source: trunk/yat/normalizer

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Diff Rev Age Author Log Message
(edit) @2881   11 years Peter Define PP variables in config.h rather than in CPPFLAGS. Include …
(edit) @2824   11 years Peter remove intermediate libraries. Makefiles in corresponding …
(edit) @2787   11 years Peter update coyright years
(edit) @2773   11 years Peter declare HEADERs with srcdir so doxygen understands where to find them …
(edit) @2749   11 years Peter add small convenience Makefiles in subdirs. closes #703
(edit) @2739   11 years Peter refs #703 using a non-recursive Makefile. Old Makefile.am are kept but …
(edit) @2415   12 years Peter improve Centralizer docs. fixes #652
(edit) @2384   12 years Peter updating copyright years
(edit) @2371   12 years Peter adding concept checks in RowNormalizer? and ColumnNormalizer?
(edit) @2284   13 years Peter fix doc typo
(edit) @2283   13 years Peter fix Centralizer so it works with mixed iterators. Make it clear that …
(edit) @2263   13 years Peter adding a class DataIteratorConcept? for concept data iterator. refs #624
(edit) @2224   13 years Peter Lift out rule generating doxygen.mk into one common place …
(edit) @2210   13 years Peter fixes #281. Change all throws of std::runtime_error to …
(edit) @2202   13 years Peter merging release 0.6 into trunk
(edit) @2161   13 years Peter updating copyright years
(edit) @2158   13 years Peter qQuantileNormalizer now works with mixed iterators. closes #498
(edit) @2157   13 years Peter refs #498. Zscore now works with mixed iterators and also refined …
(edit) @2155   13 years Peter Spearman now works with mixed iterators. refs #498
(edit) @2154   13 years Peter using BOOST_CONCEPT_ASSERT. closes #603
(edit) @2152   13 years Peter fix so Spearman works also when input range is weighted and read-only
(edit) @2150   13 years Peter fixes #584
(edit) @2149   13 years Peter fixes #543
(edit) @2148   13 years Peter fixes #582 and refs #583 Claify that normalizer::Spearman requires …
(edit) @2146   13 years Peter fixes #580
(edit) @2141   13 years Peter adding concept Data Iterator. fixes #514
(edit) @2121   13 years Peter updating copyrights to uniform encoding in them.
(edit) @2119   13 years Peter converted files to utf-8. fixes #577
(edit) @2103   14 years Peter merging patch release 0.5.5 into trunk. Delta 0.5.5 - 0.5.4
(edit) @2055   14 years Peter fixed some warnings from gcc 4.3.1 and added some missing includes. …
(edit) @2006   14 years Peter fixes #536. This is the last fix for #536. I don't see how to avoid …
(edit) @2005   14 years Peter simplified code in qQuantileNormalizer - refs #536
(edit) @1954   14 years Jari Häkkinen Merged patch release 0.5.3 to the trunk. Delta 0.5.3 - 0.5.2
(edit) @1942   14 years Peter fixes #537
(edit) @1912   14 years Peter refs #531 - another attempt to make this work on OSX
(edit) @1911   14 years Peter refs #531 - less verbose during 'make doxygen.mk'
(edit) @1909   14 years Peter an attempt to make creation of doxygen.mk more portable. refs #531
(edit) @1905   14 years Peter Revised make dependencies for generating doxygen docs (fixes #438 and …
(edit) @1821   14 years Peter closes #492 - restructure docs because \tparam is not available
(edit) @1820   14 years Peter refs #492. removing unknown cammand (in doxygen 1.5.4) so make check …
(edit) @1819   14 years Jari Häkkinen Replaced N with Q to match Q quantiles.
(edit) @1815   14 years Peter remove leftover
(edit) @1814   14 years Peter Finalized dox for qQuantileNormalizer. Closes #478
(edit) @1813   14 years Peter Changing name of function Partition::index to Partition::quantiles, …
(edit) @1812   14 years Peter working on documentation. refs #478
(edit) @1811   14 years Peter typo
(edit) @1810   14 years Peter working on documentation. refs #478
(edit) @1803   14 years Peter fixed typo - refs #478
(edit) @1802   14 years Peter remove obsolete comment
(edit) @1801   14 years Peter changed template arguments to better describe requirements on passed …
(edit) @1800   14 years Peter fixed normalizer::Gauss so it works with ForwardIterator? as documented
(edit) @1797   14 years Peter updating copyright statements
(edit) @1782   14 years Peter corrected includes and docs
(edit) @1778   14 years Peter refs #478. Fixed so the tests for weighted qQN now are OK. To align …
(edit) @1777   14 years Jari Häkkinen Added missing include statement.
(edit) @1771   14 years Peter rescaling index - refs #478
(edit) @1768   14 years Jari Häkkinen The ends are extrapolated not interpolated.
(edit) @1755   14 years Peter simplify code by using std::ceil - refs #425
(edit) @1751   14 years Peter refs #478 - updated docs and simplified call to data_iterator and …
(edit) @1750   14 years Peter added a compilation test for qQN::operator() with weighted iterators. …
(edit) @1740   14 years Peter addresses #478 - implemented weighted normalization. Need to add test …
(edit) @1739   14 years Peter fixes #479 and removing some debug output
(edit) @1738   14 years Peter added support for creation of an qQuantileNormalizer from a weighted …
(edit) @1737   14 years Peter addresses #478 - preparing for weighted version
(edit) @1736   14 years Peter Changing the interface to work on ranges rather than Matrix. This …
(edit) @1735   14 years Jari Häkkinen Addresses #425. Taking care of some special cases. No iterative test …
(edit) @1733   14 years Jari Häkkinen Improving qQuantileNormalizer docs.
(edit) @1732   14 years Peter typo
(edit) @1731   14 years Jari Häkkinen Addresses #425. 'make check' passes now, but there is still a problem …
(edit) @1718   14 years Jari Häkkinen Addresses #425. Improved docs. Fixed a bug in the normalization.
(edit) @1717   14 years Peter improved(?) docs. Moved some docs from operator() to class docs.
(edit) @1716   14 years Jari Häkkinen Addresses #425. Made class Partitioner private.
(edit) @1715   14 years Peter minor simplification of expression
(edit) @1713   14 years Jari Häkkinen Addresses #425. Added static_cast to get rid of compiler warnings. …
(edit) @1712   14 years Jari Häkkinen Addresses #425. Added linear extrapolation at ends. Added …
(edit) @1711   14 years Peter fixed doxygen warnings
(edit) @1709   14 years Jari Häkkinen Addresses #425. Changed partition function.
(edit) @1708   14 years Jari Häkkinen Addresses #425
(edit) @1579   15 years Peter docs
(edit) @1578   15 years Peter docs
(edit) @1577   15 years Peter docs
(edit) @1576   15 years Jari Häkkinen Added missing $ tag.
(edit) @1575   15 years Jari Häkkinen Added missing $ tag.
(edit) @1568   15 years Jari Häkkinen Addresses #425.
(edit) @1544   15 years Peter making RowNormalizer? and ColumnNormalizer? more general
(edit) @1536   15 years Peter adding a Gauss normalizer
(edit) @1524   15 years Peter fixes #443
(edit) @1523   15 years Peter fixes #442
(edit) @1521   15 years Peter Adding a Zscore normalizer
(edit) @1520   15 years Peter adding a RowNormalizer?
(edit) @1519   15 years Peter speeding up QuantileNormalizer? by avoiding some copying and by only …
(edit) @1518   15 years Peter changed implementation of a couple of normalizer so that operator() …
(edit) @1512   15 years Peter fixes #439 - and also took care of ties
(edit) @1510   15 years Peter fixing docs
(edit) @1509   15 years Peter fixes #437 and added support for having known issues in test::Suite
(edit) @1508   15 years Peter refs #437
(edit) @1507   15 years Peter preparing for weighted version - refs #437
(edit) @1498   15 years Peter fixed bug in ColumnNormalizer?
(copy) @1497   15 years Peter changing name to normalizer - closes #416
copied from trunk/yat/normalization:
(edit) @1493   15 years Peter got problems with yat.am in distcheck - easiest solution was to delete …
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