source: trunk/yat/utility

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Diff Rev Age Author Log Message
(edit) @1037   14 years Peter some msg when using yat_assert
(edit) @1036   14 years Peter fixes #291
(edit) @1029   14 years Peter removing includes not needed
(edit) @1028   14 years Peter documentation for VectorConstView? and changing name of view functions …
(edit) @1027   14 years Peter going back to previous design in which view and const_view are in …
(edit) @1026   14 years Peter not returning const VectorBase?& in vector and VectorView?
(edit) @1017   14 years Peter passing VectorBase? in matrix - refs #256
(edit) @1016   14 years Peter passing VectorBase? in SVD - refs #256
(edit) @1015   14 years Peter changing class names vectorView => VectorView? and vectorBase => …
(edit) @1014   14 years Peter adding convenient classes for options File
(edit) @1011   14 years Peter removing iterator typedef - that functioality is in base class
(edit) @1010   14 years Peter init some pointers to null and removing conflict
(edit) @1009   14 years Peter merging branch peter-dev into trunk delta 1008:994
(edit) @1005   14 years Peter adding conversion function - from string to numerical type
(edit) @1004   14 years Peter adding a wrapper around std::random_shuffle that uses the RNG class. …
(edit) @1003   14 years Peter adding class for Kolmogorov Smirnov test
(edit) @1001   14 years Peter reset errno to zero when it is an expected error
(edit) @1000   14 years Jari Häkkinen trac moved to new location.
(edit) @997   14 years Peter bugfix
(edit) @996   14 years Peter correcting OptionSwitch? so it actually listens to commandline. Also …
(edit) @989   14 years Peter fixed typo
(edit) @986   14 years Peter no comma in help output in case of short flag but no long flag
(edit) @985   14 years Peter minor bug
(edit) @984   14 years Peter implementing refs functions
(edit) @983   14 years Peter typo
(edit) @982   14 years Peter adding description variable for cmd
(edit) @981   14 years Peter adding convenient class for help option
(edit) @980   14 years Peter adding possibility to make option required
(edit) @979   14 years Peter fixing bug in OptionFile?. Dont try to create FileUtil? for option not …
(edit) @978   14 years Peter using std in our vector::shuffle
(edit) @975   14 years Peter adding Option class for argument associated with a file, and fixed …
(edit) @974   14 years Peter improve help output
(edit) @972   14 years Peter well to be correct
(edit) @971   14 years Markus Ringnér Fixed bug so things compile on OS X.
(edit) @968   14 years Peter adding mssing files
(edit) @966   14 years Peter fixing some doxygen warnings
(edit) @965   14 years Peter Adding CommandLine? class. finishes #240
(edit) @958   14 years Peter allowing mixture of weighted and unweighted iterators in vector_distance
(edit) @937   14 years Peter changing name of IteratorTraits? to iterator_traits
(edit) @936   14 years Peter reimplementing yat_assert as a throwing function
(edit) @932   14 years Peter median and percentile functions now take iterators rather than vectors
(edit) @928   14 years Peter removing some includes not needed
(edit) @921   14 years Jari Häkkinen Removed undefined macro on MacOSX. Now the yat_assert compiles.
(edit) @919   14 years Peter fixes #239
(edit) @917   14 years Peter fixes #257
(edit) @916   14 years Peter Sorry this commit is a bit to big. Adding a yat_assert. The yat …
(edit) @914   14 years Peter refactoring add function in Averagers, refs #246
(edit) @910   14 years Peter impl add function for AveragerWeighted?. The function distinguishes …
(edit) @909   14 years Peter using weighted_iterator_traits, closes #151
(edit) @908   14 years Peter adding IteratorWeighted?.h in Makefile.am (so file is included in …
(edit) @899   14 years Peter changed euclidean to fulfill design criteria, removes …
(edit) @898   14 years Markus Ringnér A first suggestion for how to adress #250. Also removed contamination …
(edit) @897   14 years Peter removing keyword that was mistakingly added before
(edit) @896   14 years Peter
(edit) @895   14 years Peter Another try, hm…
(edit) @894   14 years Peter setting missing property Id on files
(edit) @890   14 years Markus Ringnér Refs #245 #246 #247
(edit) @884   14 years Peter some documentation
(edit) @883   14 years Peter fixing problems with iterator -> const_iterator conversion
(edit) @882   14 years Peter fixing includes - sorry about that
(edit) @881   14 years Peter merged constIterator into Iterator and added an extra template …
(edit) @880   14 years Peter refs #244
(edit) @879   14 years Markus Ringnér Added support to utility::vector for gsl-functions that finds indices …
(edit) @878   14 years Markus Ringnér Problem with previous checkin fixed
(edit) @877   14 years Markus Ringnér This revision breaks the vector_test. I know this is against the rules …
(edit) @875   14 years Peter rewriting SW algo, making code clearer, and perhaps removing a few bugs...?
(edit) @873   14 years Peter fixing some docs
(edit) @872   14 years Peter Some docs for TypeInfo?
(edit) @869   14 years Peter Adding Smith-Waterman local alignment and modified ssearch to use this …
(edit) @867   14 years Peter adding function doing a SSEARCH between two strings
(edit) @865   14 years Peter changing URL to http://trac.thep.lu.se/trac/yat
(edit) @861   14 years Peter adding class to store and compare std::type_info
(edit) @842   14 years Peter fixed typo in error msg
(edit) @833   14 years Jari Häkkinen Addresses #217. Fixed so that 'make distcheck' compiles but tests fail …
(edit) @831   15 years Peter Refs #185.
(edit) @830   15 years Jari Häkkinen Fixes #206.
(edit) @829   15 years Jari Häkkinen Fixes #173.
(edit) @825   15 years Peter removed minmax functions and moved shuffle into vector.*
(edit) @813   15 years Peter Predict in NBC. Fixes #57
(edit) @811   15 years Peter dox
(edit) @810   15 years Jari Häkkinen Changed to obey the general wisdom: If you write the same code snipet …
(edit) @809   15 years Jari Häkkinen Fixed spelling.
(edit) @808   15 years Peter previous argument was invalid, but here is an implementation. Fixes #205
(edit) @805   15 years Peter removed Option and Commandline. Not mature enough for a release. …
(edit) @797   15 years Jari Häkkinen Fixes #191. This is the best that can be done with the current design.
(edit) @796   15 years Jari Häkkinen Fixes #201.
(edit) @794   15 years Peter making yat compile
(edit) @792   15 years Jari Häkkinen Addresses #193. matrix now works as outlined in the ticket discussion. …
(edit) @791   15 years Jari Häkkinen Addresses #193. Added missing implementations.
(edit) @790   15 years Jari Häkkinen Addresses #193. Fixing doxygen docs, and operator=.
(edit) @789   15 years Jari Häkkinen Addresses #193. vector now works as outlined here. Added some …
(edit) @788   15 years Jari Häkkinen Improved comparison operator and equal function doxygen doc. Added for …
(edit) @787   15 years Peter removed v_const in vector since it never used for anything but only …
(edit) @785   15 years Peter I think it is clearer if gsl_vector_const_view is declared as const …
(edit) @784   15 years Jari Häkkinen References #155. Removed potential null pointer usage. Some unwanted …
(edit) @783   15 years Jari Häkkinen Fixes #155. Added asserts to check vectors in all non-const functions …
(edit) @782   15 years Jari Häkkinen Fixes #195.
(edit) @780   15 years Jari Häkkinen Fixed exception message.
(edit) @776   15 years Jari Häkkinen Fixed typos.
(edit) @775   15 years Jari Häkkinen Fixes #200.
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