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Diff Rev Age Author Log Message
(edit) @624   17 years Peter fixes #109 and #110
(edit) @623   17 years Peter fixes #112 and refs #123 added overloaded function score taking Target …
(edit) @622   17 years Peter fixes #111
(edit) @621   17 years Peter fixes #108 SubsetGenerator? with featureselection is now supported for …
(edit) @620   17 years Markus Ringnér Fixed problems with Averager that sometimes appeared as failures in …
(edit) @619   17 years Peter fixes #107 and refs #105 fixed bug in EnsembleBuilder? and removed some …
(edit) @617   17 years Jari Häkkinen Cleaned up stray gslapi stuff.
(edit) @616   17 years Jari Häkkinen Removed gslapi namespace and put the code into utility namespace. Move …
(edit) @615   17 years Peter ref #60 NOTE: there is most likely a bug around. I have removed the …
(edit) @614   17 years Jari Häkkinen Minor fixes in doxygen documentation.
(edit) @613   17 years Markus Ringnér Sampler and SubsetGenerator? in progress. Fixes #103
(edit) @612   17 years Peter
(edit) @611   17 years Markus Ringnér Fixes #100
(edit) @610   17 years Peter ref #60 Sampler and inherited CrossValidationSampler?.
(edit) @609   17 years Markus Ringnér Fixes #98
(edit) @608   17 years Peter set properties
(edit) @607   17 years Peter ref #96 included FeatureSelection? in CrossSplitter?. Also happened to …
(edit) @606   17 years Peter ref #96 added missing functionality in FeatureSelector?
(edit) @605   17 years Peter simple test for FeatureSelector?
(edit) @604   17 years Peter ref #96 Changed InputRanker? to return vector of index rather than …
(edit) @603   17 years Peter set properties
(edit) @602   17 years Peter closes #99 documentation on CommandLine? class
(edit) @601   17 years Peter set properties on CommandLine? and Option files
(edit) @600   17 years Peter removed stupid trailing character
(edit) @599   17 years Peter updated corresponding test... well it's not a test it's more of an example.
(edit) @598   17 years Peter Changed interface of CommandLine? so short option is set with char. …
(edit) @597   17 years Markus Ringnér Fixed comments so they pass without some of the complaits from …
(edit) @596   17 years Peter some doc
(edit) @595   17 years Peter added MatrixLookupWeighted? class containing both data and weights
(edit) @594   17 years Peter closes #91 class parsing commandline
(edit) @593   17 years Markus Ringnér Fixed std includes to compile with g++ 4.1.
(edit) @592   17 years Peter added random_shuffle function in Target class
(edit) @591   17 years Peter added random_shuffle function in Target class
(edit) @590   17 years Peter closes #74 documentation
(edit) @589   17 years Peter closes #79 and cleaned up code
(edit) @588   17 years Markus Ringnér Added statistics functions to calculate the higher moments: skewness …
(edit) @587   17 years Jari Häkkinen Moved todo stuff to trac.
(edit) @586   17 years Peter closes #23 redesign of regression classes
(edit) @585   17 years Markus Ringnér Removed forgotten debug printout
(edit) @584   17 years Markus Ringnér Fixed so NCC and IGP works when there are NaNs? in centroids.
(edit) @583   17 years Markus Ringnér Forgot this one in last check in
(edit) @582   17 years Markus Ringnér Modified addding arrays to Averagers so templates are used to allow …
(edit) @581   17 years Markus Ringnér Added class for in-group-proportions score. Removed gslapi::vector …
(edit) @580   17 years Jari Häkkinen Removed LOCAL_INCLUDES.
(edit) @579   17 years Jari Häkkinen Removed obsolete lines.
(edit) @578   17 years Jari Häkkinen Removed stray file.
(edit) @577   17 years Jari Häkkinen More lib changed to c++_tools stuff.
(edit) @576   17 years Jari Häkkinen lib changed to c++_tools
(edit) @575   17 years Jari Häkkinen Renaming lib to c++_tools.
(edit) @574   17 years Jari Häkkinen Removing symbolic link.
(edit) @573   17 years Jari Häkkinen Made documentation generation optional, issue 'make doc' for docs …
(edit) @572   17 years Jari Häkkinen Removed optional creation of doc. Changed package name.
(edit) @571   17 years Peter added function to set C-Parameter in SVM
(edit) @570   17 years Jari Häkkinen Added copyright statement to files.
(edit) @569   17 years Peter modified prediction from SVM
(edit) @568   17 years Peter minor change in SVM
(edit) @567   17 years Markus Ringnér Fixed error message when ,atrix contains elements not covertible to …
(edit) @566   17 years Peter fixed bug in selected function in Kernels
(edit) @565   17 years Peter removed default row/column in constructors (MatrixLookup? and DataLookup1D)
(edit) @564   17 years Peter weight MatrixLookup? from a KernelLookup?
(edit) @563   17 years Jari Häkkinen Added copyright statement.
(edit) @562   17 years Jari Häkkinen Corrected copyright statement.
(edit) @561   17 years Jari Häkkinen Fixed documentation, added copyright statement.
(edit) @560   17 years Markus Ringnér Minor fixes plus fixed bug in ConsensusInputRanker?
(edit) @559   17 years Peter some changes in EB
(edit) @558   17 years Peter ConsensusInputRanker? now supports weights
(edit) @557   17 years Peter fixed bug in Averager::variance
(edit) @556   17 years Peter correcting assignment operators
(edit) @555   17 years Peter inserted private operator=
(edit) @554   17 years Markus Ringnér added small test
(edit) @553   17 years Peter added range check in KernelLookup? Constructor and clarified doc in …
(edit) @552   17 years Peter killed bug in SVM
(edit) @551   17 years Markus Ringnér Added tests of two nested CrossSplitters? to crossvalidation_test
(edit) @550   17 years Peter removed assert from matrix.h
(edit) @549   17 years Peter forgot to add file
(edit) @548   17 years Peter fixed bug in Kernels
(edit) @547   17 years Peter deleting dynamically allocated kernels in SVM destructor
(edit) @546   17 years Peter inlined function
(edit) @545   17 years Peter added feature selection for SVM
(edit) @544   17 years Peter corrected SVM::make_classifier
(edit) @543   17 years Peter moved destruction of ranker to SupervisedClassifier?
(edit) @542   17 years Peter added predict function in SVM supporting weight
(edit) @541   17 years Peter weights supported in CrossSplitter?
(edit) @540   17 years Peter added weights in CrossSplitter? - not supported in interface though.
(edit) @539   17 years Peter re-introduced prediction in SVM
(edit) @538   17 years Peter corrected test for KernelLookup?
(edit) @537   17 years Peter forked tests and fixed bugs
(edit) @536   17 years Peter fixed problem with ConsensusInputranker? - Now all tests do pass
(edit) @535   17 years Peter changed minor stupid stuff in gslapi
(edit) @534   17 years Peter bug fixes in MatrixLookup? and extended test
(edit) @533   17 years Peter test for MatrixLookup?. NOTE: consensus_inputranker_test still fails
(edit) @532   17 years Peter modified implementation of Parson weighted - now in line with other …
(edit) @531   17 years Markus Ringnér Note there are some problem when creating MatrixLookups? from …
(edit) @530   17 years Markus Ringnér Fixed problems for empty target groups
(edit) @529   17 years Markus Ringnér Added score for signal-to-noise ratio (Golub score). Fixed …
(edit) @528   17 years Peter adding source files that were forgotten
(edit) @527   17 years Peter Modified Kernel to be built from MatrixLookup? rather than …
(edit) @526   17 years Markus Ringnér Fixed bug in tScore and in MatrixLookup?. Added support for scoring …
(edit) @525   17 years Markus Ringnér Added structure to Supervised classifier and NCC to support ranking …
(edit) @524   17 years Peter fixed bug PolynimialKernelFunction? - can now handle NaNs? with weights
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