years Jari Häkkinen Updating copyright statements.
(edit) @1272   14 years Peter added snippet on Documentation in README
(edit) @1262   14 years Jari Häkkinen Addresses #208. Updated list of requirements and restructured the …
(edit) @1214   14 years Peter see r1213
(edit) @1180   14 years Jari Häkkinen Fixed atlas information.
(edit) @1149   14 years Peter remove obsolete empty paragraphs
(edit) @1078   14 years Jari Häkkinen Fixes #118. Removed reset of CXXFLAGS from configure.ac and added info …
(edit) @1061   14 years Jari Häkkinen Addresses #208
(edit) @1059   14 years Jari Häkkinen Addresses #208. Write requirements
(edit) @1055   14 years Peter typo
(edit) @1000   15 years Jari Häkkinen trac moved to new location.
(edit) @953   15 years Jari Häkkinen Addresses #118.
(edit) @865   15 years Peter changing URL to http://trac.thep.lu.se/trac/yat
(edit) @848   15 years Jari Häkkinen Merged log:/branches/0.3.1#838:846 to trunk.
(edit) @831   15 years Peter Refs #185.
(edit) @765   15 years Peter Changed CVS repository to be subversion repository and corrected a typo
(edit) @708   16 years Peter added info on --enable-debug flag in README file.
(edit) @675   16 years Jari Häkkinen References #83. Changing project name to yat. Compilation will fail in …
(edit) @573   16 years Jari Häkkinen Made documentation generation optional, issue 'make doc' for docs …
(edit) @38   18 years Jari Häkkinen * empty log message *
(edit) @10   19 years Peter * empty log message *
(add) @2   19 years Jari Häkkinen Added initial support for automake/autoconf.
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