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@871
|
15 years |
Peter |
minor docs fix
|
|
|
@869
|
15 years |
Peter |
Adding Smith-Waterman local alignment and modified ssearch to use this …
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|
|
@868
|
15 years |
Peter |
fixes ticket:236
|
|
|
@867
|
15 years |
Peter |
adding function doing a SSEARCH between two strings
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|
|
@866
|
15 years |
Markus Ringnér |
refs #236. EnsembleBuilder::predict bug fixed for matrix-based …
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|
|
@865
|
15 years |
Peter |
changing URL to http://trac.thep.lu.se/trac/yat
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|
|
@863
|
15 years |
Markus Ringnér |
Fixed bug in FeatureSelectorIR that resulted in incorrect results!.
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|
|
@862
|
15 years |
Markus Ringnér |
Fixed bug in InputRanker? that sometimes gave rise to a bus error …
|
|
|
@861
|
15 years |
Peter |
adding class to store and compare std::type_info
|
|
|
@860
|
15 years |
Peter |
fixes #149 - Target constructor from Target and vector<string>
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|
|
@859
|
15 years |
Peter |
updated copyright
|
|
|
@858
|
15 years |
Peter |
refs #148 in EnsembleBuilder?
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|
|
@857
|
15 years |
Peter |
refs #148 in NCC
|
|
|
@856
|
15 years |
Markus Ringnér |
The SNR score is now ok again and renamed SNRScore. Fixes #235"
|
|
|
@852
|
16 years |
Jari Häkkinen |
Fixes #228.
|
|
|
@851
|
16 years |
Jari Häkkinen |
Fixes #229.
|
|
|
@848
|
16 years |
Jari Häkkinen |
Merged log:/branches/0.3.1#838:846 to trunk.
|
|
|
@842
|
16 years |
Peter |
fixed typo in error msg
|
|
|
@837
|
16 years |
Peter |
Fixed include to be correct also when being case-sensitive. refs #220 …
|
|
|
@833
|
16 years |
Jari Häkkinen |
Addresses #217. Fixed so that 'make distcheck' compiles but tests fail …
|
|
|
@832
|
16 years |
Peter |
Refs #217 cleaning up makefile.am
|
|
|
@831
|
16 years |
Peter |
Refs #185.
|
|
|
@830
|
16 years |
Jari Häkkinen |
Fixes #206.
|
|
|
@829
|
16 years |
Jari Häkkinen |
Fixes #173.
|
|
|
@828
|
16 years |
Peter |
Generalized ConsenusInputRanker?, Fixes #151
|
|
|
@827
|
16 years |
Peter |
added Functors to be used in CIR. Refs #151
|
|
|
@826
|
16 years |
Peter |
documentation and some minor fixes Fixes #135
|
|
|
@825
|
16 years |
Peter |
removed minmax functions and moved shuffle into vector.*
|
|
|
@823
|
16 years |
Peter |
BootstrapSampler?. Fixes #134
|
|
|
@822
|
16 years |
Peter |
redesigned tTest fixes #212 and #156
|
|
|
@821
|
16 years |
Peter |
Modified ROC class to use AUC class in calculation of ROC area. Refs #101
|
|
|
@820
|
16 years |
Peter |
Changed name again. ROCScore is now called AUC. Also fixed several …
|
|
|
@818
|
16 years |
Peter |
It depends on the use case here, but I think I agree so hist_ is no …
|
|
|
@817
|
16 years |
Peter |
Fixes #143
|
|
|
@815
|
16 years |
Peter |
added constructor for DataLookup1D from a utility::vector
|
|
|
@813
|
16 years |
Peter |
Predict in NBC. Fixes #57
|
|
|
@812
|
16 years |
Peter |
implemented NBC predict. Have to check what happens in the weighted …
|
|
|
@811
|
16 years |
Peter |
dox
|
|
|
@810
|
16 years |
Jari Häkkinen |
Changed to obey the general wisdom: If you write the same code snipet …
|
|
|
@809
|
16 years |
Jari Häkkinen |
Fixed spelling.
|
|
|
@808
|
16 years |
Peter |
previous argument was invalid, but here is an implementation. Fixes #205
|
|
|
@805
|
16 years |
Peter |
removed Option and Commandline. Not mature enough for a release. …
|
|
|
@803
|
16 years |
Peter |
removed Microarray namespce and its conents
|
|
|
@798
|
16 years |
Jari Häkkinen |
Removed unnecessary #include. Added tests for random number distributions.
|
|
|
@797
|
16 years |
Jari Häkkinen |
Fixes #191. This is the best that can be done with the current design.
|
|
|
@796
|
16 years |
Jari Häkkinen |
Fixes #201.
|
|
|
@794
|
16 years |
Peter |
making yat compile
|
|
|
@792
|
16 years |
Jari Häkkinen |
Addresses #193. matrix now works as outlined in the ticket
discussion. …
|
|
|
@791
|
16 years |
Jari Häkkinen |
Addresses #193. Added missing implementations.
|
|
|
@790
|
16 years |
Jari Häkkinen |
Addresses #193. Fixing doxygen docs, and operator=.
|
|
|
@789
|
16 years |
Jari Häkkinen |
Addresses #193. vector now works as outlined here. Added some …
|
|
|
@788
|
16 years |
Jari Häkkinen |
Improved comparison operator and equal function doxygen doc. Added for …
|
|
|
@787
|
16 years |
Peter |
removed v_const in vector since it never used for anything but only …
|
|
|
@785
|
16 years |
Peter |
I think it is clearer if gsl_vector_const_view is declared as const …
|
|
|
@784
|
16 years |
Jari Häkkinen |
References #155. Removed potential null pointer usage. Some unwanted …
|
|
|
@783
|
16 years |
Jari Häkkinen |
Fixes #155. Added asserts to check vectors in all non-const functions …
|
|
|
@782
|
16 years |
Jari Häkkinen |
Fixes #195.
|
|
|
@781
|
16 years |
Peter |
changing name to ROCScore and also added some cassert includes
|
|
|
@780
|
16 years |
Jari Häkkinen |
Fixed exception message.
|
|
|
@779
|
16 years |
Peter |
Refs #101
|
|
|
@778
|
16 years |
Peter |
added ROCscore class. refs #101
|
|
|
@777
|
16 years |
Peter |
Changed Fisher interface dramatically. No longer inherited from Score. …
|
|
|
@776
|
16 years |
Jari Häkkinen |
Fixed typos.
|
|
|
@775
|
16 years |
Jari Häkkinen |
Fixes #200.
|
|
|
@774
|
16 years |
Jari Häkkinen |
Fixes #194.
|
|
|
@773
|
16 years |
Jari Häkkinen |
Fixes #138. Removed add, sub, scale and added appropriate operators.
|
|
|
@772
|
16 years |
Peter |
fixes #126 and added some functions in AveragerPair? and …
|
|
|
@768
|
16 years |
Peter |
addresses #57
|
|
|
@767
|
16 years |
Peter |
Fixes #65
|
|
|
@766
|
16 years |
Peter |
added constructing view from utility::vector
|
|
|
@762
|
16 years |
Jari Häkkinen |
Fixes #76. Creating/recreating BLAS support matrix only when needed.
|
|
|
@761
|
16 years |
Jari Häkkinen |
Fixes #7.
|
|
|
@760
|
16 years |
Peter |
throw exception when detecting invalid 2x2 table. Fixes #26
|
|
|
@759
|
16 years |
Jari Häkkinen |
Fixes #171 and addresses #2. A few more GSL_error exceptions. Removed …
|
|
|
@758
|
16 years |
Jari Häkkinen |
Fixes #2. Finalized adding GSL_error exceptions.
|
|
|
@757
|
16 years |
Jari Häkkinen |
Fixed #include statemenst and forward declarations. asserts in headers …
|
|
|
@756
|
16 years |
Jari Häkkinen |
Added missing #include
|
|
|
@755
|
16 years |
Jari Häkkinen |
Addresses #2 and #65. Continued adding GSL_error exceptions, and added …
|
|
|
@754
|
16 years |
Jari Häkkinen |
Addresses #2 and #65. Continued adding GSL_error exceptions, and added …
|
|
|
@753
|
16 years |
Jari Häkkinen |
Addresses #2. Continued adding GSL_error exceptions.
|
|
|
@752
|
16 years |
Jari Häkkinen |
Moving a function implementation from .h to .cc.
|
|
|
@751
|
16 years |
Jari Häkkinen |
Addresses #2. Continued adding GSL_error exceptions.
|
|
|
@750
|
16 years |
Jari Häkkinen |
Addresses #2. Continued adding GSL_error exceptions.
|
|
|
@749
|
16 years |
Peter |
fixes #72
|
|
|
@748
|
16 years |
Peter |
documentation for SNR improved. fixes #123
|
|
|
@747
|
16 years |
Peter |
replaced includes in header files with forward declarations when …
|
|
|
@746
|
16 years |
Peter |
Fixes #146
|
|
|
@745
|
16 years |
Peter |
fixes #154
|
|
|
@743
|
16 years |
Peter |
Changed function to return reference to member variable string. This …
|
|
|
@742
|
16 years |
Peter |
added test that LinearWeighte? is equal to PolynomialWeighted?(1) fixes #166
|
|
|
@741
|
16 years |
Peter |
fixes #161 and #164
|
|
|
@740
|
16 years |
Peter |
added more test in MultiDimWeighted? and moved some stuff to be …
|
|
|
@739
|
16 years |
Peter |
fixes #178 and removes a bug in MultiDimensional?
|
|
|
@738
|
16 years |
Jari Häkkinen |
Fixes #8 and #179, addresses #2.
|
|
|
@737
|
16 years |
Peter |
moving vector matrix multiplication to matrix.h and matrix.cc
|
|
|
@736
|
16 years |
Peter |
Fixes #176
|
|
|
@735
|
16 years |
Peter |
forgot to check in matrix.h
|
|
|
@734
|
16 years |
Peter |
added vector*matrix and matrix*vector operators. fixes #18
|
|
|
@733
|
16 years |
Peter |
fixes #53
|
|
|
@732
|
16 years |
Peter |
fixes #42
|
|
|