

@883

16 years 
Peter 
fixing problems with iterator > const_iterator conversion



@882

16 years 
Peter 
fixing includes  sorry about that



@881

16 years 
Peter 
merged constIterator into Iterator and added an extra template …



@880

16 years 
Peter 
refs #244



@879

16 years 
Markus Ringnér 
Added support to utility::vector for gslfunctions that finds indices …



@877

16 years 
Markus Ringnér 
This revision breaks the vector_test. I know this is against the rules …



@875

16 years 
Peter 
rewriting SW algo, making code clearer, and perhaps removing a few bugs...?



@870

16 years 
Peter 
After reinstalling yat, the issue vanished, so here is the test for …



@869

16 years 
Peter 
Adding SmithWaterman local alignment and modified ssearch to use this …



@867

16 years 
Peter 
adding function doing a SSEARCH between two strings



@865

16 years 
Peter 
changing URL to http://trac.thep.lu.se/trac/yat



@864

16 years 
Markus Ringnér 
Added a lot of tests to feature_selection_test



@862

16 years 
Markus Ringnér 
Fixed bug in InputRanker? that sometimes gave rise to a bus error …



@848

16 years 
Jari Häkkinen 
Merged log:/branches/0.3.1#838:846 to trunk.



@833

16 years 
Jari Häkkinen 
Addresses #217. Fixed so that 'make distcheck' compiles but tests fail …



@831

16 years 
Peter 
Refs #185.



@830

16 years 
Jari Häkkinen 
Fixes #206.



@829

16 years 
Jari Häkkinen 
Fixes #173.



@828

16 years 
Peter 
Generalized ConsenusInputRanker?, Fixes #151



@824

16 years 
Peter 
Moved Ensemble stuff in subset_egnerator_test to ensemble_test. Also …



@822

16 years 
Peter 
redesigned tTest fixes #212 and #156



@821

16 years 
Peter 
Modified ROC class to use AUC class in calculation of ROC area. Refs #101



@820

16 years 
Peter 
Changed name again. ROCScore is now called AUC. Also fixed several …



@819

16 years 
Peter 



@816

16 years 
Peter 
test for Distance. Fixes #198



@814

16 years 
Peter 
fixes #66



@813

16 years 
Peter 
Predict in NBC. Fixes #57



@806

16 years 
Peter 
removed test as well :O



@798

16 years 
Jari Häkkinen 
Removed unnecessary #include. Added tests for random number distributions.



@796

16 years 
Jari Häkkinen 
Fixes #201.



@795

16 years 
Peter 
confusing to use argv[0] since it is nout test/vector_test but rather …



@793

16 years 
Jari Häkkinen 
Fixes #193. Last test for the new functionality added to matrix.



@792

16 years 
Jari Häkkinen 
Addresses #193. matrix now works as outlined in the ticket
discussion. …



@790

16 years 
Jari Häkkinen 
Addresses #193. Fixing doxygen docs, and operator=.



@789

16 years 
Jari Häkkinen 
Addresses #193. vector now works as outlined here. Added some …



@786

16 years 
Peter 
added a test in vector_test



@784

16 years 
Jari Häkkinen 
References #155. Removed potential null pointer usage. Some unwanted …



@782

16 years 
Jari Häkkinen 
Fixes #195.



@781

16 years 
Peter 
changing name to ROCScore and also added some cassert includes



@779

16 years 
Peter 
Refs #101



@775

16 years 
Jari Häkkinen 
Fixes #200.



@774

16 years 
Jari Häkkinen 
Fixes #194.



@762

16 years 
Jari Häkkinen 
Fixes #76. Creating/recreating BLAS support matrix only when needed.



@759

16 years 
Jari Häkkinen 
Fixes #171 and addresses #2. A few more GSL_error exceptions. Removed …



@747

16 years 
Peter 
replaced includes in header files with forward declarations when …



@742

16 years 
Peter 
added test that LinearWeighte? is equal to PolynomialWeighted?(1) fixes #166



@741

16 years 
Peter 
fixes #161 and #164



@740

16 years 
Peter 
added more test in MultiDimWeighted? and moved some stuff to be …



@739

16 years 
Peter 
fixes #178 and removes a bug in MultiDimensional?



@731

16 years 
Peter 
added test for multidimensional weighted and straight version



@730

16 years 
Peter 
fixes #167 and #160



@729

16 years 
Peter 
Fixes #159. Also removed some inlines in OneDimensionalWeighted? by …



@727

16 years 
Peter 
fixes #177



@726

16 years 
Peter 
fixes #165 added test checking Linear Regression is equivalent to …



@724

16 years 
Jari Häkkinen 
Removed redundant #includes.



@723

16 years 
Jari Häkkinen 
Fixes #10. Removed read_to*(std::vector..) functionality.



@722

16 years 
Markus Ringnér 
Closes #129



@712

16 years 
Jari Häkkinen 
Forgot to check in FileUtil? test program.



@711

16 years 
Jari Häkkinen 
Fixes #1 and #80. Interface changed.



@710

16 years 
Jari Häkkinen 
Addresses #1 and #80. Changed FileIO to FileUtil? and added tests on …



@704

16 years 
Markus Ringnér 
Fixes #104. Also fixed inline bug in Averager.h



@702

16 years 
Peter 
Refs #81 moved mse_ to inherited classes and made mse() pure virtual …



@682

16 years 
Jari Häkkinen 
Addresses #153. Moved regression files to .../yat/regression.



@680

16 years 
Jari Häkkinen 
Addresses #153. Introduced yat namespace. Removed alignment namespace. …



@679

16 years 
Markus Ringnér 
Fixed some minor stuff so it compiles on eddie.thep.lu.se running g++3.2



@676

16 years 
Jari Häkkinen 
Fixed #83. This message applies to this revision and
revision:675. …



@675

16 years 
Jari Häkkinen 
References #83. Changing project name to yat. Compilation will fail in …



@669

16 years 
Peter 
#closes #88. SAM score class added



@668

16 years 
Peter 
removing debug code



@667

16 years 
Peter 
refs #151 using Functor now in consensusinputranker to retrieve …



@666

16 years 
Peter 
refs #151, added IRRetreive functors and prepared ConsensusInputRanker? …



@645

17 years 
Markus Ringnér 
Minor things



@644

17 years 
Jari Häkkinen 
Set svndigest:ignore property on test data.



@642

17 years 
Peter 
adding class for selecting features by random



@640

17 years 
Peter 
fixes #132 and #95, and refs #135 replaced bool owner in DataLookup2D …



@634

17 years 
Markus Ringnér 
Fixed NCC predict to work with MatrixLookupWeighted?



@633

17 years 
Markus Ringnér 
Minor fix



@632

17 years 
Markus Ringnér 
Changes in NCC to support weight using MatrixLookupWeighted?. Still …



@628

17 years 
Peter 
fixes #116 and #90 removed classes KernelWeighted_SEV and …



@620

17 years 
Markus Ringnér 
Fixed problems with Averager that sometimes appeared as failures in …



@619

17 years 
Peter 
fixes #107 and refs #105 fixed bug in EnsembleBuilder? and removed some …



@617

17 years 
Jari Häkkinen 
Cleaned up stray gslapi stuff.



@616

17 years 
Jari Häkkinen 
Removed gslapi namespace and put the code into utility namespace.
Move …



@615

17 years 
Peter 
ref #60 NOTE: there is most likely a bug around. I have removed the …



@611

17 years 
Markus Ringnér 
Fixes #100



@609

17 years 
Markus Ringnér 
Fixes #98



@605

17 years 
Peter 
simple test for FeatureSelector?



@604

17 years 
Peter 
ref #96 Changed InputRanker? to return vector of index rather than …



@603

17 years 
Peter 
set properties



@599

17 years 
Peter 
updated corresponding test... well it's not a test it's more of an example.



@594

17 years 
Peter 
closes #91 class parsing commandline



@593

17 years 
Markus Ringnér 
Fixed std includes to compile with g++ 4.1.



@588

17 years 
Markus Ringnér 
Added statistics functions to calculate the higher moments: skewness …



@586

17 years 
Peter 
closes #23 redesign of regression classes



@584

17 years 
Markus Ringnér 
Fixed so NCC and IGP works when there are NaNs? in centroids.



@583

17 years 
Markus Ringnér 
Forgot this one in last check in



@580

17 years 
Jari Häkkinen 
Removed LOCAL_INCLUDES.



@578

17 years 
Jari Häkkinen 
Removed stray file.



@565

17 years 
Peter 
removed default row/column in constructors (MatrixLookup? and DataLookup1D)



@559

17 years 
Peter 
some changes in EB


