

@465

16 years 
Peter 
implemented score for WilcoxonFoldChange?



@464

16 years 
Peter 
made median template



@463

16 years 
Peter 
fixed bug in KernelView? constructor and updated tests



@462

16 years 
Peter 
changed link to svnstat plot to my place



@461

16 years 
Peter 
?



@460

16 years 
Peter 
changed name of class



@459

16 years 
Peter 
only one class per line in Makefile.am



@458

16 years 
Markus Ringnér 
namespace svm changed to classifier



@457

16 years 
Markus Ringnér 



@456

16 years 
Markus Ringnér 
Updated to use DataViews?



@455

16 years 
Markus Ringnér 
Adding classes to support general views of matrices (and kernels). …



@454

16 years 
Markus Ringnér 
Added class for Nearest Centroid Classifier



@453

16 years 
Peter 
changed namespace svm to classifier in test



@452

16 years 
Peter 
it should compile now



@451

16 years 
Peter 
directory svm > classifier



@450

16 years 
Peter 
starting to move namespace svm, it wont work compiling for a while, …



@449

16 years 
Peter 
added approximative pvalue calculation using Chi2, fixed some bugs, …



@448

16 years 
Peter 
oops, at least compiling now



@447

16 years 
Peter 
added copy constructor for KernelView? and added construction of …



@446

16 years 
Peter 
added copy constructor for KernelView? and added construction of …



@445

16 years 
Peter 
added reset function and copy constructor to SVM



@444

16 years 
Markus Ringnér 
cosmetic change of printout



@443

16 years 
Jari Häkkinen 
Added missing virtual destructors.



@442

16 years 
Jari Häkkinen 
Added include of needed header files.



@441

16 years 
Jari Häkkinen 
Added include of cassert



@440

16 years 
Jari Häkkinen 
Added include of cassert



@439

16 years 
Markus Ringnér 
Fixed istream parsing when separator is last on line: a trailing NaN …



@438

16 years 
Markus Ringnér 
Fixed the test for checking for unexpected characters in vector …



@437

16 years 
Jari Häkkinen 
Minor style fixes.



@436

16 years 
Markus Ringnér 
Added support for NaN:s in read_to_int and read_to_double. Added …



@435

16 years 
Markus Ringnér 
Changed to using stringstreams when checking types for strings



@434

16 years 
Markus Ringnér 
Modified istream constructors to support both the old format and CSV …



@433

16 years 
Markus Ringnér 
Added member function to add all values in a gsl vector



@432

16 years 
Markus Ringnér 
Added operator<< for pairs



@431

16 years 
Markus Ringnér 
Added sort elements member function



@430

16 years 
Peter 
changed interface of Regression::Local



@429

16 years 
Peter 
separating weighted and nonweighted regression to different classes.



@428

16 years 
Peter 
improved doc in Score



@427

16 years 
Peter 
modified Averagers so their size in unsigned



@425

16 years 
Jari Häkkinen 
Fixed bug in DiscreteUniform?.
Added seeding support for classes …



@424

16 years 
Jari Häkkinen 
Fixed documentation and moved around code.



@423

16 years 
Jari Häkkinen 
Fixed gnuplot to generate png.



@422

16 years 
Peter 
Fixed statistics script. png generation must be fixed.



@421

16 years 
Jari Häkkinen 
Created nonsense matrix*vector operator.



@420

16 years 
Jari Häkkinen 
Merged better_matrix_class changes r402:419 into the trunk.



@414

16 years 
Peter 
adding FoldChange? class and fixing bugs in Score classes



@412

16 years 
Peter 
fixing bug with window in both ends



@411

16 years 
Jari Häkkinen 
Move todo items to trac.



@410

16 years 
Peter 
removed pvalue from Score baseclass interface



@401

17 years 
Peter 
fixing problem in test



@400

17 years 
Peter 
cleaning up AveragerWeighted?



@399

17 years 
Peter 
moved test averagers to one file
changed p flag to v flag



@398

17 years 
Peter 
added todo to AveragerWeighted?



@397

17 years 
Jari Häkkinen 
Fixed issues in AveragerWeighted?, added todo items.



@396

17 years 
Peter 
remove files from testing soft link



@395

17 years 
Peter 
testing even more stuff



@394

17 years 
Peter 
testing soft links



@393

17 years 
Peter 
extended test of matrix



@392

17 years 
Peter 
minor changes



@391

17 years 
Peter 
added todo



@390

17 years 
Peter 
added todo to matrix



@389

17 years 
Peter 
moved kernel to regression namespace and tried to fix some dox issues



@388

17 years 
Peter 
added test on Regression::Linear



@387

17 years 
Jari Häkkinen 
Initial documentation for resgression namespace.



@386

17 years 
Jari Häkkinen 
Extracted the underlying GSL multifit algo from Polynomial into …



@385

17 years 
Jari Häkkinen 
Continued fixing of regression stuff.



@384

17 years 
Peter 
removed Merge and OneDimensional?.cc



@383

17 years 
Jari Häkkinen 
Moved regression stuff into a namespace ...statistics::regression. …



@382

17 years 
Peter 
added todos on Kernel classes



@381

17 years 
Jari Häkkinen 
Fixed alphabetizing.



@380

17 years 
Peter 
corrected dox



@379

17 years 
Peter 
removed min parameter in uniform_int and added test to rnd_test



@378

17 years 
Jari Häkkinen 
Minor documentation change.



@377

17 years 
Jari Häkkinen 
Replaced utility::random_singleton.* with random::random.*



@376

17 years 
Jari Häkkinen 
Removed polluting inclusions of std namespace.



@375

17 years 
Jari Häkkinen 
Changed filenames lib/random/Random.* to lib/random/random.*



@374

17 years 
Jari Häkkinen 
Added documentation.
Added missing Makefile.am.
Implemented seeding of …



@373

17 years 
Peter 
modified (deleted) rnd_test to make it compile. Should be modified to …



@372

17 years 
Peter 
modified function normalize in histogram



@371

17 years 
Peter 
added random generator from histogram



@370

17 years 
Peter 
improved docs



@369

17 years 
Peter 
oops



@368

17 years 
Peter 
removed random in class names. No need since they have a random namespace



@367

17 years 
Peter 
added docs for random



@366

17 years 
Peter 
moved namespace random to its own directory



@365

17 years 
Peter 
created a random namespace and moved random stuff to this namespace



@364

17 years 
Peter 
added classes to random, now has all functionality that former …



@363

17 years 
Jari Häkkinen 
Added todo tag on normalize.



@362

17 years 
Jari Häkkinen 
First usable minimal version of new Random.



@361

17 years 
Jari Häkkinen 
Draft for new random number implementation.



@360

17 years 
Jari Häkkinen 
Added function to check file existence.



@359

17 years 
Peter 
moved inline implementations



@358

17 years 
Peter 
cleaned up in random_singleton



@357

17 years 
Peter 
updated doc and set precision to 12 for vector operator <<



@356

17 years 
Jari Häkkinen 
Filepath changed (max>lev).



@355

17 years 
Peter 
modified #define to match #ifndef (oops)



@354

17 years 
Peter 
fix dox



@353

17 years 
Peter 
removed function returning the whole matrix. It is not needed anymore …



@352

17 years 
Peter 
corrected dox



@351

17 years 
Peter 
testing that .5 is accepted in is_float


