source: trunk/m4

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Diff Rev Age Author Log Message
(edit) @4042   15 months Peter upgrade to autoconf-archive-2021.02.19
(edit) @4032   16 months Peter merge release 0.18.1 into trunk
(edit) @4019   19 months Peter merge 0.18 into trunk
(edit) @4003   20 months Peter Add a constructor Aligner::Cigar(string) (closes #962) Add a function …
(edit) @4001   20 months Peter Bumping version to 0.19pre
(edit) @3999   20 months Peter update copyright years
(edit) @3987   21 months Peter merge release 0.17.2 into trunk
(edit) @3966   22 months Peter merge changes in 0.17-stable branch (since 0.17.1) into trunk.
(edit) @3960   22 months Peter closes #953. Since we are no longer using libboost_thread (or …
(edit) @3937   23 months Peter refs #949. New macro YAT_CXX11 that tests if compiler is CXX compliant …
(edit) @3930   23 months Peter merge release 0.17.1 into trunk
(edit) @3890   2 years Peter Both HAVE_HTSLIB and have_htslib we AC_SUBST'd with different output, …
(edit) @3886   2 years Peter add missing macros in intstall target; sort files alphabetically
(edit) @3885   2 years Peter Lift out macro YAT_CHECK_HEADERS to its own file, yat_check_header.m4. …
(edit) @3884   2 years Peter fix docs typo
(edit) @3883   2 years Peter remove support for building against libbam (which allows us to remove …
(edit) @3882   2 years Peter correct docs
(edit) @3875   2 years Peter merge release 0.17 into trunk
(edit) @3870   2 years Peter merge changes from 0.17-stable branch
(edit) @3867   2 years Peter allow user to override values from pkg-config
(edit) @3866   2 years Peter new macro to detect plplot library and header files (heavily inspired …
(edit) @3865   2 years Peter new macro YAT_CHECK_LIBS
(edit) @3857   2 years Peter bumping VERSION to 0.18pre
(edit) @3855   2 years Peter updating copyright statements
(edit) @3851   2 years Peter merge release 0.16.3 into trunk.
(edit) @3840   3 years Peter merge release yat-0.16.2 into trunk
(edit) @3832   3 years Peter merge release 0.16.1 intro trunk
(edit) @3821   3 years Peter improve docs
(edit) @3796   3 years Peter bump version to 0.17pre
(edit) @3794   3 years Peter update copyright year
(edit) @3793   3 years Peter prepare 0.16-stable branch
(edit) @3792   3 years Peter update copyright years
(edit) @3791   3 years Peter add missing properties
(edit) @3786   3 years Peter The code snippet in YAT_CXX_THROW_IF_NESTED didn't compile also when …
(edit) @3785   3 years Peter adjust for changes introduced in autoconf-archive-2019.01.06
(edit) @3783   3 years Peter upgrade to autoconf-archive-2019.01.06 also files not used in …
(edit) @3782   3 years Peter upgrade to autoconf-archive-2019.01.06
(edit) @3763   4 years Peter refs #905 Some naive tests for class VcfFile?. Also add a test VCF …
(edit) @3761   4 years Peter refs #905. add configure check for boost library iostream
(edit) @3743   4 years Peter merge release 0.15.1 into trunk
(edit) @3730   4 years Peter new function print_what() to print error message from std::nested_exception
(edit) @3728   4 years Peter New macro YAT_SEARCH_LIBS, similar to AC_SEARCH_LIBS but does not …
(edit) @3720   5 years Peter update to autoconf-archive 2017.09.28
(edit) @3713   5 years Peter merge release 0.15 into trunk
(edit) @3707   5 years Peter bumping version to 0.16pre
(edit) @3698   5 years Peter merge release 0.14.4 into trunk
(edit) @3671   5 years Peter change svncopyright config to warn about missing copyright; add ignore …
(edit) @3666   5 years Peter configure.ac: add --disable-cxx11 in --help output Change default …
(edit) @3661   5 years Peter update copyright years
(edit) @3640   5 years Peter use std::log2 when available
(edit) @3636   5 years Peter merge 0.14.3 into trunk
(edit) @3628   5 years Peter merge release 0.14.2 into trunk
(edit) @3623   5 years Peter merge release 0.14.1 into trunk move functions 'create_gsl_vector' …
(edit) @3591   5 years Peter fixes #877 Generalize YAT_CXX_RVALUE into YAT_CXX_TRY_CXX11 and use …
(edit) @3590   5 years Peter change file name to more generic 'yat_cxx11.m4' (laying out the carpet …
(edit) @3588   5 years Peter refs #878 Modify macro YAT_CHECK_HEADER so it adds …
(edit) @3586   5 years Peter restore CXX to avoid multiple opt ammended
(edit) @3581   5 years Peter refs #878 Make configure try to turn on compiler switches (such as …
(edit) @3566   5 years Peter bumping version to 0.15pre
(edit) @3564   5 years Peter Prepare 0.14-stable branch
(edit) @3561   5 years Peter Merged release 0.13.1 into trunk
(edit) @3497   6 years Peter move tests for htslib and samtools into file 'm4/yat_check_htslib.m4' …
(edit) @3453   6 years Peter closes #839 Simplify code by looping over different cblas …
(edit) @3452   6 years Peter fix typo, leftover from mother code
(edit) @3424   7 years Peter upgrade to autoconf-archive-2015.09.25
(edit) @3419   7 years Peter bumping version to 0.14pre
(edit) @3417   7 years Peter updating copyright statements
(edit) @3416   7 years Peter prepare 0.13-stable branch
(edit) @3415   7 years Peter refs #794 Change logic in configure test looking for libhts/samtools …
(edit) @3378   7 years Peter Use latest version from git repo (patch was approved by archive managers)
(edit) @3367   7 years Peter update to autoconf-archive-2015-02-04. Note that m4/ax_append_flag.m4 …
(edit) @3366   7 years Peter prefer private variables in yat.pc. closes #808
(edit) @3350   8 years Peter Make configure htslib aware. Header detection changed to look for …
(edit) @3342   8 years Peter merge 0.12.2 into trunk
(edit) @3331   8 years Peter update to autoconf-archive 2014.10.15
(edit) @3330   8 years Peter update copyright years
(edit) @3313   8 years Peter Correct syntax so it works in VPATH build. Correct yat-hello source so …
(edit) @3311   8 years Peter append EXTRA_DIST with some m4 files that were missing in dist (only …
(edit) @3308   8 years Peter fixed two more glitches in the new version of 'make …
(edit) @3306   8 years Peter merge ptach release 0.12.1 into trunk
(edit) @3299   8 years Peter fix some glitches in make release-tag-upload rule (found while …
(edit) @3270   8 years Peter When a project has a files that depends on the svn revsion such as …
(edit) @3269   8 years Peter fix some issues in YAT_SVN_RELEASE
(edit) @3268   8 years Peter fix that check-svn-diff exit 1 on success.
(edit) @3267   8 years Peter fix broken make rule 'check-svn-diff'; regressed in r3246
(edit) @3256   8 years Peter prefix DEV_BUILD with YAT_ (or uppercase(PACKAGE_) in general case, so …
(edit) @3246   8 years Peter move some more targets from Makefile.am to macro YAT_SVN_RELEASE. Make …
(edit) @3230   8 years Peter typo
(edit) @3229   8 years Peter translate variables when PACKAGE is not suitable as shell variable or …
(edit) @3226   8 years Peter New macro YAT_HEADER_ASSERT
(edit) @3220   8 years Peter bump version to 0.13pre
(edit) @3215   8 years Peter Prepare 0.12-stable branch
(edit) @3188   8 years Peter merge patch release 0.11.2
(edit) @3171   8 years Peter updated to autoconf-archive-2014.02.28
(edit) @3144   8 years Peter merge patch release 0.11.1 into trunk
(edit) @3130   9 years Peter merge release 0.11 into trunk
(edit) @3117   9 years Peter Bump version to 0.12pre
(edit) @3114   9 years Peter update copyright years
(edit) @3113   9 years Peter change YAT_USE_LIBTOOL_[PUSH|POP] so it only affects the linking tests …
(edit) @3105   9 years Peter upgrade to autoconf-archive-2013-11-01
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