

@1135

15 years 
Peter 
fixes self assignment in Vector  fixes #339



@1134

15 years 
Peter 
using Index class instead of std::vector<size_t>



@1133

15 years 
Peter 
using SmartPtr? in KernelLookup? rather than doing the ref count myself



@1132

15 years 
Peter 
KernelLookup? is not inherited from DataLookup2D  fixes #234



@1131

15 years 
Peter 
adding test for VectorConstView? independance



@1122

15 years 
Peter 
refs #335  Changed so Averager classes are consistently returning NaN …



@1121

15 years 
Peter 
fixes #308



@1120

15 years 
Peter 
vector is now Vector



@1119

15 years 
Peter 
add view_test into TESTS



@1117

15 years 
Peter 
view_test is now builf from 'make check' but not included in check



@1116

15 years 
Peter 



@1114

15 years 
Peter 
adding test program for view provided from Markus.



@1112

15 years 
Markus Ringnér 
Mostly related to #295 and #182



@1111

15 years 
Markus Ringnér 
Peters last revision did not compile. Fixed here



@1107

15 years 
Markus Ringnér 
Ticket #259 fixed for KNN



@1106

15 years 
Peter 
Fixes #316  Index class



@1100

15 years 
Peter 
fixes #313  SVM constructor is void and passing kernel and target in …



@1098

15 years 
Jari Häkkinen 
Fixes #299. Memory leak in matrix was found and removed.



@1095

15 years 
Jari Häkkinen 
Removed obsolete #include statement



@1088

15 years 
Peter 
Closes #247. Removed IteratorWeighted? iterators over weighted …



@1087

15 years 
Peter 
fixes #312 and added passing of data in EB constructors



@1086

15 years 
Peter 
fixes #310



@1084

15 years 
Markus Ringnér 
Adding tests



@1079

15 years 
Peter 
fixes #311



@1076

15 years 
Markus Ringnér 
NCC done for ticket:259



@1075

15 years 
Markus Ringnér 
Fixed bug in test



@1072

15 years 
Peter 
fixes #309



@1062

15 years 
Peter 
redesigning Iterator class to hold a 2D container rather than 1D as …



@1056

15 years 
Peter 
fixes ticket:285



@1054

15 years 
Markus Ringnér 



@1053

15 years 
Markus Ringnér 
File renamed to reflect change from vector_distance to distance



@1052

15 years 
Peter 
name change



@1050

15 years 
Peter 
Simplifying distance structure



@1045

15 years 
Peter 
forgot the test refs #315



@1044

15 years 
Peter 
fixes #315



@1043

15 years 
Peter 
fixing #128  iterators in Averger classes



@1042

15 years 
Peter 
fixes #268  remove return value in SupervisedClassifier::train()



@1039

15 years 
Peter 
fixes #276



@1038

15 years 
Peter 
StrideIterator?  fixes ticket:303



@1031

15 years 
Markus Ringnér 
Fixes #272



@1028

15 years 
Peter 
documentation for VectorConstView? and changing name of view functions …



@1027

15 years 
Peter 
going back to previous design in which view and const_view are in …



@1015

15 years 
Peter 
changing class names vectorView => VectorView? and vectorBase => …



@1013

15 years 
Markus Ringnér 
Adding functionality tests for NCC



@1012

15 years 
Markus Ringnér 
Fixed bug in weighted euclidean distance calculation



@1009

15 years 
Peter 
merging branch peterdev into trunk delta 1008:994



@1001

15 years 
Peter 
reset errno to zero when it is an expected error



@1000

15 years 
Jari Häkkinen 
trac moved to new location.



@999

15 years 
Jari Häkkinen 
Copyright statement added.



@988

15 years 
Jari Häkkinen 
Removing potential signed/unsigned clash.



@981

15 years 
Peter 
adding convenient class for help option



@980

15 years 
Peter 
adding possibility to make option required



@979

15 years 
Peter 
fixing bug in OptionFile?. Dont try to create FileUtil? for option not …



@975

15 years 
Peter 
adding Option class for argument associated with a file, and fixed …



@970

15 years 
Peter 
refs #242



@965

15 years 
Peter 
Adding CommandLine? class. finishes #240



@948

15 years 
Markus Ringnér 
Adding support and checks for intended lookups in classifiers



@943

15 years 
Peter 
removing variables not needed and modified AM_INIT_AUTOMAKE to modern form



@932

15 years 
Peter 
median and percentile functions now take iterators rather than vectors



@931

15 years 
Markus Ringnér 
Working on ticket:259. Removed old Distance see ticket:250



@926

15 years 
Markus Ringnér 
Fixing minor mistakes so things gets installed with make install



@925

15 years 
Markus Ringnér 
NCC and IGP have been changed to templates on Distance



@922

15 years 
Jari Häkkinen 
Fixes #190. configure now checks for quite Nan. Check for this removed …



@918

15 years 
Peter 
modifing tests to fit new implementation



@916

15 years 
Peter 
Sorry this commit is a bit to big.
Adding a yat_assert. The yat …



@904

15 years 
Peter 
removing assert from header file



@903

15 years 
Markus Ringnér 
Forgot this test in the last checkin.



@901

15 years 
Markus Ringnér 
Added a template KNN classifier where the distance measure is the …



@900

15 years 
Markus Ringnér 
Refs #251. Fixed so the unweighted distances are at the …



@898

15 years 
Markus Ringnér 
A first suggestion for how to adress #250. Also removed contamination …



@897

15 years 
Peter 
removing keyword that was mistakingly added before



@895

15 years 
Peter 
Another try, hm…



@894

15 years 
Peter 
setting missing property Id on files



@891

15 years 
Markus Ringnér 
Minor modifications



@890

15 years 
Markus Ringnér 
Refs #245 #246 #247



@889

15 years 
Markus Ringnér 
Refs #245. A new structure to calculate distances between vectors that …



@887

15 years 
Peter 
made add function template so it accepts AveragerWeighted? too. Also …



@885

15 years 
Peter 
adding some cleaning



@883

15 years 
Peter 
fixing problems with iterator > const_iterator conversion



@882

15 years 
Peter 
fixing includes  sorry about that



@881

15 years 
Peter 
merged constIterator into Iterator and added an extra template …



@880

15 years 
Peter 
refs #244



@879

15 years 
Markus Ringnér 
Added support to utility::vector for gslfunctions that finds indices …



@877

15 years 
Markus Ringnér 
This revision breaks the vector_test. I know this is against the rules …



@875

15 years 
Peter 
rewriting SW algo, making code clearer, and perhaps removing a few bugs...?



@870

15 years 
Peter 
After reinstalling yat, the issue vanished, so here is the test for …



@869

15 years 
Peter 
Adding SmithWaterman local alignment and modified ssearch to use this …



@867

15 years 
Peter 
adding function doing a SSEARCH between two strings



@865

15 years 
Peter 
changing URL to http://trac.thep.lu.se/trac/yat



@864

15 years 
Markus Ringnér 
Added a lot of tests to feature_selection_test



@862

15 years 
Markus Ringnér 
Fixed bug in InputRanker? that sometimes gave rise to a bus error …



@848

16 years 
Jari Häkkinen 
Merged log:/branches/0.3.1#838:846 to trunk.



@833

16 years 
Jari Häkkinen 
Addresses #217. Fixed so that 'make distcheck' compiles but tests fail …



@831

16 years 
Peter 
Refs #185.



@830

16 years 
Jari Häkkinen 
Fixes #206.



@829

16 years 
Jari Häkkinen 
Fixes #173.



@828

16 years 
Peter 
Generalized ConsenusInputRanker?, Fixes #151



@824

16 years 
Peter 
Moved Ensemble stuff in subset_egnerator_test to ensemble_test. Also …



@822

16 years 
Peter 
redesigned tTest fixes #212 and #156



@821

16 years 
Peter 
Modified ROC class to use AUC class in calculation of ROC area. Refs #101


