

@848

15 years 
Jari Häkkinen 
Merged log:/branches/0.3.1#838:846 to trunk.



@833

15 years 
Jari Häkkinen 
Addresses #217. Fixed so that 'make distcheck' compiles but tests fail …



@831

15 years 
Peter 
Refs #185.



@830

15 years 
Jari Häkkinen 
Fixes #206.



@829

15 years 
Jari Häkkinen 
Fixes #173.



@828

15 years 
Peter 
Generalized ConsenusInputRanker?, Fixes #151



@824

15 years 
Peter 
Moved Ensemble stuff in subset_egnerator_test to ensemble_test. Also …



@822

15 years 
Peter 
redesigned tTest fixes #212 and #156



@821

15 years 
Peter 
Modified ROC class to use AUC class in calculation of ROC area. Refs #101



@820

15 years 
Peter 
Changed name again. ROCScore is now called AUC. Also fixed several …



@819

15 years 
Peter 



@816

15 years 
Peter 
test for Distance. Fixes #198



@814

15 years 
Peter 
fixes #66



@813

15 years 
Peter 
Predict in NBC. Fixes #57



@806

15 years 
Peter 
removed test as well :O



@798

15 years 
Jari Häkkinen 
Removed unnecessary #include. Added tests for random number distributions.



@796

15 years 
Jari Häkkinen 
Fixes #201.



@795

15 years 
Peter 
confusing to use argv[0] since it is nout test/vector_test but rather …



@793

15 years 
Jari Häkkinen 
Fixes #193. Last test for the new functionality added to matrix.



@792

15 years 
Jari Häkkinen 
Addresses #193. matrix now works as outlined in the ticket
discussion. …



@790

15 years 
Jari Häkkinen 
Addresses #193. Fixing doxygen docs, and operator=.



@789

15 years 
Jari Häkkinen 
Addresses #193. vector now works as outlined here. Added some …



@786

15 years 
Peter 
added a test in vector_test



@784

15 years 
Jari Häkkinen 
References #155. Removed potential null pointer usage. Some unwanted …



@782

15 years 
Jari Häkkinen 
Fixes #195.



@781

15 years 
Peter 
changing name to ROCScore and also added some cassert includes



@779

15 years 
Peter 
Refs #101



@775

15 years 
Jari Häkkinen 
Fixes #200.



@774

15 years 
Jari Häkkinen 
Fixes #194.



@762

15 years 
Jari Häkkinen 
Fixes #76. Creating/recreating BLAS support matrix only when needed.



@759

15 years 
Jari Häkkinen 
Fixes #171 and addresses #2. A few more GSL_error exceptions. Removed …



@747

15 years 
Peter 
replaced includes in header files with forward declarations when …



@742

15 years 
Peter 
added test that LinearWeighte? is equal to PolynomialWeighted?(1) fixes #166



@741

15 years 
Peter 
fixes #161 and #164



@740

15 years 
Peter 
added more test in MultiDimWeighted? and moved some stuff to be …



@739

15 years 
Peter 
fixes #178 and removes a bug in MultiDimensional?



@731

15 years 
Peter 
added test for multidimensional weighted and straight version



@730

15 years 
Peter 
fixes #167 and #160



@729

15 years 
Peter 
Fixes #159. Also removed some inlines in OneDimensionalWeighted? by …



@727

15 years 
Peter 
fixes #177



@726

15 years 
Peter 
fixes #165 added test checking Linear Regression is equivalent to …



@724

15 years 
Jari Häkkinen 
Removed redundant #includes.



@723

15 years 
Jari Häkkinen 
Fixes #10. Removed read_to*(std::vector..) functionality.



@722

15 years 
Markus Ringnér 
Closes #129



@712

15 years 
Jari Häkkinen 
Forgot to check in FileUtil? test program.



@711

15 years 
Jari Häkkinen 
Fixes #1 and #80. Interface changed.



@710

15 years 
Jari Häkkinen 
Addresses #1 and #80. Changed FileIO to FileUtil? and added tests on …



@704

15 years 
Markus Ringnér 
Fixes #104. Also fixed inline bug in Averager.h



@702

16 years 
Peter 
Refs #81 moved mse_ to inherited classes and made mse() pure virtual …



@682

16 years 
Jari Häkkinen 
Addresses #153. Moved regression files to .../yat/regression.



@680

16 years 
Jari Häkkinen 
Addresses #153. Introduced yat namespace. Removed alignment namespace. …



@679

16 years 
Markus Ringnér 
Fixed some minor stuff so it compiles on eddie.thep.lu.se running g++3.2



@676

16 years 
Jari Häkkinen 
Fixed #83. This message applies to this revision and
revision:675. …



@675

16 years 
Jari Häkkinen 
References #83. Changing project name to yat. Compilation will fail in …



@669

16 years 
Peter 
#closes #88. SAM score class added



@668

16 years 
Peter 
removing debug code



@667

16 years 
Peter 
refs #151 using Functor now in consensusinputranker to retrieve …



@666

16 years 
Peter 
refs #151, added IRRetreive functors and prepared ConsensusInputRanker? …



@645

16 years 
Markus Ringnér 
Minor things



@644

16 years 
Jari Häkkinen 
Set svndigest:ignore property on test data.



@642

16 years 
Peter 
adding class for selecting features by random



@640

16 years 
Peter 
fixes #132 and #95, and refs #135 replaced bool owner in DataLookup2D …



@634

16 years 
Markus Ringnér 
Fixed NCC predict to work with MatrixLookupWeighted?



@633

16 years 
Markus Ringnér 
Minor fix



@632

16 years 
Markus Ringnér 
Changes in NCC to support weight using MatrixLookupWeighted?. Still …



@628

16 years 
Peter 
fixes #116 and #90 removed classes KernelWeighted_SEV and …



@620

16 years 
Markus Ringnér 
Fixed problems with Averager that sometimes appeared as failures in …



@619

16 years 
Peter 
fixes #107 and refs #105 fixed bug in EnsembleBuilder? and removed some …



@617

16 years 
Jari Häkkinen 
Cleaned up stray gslapi stuff.



@616

16 years 
Jari Häkkinen 
Removed gslapi namespace and put the code into utility namespace.
Move …



@615

16 years 
Peter 
ref #60 NOTE: there is most likely a bug around. I have removed the …



@611

16 years 
Markus Ringnér 
Fixes #100



@609

16 years 
Markus Ringnér 
Fixes #98



@605

16 years 
Peter 
simple test for FeatureSelector?



@604

16 years 
Peter 
ref #96 Changed InputRanker? to return vector of index rather than …



@603

16 years 
Peter 
set properties



@599

16 years 
Peter 
updated corresponding test... well it's not a test it's more of an example.



@594

16 years 
Peter 
closes #91 class parsing commandline



@593

16 years 
Markus Ringnér 
Fixed std includes to compile with g++ 4.1.



@588

16 years 
Markus Ringnér 
Added statistics functions to calculate the higher moments: skewness …



@586

16 years 
Peter 
closes #23 redesign of regression classes



@584

16 years 
Markus Ringnér 
Fixed so NCC and IGP works when there are NaNs? in centroids.



@583

16 years 
Markus Ringnér 
Forgot this one in last check in



@580

16 years 
Jari Häkkinen 
Removed LOCAL_INCLUDES.



@578

16 years 
Jari Häkkinen 
Removed stray file.



@565

16 years 
Peter 
removed default row/column in constructors (MatrixLookup? and DataLookup1D)



@559

16 years 
Peter 
some changes in EB



@554

16 years 
Markus Ringnér 
added small test



@551

16 years 
Markus Ringnér 
Added tests of two nested CrossSplitters? to crossvalidation_test



@538

16 years 
Peter 
corrected test for KernelLookup?



@537

16 years 
Peter 
forked tests and fixed bugs



@536

16 years 
Peter 
fixed problem with ConsensusInputranker?  Now all tests do pass



@534

16 years 
Peter 
bug fixes in MatrixLookup? and extended test



@533

16 years 
Peter 
test for MatrixLookup?. NOTE: consensus_inputranker_test still fails



@527

16 years 
Peter 
Modified Kernel to be built from MatrixLookup? rather than …



@521

16 years 
Peter 
extended target and ensemble tests



@518

16 years 
Peter 
also adding the test for EnsembleBuilder?



@516

16 years 
Peter 
added function generating weight matrix with respect to notanumber …



@514

16 years 
Peter 
generalised binary functionality in Target



@513

16 years 
Peter 
added kernels using weights


