source: trunk/yat

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Diff Rev Age Author Log Message
(edit) @985   14 years Peter minor bug
(edit) @984   14 years Peter implementing refs functions
(edit) @983   14 years Peter typo
(edit) @982   14 years Peter adding description variable for cmd
(edit) @981   14 years Peter adding convenient class for help option
(edit) @980   14 years Peter adding possibility to make option required
(edit) @979   14 years Peter fixing bug in OptionFile?. Dont try to create FileUtil? for option not …
(edit) @978   14 years Peter using std in our vector::shuffle
(edit) @975   14 years Peter adding Option class for argument associated with a file, and fixed …
(edit) @974   14 years Peter improve help output
(edit) @972   14 years Peter well to be correct
(edit) @971   14 years Markus Ringnér Fixed bug so things compile on OS X.
(edit) @968   14 years Peter adding mssing files
(edit) @966   14 years Peter fixing some doxygen warnings
(edit) @965   14 years Peter Adding CommandLine? class. finishes #240
(edit) @964   14 years Peter adding function to set maximal training epochs in SVM, and fixed so C …
(edit) @963   14 years Peter fixes #268. SVM throws if when train() fails
(edit) @961   14 years Peter correcting NBC train. refs ticket:271
(edit) @960   14 years Peter fixed ticket:271
(edit) @959   14 years Peter Fixed so NBC and SVM are throwing when unexpected DataLookup2D is …
(edit) @958   14 years Peter allowing mixture of weighted and unweighted iterators in vector_distance
(edit) @956   14 years Markus Ringnér Bug fixing
(edit) @950   14 years Peter SVM::make_classifier is now throwing if KernelLookup? is not passed.
(edit) @949   14 years Peter fixing bug in AveragerWeighted? so actually weights are used when …
(edit) @948   14 years Markus Ringnér Adding support and checks for intended lookups in classifiers
(edit) @938   14 years Peter improving constness correctness
(edit) @937   14 years Peter changing name of IteratorTraits? to iterator_traits
(edit) @936   14 years Peter reimplementing yat_assert as a throwing function
(edit) @935   14 years Peter fixing doxygen problem
(edit) @934   14 years Peter fixing bug when range is one value only
(edit) @933   14 years Peter mad function now takes iterators
(edit) @932   14 years Peter median and percentile functions now take iterators rather than vectors
(edit) @931   14 years Markus Ringnér Working on ticket:259. Removed old Distance see ticket:250
(edit) @930   14 years Markus Ringnér Fixed support for MatrixLookup? in NCC. See ticket:259
(edit) @929   14 years Peter grammar
(edit) @928   14 years Peter removing some includes not needed
(edit) @927   14 years Peter modifying weighted euclidean
(edit) @926   14 years Markus Ringnér Fixing minor mistakes so things gets installed with make install
(edit) @925   14 years Markus Ringnér NCC and IGP have been changed to templates on Distance
(edit) @921   14 years Jari Häkkinen Removed undefined macro on MacOSX. Now the yat_assert compiles.
(edit) @919   14 years Peter fixes #239
(edit) @917   14 years Peter fixes #257
(edit) @916   14 years Peter Sorry this commit is a bit to big. Adding a yat_assert. The yat …
(edit) @915   14 years Peter fixing dox
(edit) @914   14 years Peter refactoring add function in Averagers, refs #246
(edit) @913   14 years Peter remove stupid extra include that was added in last ci
(edit) @912   14 years Peter Made add function for AveragerPair? no longer accept weighted …
(edit) @911   14 years Peter Made add function for Averager no longer accept weighted iterators. …
(edit) @910   14 years Peter impl add function for AveragerWeighted?. The function distinguishes …
(edit) @909   14 years Peter using weighted_iterator_traits, closes #151
(edit) @908   14 years Peter adding IteratorWeighted?.h in Makefile.am (so file is included in …
(edit) @904   14 years Peter removing assert from header file
(edit) @902   14 years Markus Ringnér Fixing mistake in last revision (forgot to add KNN.h)
(edit) @901   14 years Markus Ringnér Added a template KNN classifier where the distance measure is the …
(edit) @900   14 years Markus Ringnér Refs #251. Fixed so the unweighted distances are at the …
(edit) @899   14 years Peter changed euclidean to fulfill design criteria, removes …
(edit) @898   14 years Markus Ringnér A first suggestion for how to adress #250. Also removed contamination …
(edit) @897   14 years Peter removing keyword that was mistakingly added before
(edit) @896   14 years Peter
(edit) @895   14 years Peter Another try, hm…
(edit) @894   14 years Peter setting missing property Id on files
(edit) @893   14 years Peter Removing make check' output. Please obey the rule that tests are mute …
(edit) @892   14 years Peter Fixed documentation of sum_squared_deviation
(edit) @891   14 years Markus Ringnér Minor modifications
(edit) @890   14 years Markus Ringnér Refs #245 #246 #247
(edit) @889   14 years Markus Ringnér Refs #245. A new structure to calculate distances between vectors that …
(edit) @888   14 years Peter fixing doxygen parsing
(edit) @887   14 years Peter made add function template so it accepts AveragerWeighted? too. Also …
(edit) @886   14 years Peter add function for Averager and AveragerPair? taking iterators refs #246
(edit) @884   14 years Peter some documentation
(edit) @883   14 years Peter fixing problems with iterator -> const_iterator conversion
(edit) @882   14 years Peter fixing includes - sorry about that
(edit) @881   14 years Peter merged constIterator into Iterator and added an extra template …
(edit) @880   14 years Peter refs #244
(edit) @879   14 years Markus Ringnér Added support to utility::vector for gsl-functions that finds indices …
(edit) @878   14 years Markus Ringnér Problem with previous checkin fixed
(edit) @877   14 years Markus Ringnér This revision breaks the vector_test. I know this is against the rules …
(edit) @876   14 years Jari Häkkinen Added missing #include <cassert>
(edit) @875   14 years Peter rewriting SW algo, making code clearer, and perhaps removing a few bugs...?
(edit) @874   14 years Markus Ringnér Fixes ticket:237
(edit) @873   14 years Peter fixing some docs
(edit) @872   14 years Peter Some docs for TypeInfo?
(edit) @871   14 years Peter minor docs fix
(edit) @869   14 years Peter Adding Smith-Waterman local alignment and modified ssearch to use this …
(edit) @868   14 years Peter fixes ticket:236
(edit) @867   14 years Peter adding function doing a SSEARCH between two strings
(edit) @866   14 years Markus Ringnér refs #236. EnsembleBuilder::predict bug fixed for matrix-based …
(edit) @865   14 years Peter changing URL to http://trac.thep.lu.se/trac/yat
(edit) @863   14 years Markus Ringnér Fixed bug in FeatureSelectorIR that resulted in incorrect results!.
(edit) @862   14 years Markus Ringnér Fixed bug in InputRanker? that sometimes gave rise to a bus error …
(edit) @861   14 years Peter adding class to store and compare std::type_info
(edit) @860   14 years Peter fixes #149 - Target constructor from Target and vector<string>
(edit) @859   14 years Peter updated copyright
(edit) @858   14 years Peter refs #148 in EnsembleBuilder?
(edit) @857   14 years Peter refs #148 in NCC
(edit) @856   14 years Markus Ringnér The SNR score is now ok again and renamed SNRScore. Fixes #235"
(edit) @852   14 years Jari Häkkinen Fixes #228.
(edit) @851   14 years Jari Häkkinen Fixes #229.
(edit) @848   14 years Jari Häkkinen Merged log:/branches/0.3.1#838:846 to trunk.
(edit) @842   15 years Peter fixed typo in error msg
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