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Diff Rev Age Author Log Message
(edit) @610   15 years Peter ref #60 Sampler and inherited CrossValidationSampler?.
(edit) @609   15 years Markus Ringnér Fixes #98
(edit) @608   15 years Peter set properties
(edit) @607   15 years Peter ref #96 included FeatureSelection? in CrossSplitter?. Also happened to …
(edit) @606   15 years Peter ref #96 added missing functionality in FeatureSelector?
(edit) @605   15 years Peter simple test for FeatureSelector?
(edit) @604   15 years Peter ref #96 Changed InputRanker? to return vector of index rather than …
(edit) @603   15 years Peter set properties
(edit) @602   15 years Peter closes #99 documentation on CommandLine? class
(edit) @601   15 years Peter set properties on CommandLine? and Option files
(edit) @600   15 years Peter removed stupid trailing character
(edit) @599   15 years Peter updated corresponding test... well it's not a test it's more of an example.
(edit) @598   15 years Peter Changed interface of CommandLine? so short option is set with char. …
(edit) @597   15 years Markus Ringnér Fixed comments so they pass without some of the complaits from …
(edit) @596   15 years Peter some doc
(edit) @595   15 years Peter added MatrixLookupWeighted? class containing both data and weights
(edit) @594   15 years Peter closes #91 class parsing commandline
(edit) @593   15 years Markus Ringnér Fixed std includes to compile with g++ 4.1.
(edit) @592   15 years Peter added random_shuffle function in Target class
(edit) @591   15 years Peter added random_shuffle function in Target class
(edit) @590   15 years Peter closes #74 documentation
(edit) @589   15 years Peter closes #79 and cleaned up code
(edit) @588   15 years Markus Ringnér Added statistics functions to calculate the higher moments: skewness …
(edit) @587   15 years Jari Häkkinen Moved todo stuff to trac.
(edit) @586   15 years Peter closes #23 redesign of regression classes
(edit) @585   16 years Markus Ringnér Removed forgotten debug printout
(edit) @584   16 years Markus Ringnér Fixed so NCC and IGP works when there are NaNs? in centroids.
(edit) @583   16 years Markus Ringnér Forgot this one in last check in
(edit) @582   16 years Markus Ringnér Modified addding arrays to Averagers so templates are used to allow …
(edit) @581   16 years Markus Ringnér Added class for in-group-proportions score. Removed gslapi::vector …
(edit) @580   16 years Jari Häkkinen Removed LOCAL_INCLUDES.
(edit) @579   16 years Jari Häkkinen Removed obsolete lines.
(edit) @578   16 years Jari Häkkinen Removed stray file.
(edit) @577   16 years Jari Häkkinen More lib changed to c++_tools stuff.
(edit) @576   16 years Jari Häkkinen lib changed to c++_tools
(edit) @575   16 years Jari Häkkinen Renaming lib to c++_tools.
(edit) @574   16 years Jari Häkkinen Removing symbolic link.
(edit) @573   16 years Jari Häkkinen Made documentation generation optional, issue 'make doc' for docs …
(edit) @572   16 years Jari Häkkinen Removed optional creation of doc. Changed package name.
(edit) @571   16 years Peter added function to set C-Parameter in SVM
(edit) @570   16 years Jari Häkkinen Added copyright statement to files.
(edit) @569   16 years Peter modified prediction from SVM
(edit) @568   16 years Peter minor change in SVM
(edit) @567   16 years Markus Ringnér Fixed error message when ,atrix contains elements not covertible to …
(edit) @566   16 years Peter fixed bug in selected function in Kernels
(edit) @565   16 years Peter removed default row/column in constructors (MatrixLookup? and DataLookup1D)
(edit) @564   16 years Peter weight MatrixLookup? from a KernelLookup?
(edit) @563   16 years Jari Häkkinen Added copyright statement.
(edit) @562   16 years Jari Häkkinen Corrected copyright statement.
(edit) @561   16 years Jari Häkkinen Fixed documentation, added copyright statement.
(edit) @560   16 years Markus Ringnér Minor fixes plus fixed bug in ConsensusInputRanker?
(edit) @559   16 years Peter some changes in EB
(edit) @558   16 years Peter ConsensusInputRanker? now supports weights
(edit) @557   16 years Peter fixed bug in Averager::variance
(edit) @556   16 years Peter correcting assignment operators
(edit) @555   16 years Peter inserted private operator=
(edit) @554   16 years Markus Ringnér added small test
(edit) @553   16 years Peter added range check in KernelLookup? Constructor and clarified doc in …
(edit) @552   16 years Peter killed bug in SVM
(edit) @551   16 years Markus Ringnér Added tests of two nested CrossSplitters? to crossvalidation_test
(edit) @550   16 years Peter removed assert from matrix.h
(edit) @549   16 years Peter forgot to add file
(edit) @548   16 years Peter fixed bug in Kernels
(edit) @547   16 years Peter deleting dynamically allocated kernels in SVM destructor
(edit) @546   16 years Peter inlined function
(edit) @545   16 years Peter added feature selection for SVM
(edit) @544   16 years Peter corrected SVM::make_classifier
(edit) @543   16 years Peter moved destruction of ranker to SupervisedClassifier?
(edit) @542   16 years Peter added predict function in SVM supporting weight
(edit) @541   16 years Peter weights supported in CrossSplitter?
(edit) @540   16 years Peter added weights in CrossSplitter? - not supported in interface though.
(edit) @539   16 years Peter re-introduced prediction in SVM
(edit) @538   16 years Peter corrected test for KernelLookup?
(edit) @537   16 years Peter forked tests and fixed bugs
(edit) @536   16 years Peter fixed problem with ConsensusInputranker? - Now all tests do pass
(edit) @535   16 years Peter changed minor stupid stuff in gslapi
(edit) @534   16 years Peter bug fixes in MatrixLookup? and extended test
(edit) @533   16 years Peter test for MatrixLookup?. NOTE: consensus_inputranker_test still fails
(edit) @532   16 years Peter modified implementation of Parson weighted - now in line with other …
(edit) @531   16 years Markus Ringnér Note there are some problem when creating MatrixLookups? from …
(edit) @530   16 years Markus Ringnér Fixed problems for empty target groups
(edit) @529   16 years Markus Ringnér Added score for signal-to-noise ratio (Golub score). Fixed …
(edit) @528   16 years Peter adding source files that were forgotten
(edit) @527   16 years Peter Modified Kernel to be built from MatrixLookup? rather than …
(edit) @526   16 years Markus Ringnér Fixed bug in tScore and in MatrixLookup?. Added support for scoring …
(edit) @525   16 years Markus Ringnér Added structure to Supervised classifier and NCC to support ranking …
(edit) @524   16 years Peter fixed bug PolynimialKernelFunction? - can now handle NaNs? with weights
(edit) @523   16 years Peter add prediction functions to SVM
(edit) @522   16 years Peter added function to add InputRanker? to ConsensusInputRanker?
(edit) @521   16 years Peter extended target and ensemble tests
(edit) @520   16 years Peter changed internal representation in Target
(edit) @519   16 years Peter percentile is now called percentile
(edit) @518   16 years Peter also adding the test for EnsembleBuilder?
(edit) @517   16 years Peter fixed bug in DataLookup2D and created test for EnsembleBuilder?
(edit) @516   16 years Peter added function generating weight matrix with respect to not-a-number …
(edit) @515   16 years Peter fixed indentation for doxygen
(edit) @514   16 years Peter generalised binary functionality in Target
(edit) @513   16 years Peter added kernels using weights
(edit) @512   16 years Peter moved common member variables to base class Kernel
(edit) @511   16 years Peter added percentile function for gslapi::vector
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