

@494

17 years 
Peter 
added pdf link and creation of Statistics document



@493

17 years 
Peter 
fixed typo in tScore and added make_classifier in SVM



@492

17 years 
Peter 
updated Weighted Statistics document and reimplemented few stuff. …



@491

17 years 
Peter 
made SVM inherit from SupervisedClassifer?



@490

17 years 
Peter 
added tests for AveragerPairWeighted?, corrected docs, and added an …



@489

17 years 
Peter 
added functions to AveragerPairWeighted?. Not tested yet.



@488

17 years 
Peter 
made Score classes ignoring data points with weight zero



@487

17 years 
Peter 
mad covariance calculation coherent with variance and added tests for …



@486

17 years 
Peter 
aligned AveragerWeighted? with Averager and added tests for checking …



@485

17 years 
Markus Ringnér 
First draft of EnsembleBuilder?



@484

17 years 
Peter 
added tests to Averager and fixed bug



@483

17 years 
Peter 
Went through averager class. Changed function to be sum_xx and …



@482

17 years 
Peter 
modified interface to CrossSplitter?, added functions to DataLookup2D …



@481

17 years 
Markus Ringnér 
Initial versions that will not compile but are more documentation for …



@480

17 years 
Jari Häkkinen 
Changed the statistics link once more.
Added Markus to authors.
Added …



@479

17 years 
Jari Häkkinen 
Removed obsolete doxygen config entry.



@478

17 years 
Peter 
removed KernelView? again  somehow the file was resurrected when the …



@477

17 years 
Jari Häkkinen 



@476

17 years 
Markus Ringnér 
Added interface class for supervised classifiers. Fixed NCC to comply …



@475

17 years 
Peter 
I dont know what happened, but everything is changed…



@472

17 years 
Jari Häkkinen 
Added mr Markus.



@465

17 years 
Peter 
implemented score for WilcoxonFoldChange?



@464

17 years 
Peter 
made median template



@463

17 years 
Peter 
fixed bug in KernelView? constructor and updated tests



@462

17 years 
Peter 
changed link to svnstat plot to my place



@461

17 years 
Peter 
?



@460

17 years 
Peter 
changed name of class



@459

17 years 
Peter 
only one class per line in Makefile.am



@458

17 years 
Markus Ringnér 
namespace svm changed to classifier



@457

17 years 
Markus Ringnér 



@456

17 years 
Markus Ringnér 
Updated to use DataViews?



@455

17 years 
Markus Ringnér 
Adding classes to support general views of matrices (and kernels). …



@454

17 years 
Markus Ringnér 
Added class for Nearest Centroid Classifier



@453

17 years 
Peter 
changed namespace svm to classifier in test



@452

17 years 
Peter 
it should compile now



@451

17 years 
Peter 
directory svm > classifier



@450

17 years 
Peter 
starting to move namespace svm, it wont work compiling for a while, …



@449

17 years 
Peter 
added approximative pvalue calculation using Chi2, fixed some bugs, …



@448

17 years 
Peter 
oops, at least compiling now



@447

17 years 
Peter 
added copy constructor for KernelView? and added construction of …



@446

17 years 
Peter 
added copy constructor for KernelView? and added construction of …



@445

17 years 
Peter 
added reset function and copy constructor to SVM



@444

17 years 
Markus Ringnér 
cosmetic change of printout



@443

17 years 
Jari Häkkinen 
Added missing virtual destructors.



@442

17 years 
Jari Häkkinen 
Added include of needed header files.



@441

17 years 
Jari Häkkinen 
Added include of cassert



@440

17 years 
Jari Häkkinen 
Added include of cassert



@439

17 years 
Markus Ringnér 
Fixed istream parsing when separator is last on line: a trailing NaN …



@438

17 years 
Markus Ringnér 
Fixed the test for checking for unexpected characters in vector …



@437

17 years 
Jari Häkkinen 
Minor style fixes.



@436

17 years 
Markus Ringnér 
Added support for NaN:s in read_to_int and read_to_double. Added …



@435

17 years 
Markus Ringnér 
Changed to using stringstreams when checking types for strings



@434

17 years 
Markus Ringnér 
Modified istream constructors to support both the old format and CSV …



@433

17 years 
Markus Ringnér 
Added member function to add all values in a gsl vector



@432

17 years 
Markus Ringnér 
Added operator<< for pairs



@431

17 years 
Markus Ringnér 
Added sort elements member function



@430

17 years 
Peter 
changed interface of Regression::Local



@429

17 years 
Peter 
separating weighted and nonweighted regression to different classes.



@428

17 years 
Peter 
improved doc in Score



@427

17 years 
Peter 
modified Averagers so their size in unsigned



@425

17 years 
Jari Häkkinen 
Fixed bug in DiscreteUniform?.
Added seeding support for classes …



@424

17 years 
Jari Häkkinen 
Fixed documentation and moved around code.



@423

18 years 
Jari Häkkinen 
Fixed gnuplot to generate png.



@422

18 years 
Peter 
Fixed statistics script. png generation must be fixed.



@421

18 years 
Jari Häkkinen 
Created nonsense matrix*vector operator.



@420

18 years 
Jari Häkkinen 
Merged better_matrix_class changes r402:419 into the trunk.



@414

18 years 
Peter 
adding FoldChange? class and fixing bugs in Score classes



@412

18 years 
Peter 
fixing bug with window in both ends



@411

18 years 
Jari Häkkinen 
Move todo items to trac.



@410

18 years 
Peter 
removed pvalue from Score baseclass interface



@401

18 years 
Peter 
fixing problem in test



@400

18 years 
Peter 
cleaning up AveragerWeighted?



@399

18 years 
Peter 
moved test averagers to one file
changed p flag to v flag



@398

18 years 
Peter 
added todo to AveragerWeighted?



@397

18 years 
Jari Häkkinen 
Fixed issues in AveragerWeighted?, added todo items.



@396

18 years 
Peter 
remove files from testing soft link



@395

18 years 
Peter 
testing even more stuff



@394

18 years 
Peter 
testing soft links



@393

18 years 
Peter 
extended test of matrix



@392

18 years 
Peter 
minor changes



@391

18 years 
Peter 
added todo



@390

18 years 
Peter 
added todo to matrix



@389

18 years 
Peter 
moved kernel to regression namespace and tried to fix some dox issues



@388

18 years 
Peter 
added test on Regression::Linear



@387

18 years 
Jari Häkkinen 
Initial documentation for resgression namespace.



@386

18 years 
Jari Häkkinen 
Extracted the underlying GSL multifit algo from Polynomial into …



@385

18 years 
Jari Häkkinen 
Continued fixing of regression stuff.



@384

18 years 
Peter 
removed Merge and OneDimensional?.cc



@383

18 years 
Jari Häkkinen 
Moved regression stuff into a namespace ...statistics::regression. …



@382

18 years 
Peter 
added todos on Kernel classes



@381

18 years 
Jari Häkkinen 
Fixed alphabetizing.



@380

18 years 
Peter 
corrected dox



@379

18 years 
Peter 
removed min parameter in uniform_int and added test to rnd_test



@378

18 years 
Jari Häkkinen 
Minor documentation change.



@377

18 years 
Jari Häkkinen 
Replaced utility::random_singleton.* with random::random.*



@376

18 years 
Jari Häkkinen 
Removed polluting inclusions of std namespace.



@375

18 years 
Jari Häkkinen 
Changed filenames lib/random/Random.* to lib/random/random.*



@374

18 years 
Jari Häkkinen 
Added documentation.
Added missing Makefile.am.
Implemented seeding of …



@373

18 years 
Peter 
modified (deleted) rnd_test to make it compile. Should be modified to …



@372

18 years 
Peter 
modified function normalize in histogram


