

@681

16 years 
Jari Häkkinen 
Moved namespace regression up one level (leaving namespace statistics).



@680

16 years 
Jari Häkkinen 
Addresses #153. Introduced yat namespace. Removed alignment namespace. …



@679

16 years 
Markus Ringnér 
Fixed some minor stuff so it compiles on eddie.thep.lu.se running g++3.2



@678

16 years 
Jari Häkkinen 
Added yat logo.



@677

16 years 
Jari Häkkinen 
Removed stray ! characters.



@676

16 years 
Jari Häkkinen 
Fixed #83. This message applies to this revision and
revision:675. …



@675

16 years 
Jari Häkkinen 
References #83. Changing project name to yat. Compilation will fail in …



@674

16 years 
Peter 
fixes #152



@673

16 years 
Peter 
fixed dox in SNR



@672

16 years 
Peter 
added MAD function in statistics



@671

16 years 
Peter 
fixed some percentile dox refs #69



@670

16 years 
Peter 
added cv function in Averager



@669

16 years 
Peter 
#closes #88. SAM score class added



@668

16 years 
Peter 
removing debug code



@667

16 years 
Peter 
refs #151 using Functor now in consensusinputranker to retrieve …



@666

16 years 
Peter 
refs #151, added IRRetreive functors and prepared ConsensusInputRanker? …



@665

16 years 
Peter 
Fixes #142. Added access to score the InputRanking? is based upon. …



@664

16 years 
Peter 
modified TODO to be in line with the Trac pages



@663

16 years 
Peter 
added assignment operator in Target



@662

17 years 
Peter 
refs #57 added class for Naive Baysian Classification. Predict …



@661

17 years 
Peter 
refs #68 added link to Weighted statistics document and svndigest …



@660

17 years 
Peter 
closes #140 moved Index class to its own file and changed name to SVindex



@659

17 years 
Peter 
fixes #147 and #136



@658

17 years 
Peter 
added function in KernelLookup? to create a KernelLookup? from inner …



@657

17 years 
Peter 
finishing cleaning



@656

17 years 
Peter 
fixes #145 cleaning up interface of DataLook2D. Those function were …



@655

17 years 
Peter 
improved documentation on EnsembleBulder::predict



@654

17 years 
Peter 
replaced some doublespaces with tabs making Doxygen parsing the …



@653

17 years 
Peter 
updated copyright statement



@652

17 years 
Peter 
added tag in config file so namespaces are included in sorting class …



@651

17 years 
Peter 
corrected dox in Kernel classes



@650

17 years 
Peter 
corrected documentation to be in line with guidinglines



@649

17 years 
Jari Häkkinen 
Fixed typo in doxygen comment.



@648

17 years 
Peter 
fixes #133 removed all errors reported from Doxygen. Only one error …



@647

17 years 
Peter 
fixes #137 added flag for doxygen to write includes in preferable way.



@646

17 years 
Peter 
removing pointer_comare because it is not a pointer_compare but rather …



@645

17 years 
Markus Ringnér 
Minor things



@644

17 years 
Jari Häkkinen 
Set svndigest:ignore property on test data.



@643

17 years 
Jari Häkkinen 
These are now superseeded by svndigest project, …



@642

17 years 
Peter 
adding class for selecting features by random



@641

17 years 
Peter 
added tag for Doxygen preprocessor to exclude internal Index class in SVM



@640

17 years 
Peter 
fixes #132 and #95, and refs #135 replaced bool owner in DataLookup2D …



@639

17 years 
Markus Ringnér 
Fixed documentation bugs



@638

17 years 
Markus Ringnér 
Fixes #131



@637

17 years 
Peter 
fixes #122



@636

17 years 
Peter 
closes #120 removed weights from SubsetGenerator?



@635

17 years 
Peter 
closes #106 make_classifier is again taking DataLookup2D and Target …



@634

17 years 
Markus Ringnér 
Fixed NCC predict to work with MatrixLookupWeighted?



@633

17 years 
Markus Ringnér 
Minor fix



@632

17 years 
Markus Ringnér 
Changes in NCC to support weight using MatrixLookupWeighted?. Still …



@631

17 years 
Peter 
fixes #102 added weighted() to DataLookup2D.



@630

17 years 
Peter 
fixes #117



@629

17 years 
Peter 
fixes #125 removing obsolete function and cleaning in Kernel classes.



@628

17 years 
Peter 
fixes #116 and #90 removed classes KernelWeighted_SEV and …



@627

17 years 
Peter 
fixes #124 also extended interface of AveragerPairWeighted? supporting …



@626

17 years 
Peter 
fixes #113 and #114 removed Featureselection from NCC and …



@625

17 years 
Peter 
fixes #115 and ref #113 removed feature selection from SVM



@624

17 years 
Peter 
fixes #109 and #110



@623

17 years 
Peter 
fixes #112 and refs #123 added overloaded function score taking Target …



@622

17 years 
Peter 
fixes #111



@621

17 years 
Peter 
fixes #108 SubsetGenerator? with featureselection is now supported for …



@620

17 years 
Markus Ringnér 
Fixed problems with Averager that sometimes appeared as failures in …



@619

17 years 
Peter 
fixes #107 and refs #105 fixed bug in EnsembleBuilder? and removed some …



@617

17 years 
Jari Häkkinen 
Cleaned up stray gslapi stuff.



@616

17 years 
Jari Häkkinen 
Removed gslapi namespace and put the code into utility namespace.
Move …



@615

17 years 
Peter 
ref #60 NOTE: there is most likely a bug around. I have removed the …



@614

17 years 
Jari Häkkinen 
Minor fixes in doxygen documentation.



@613

17 years 
Markus Ringnér 
Sampler and SubsetGenerator? in progress. Fixes #103



@612

17 years 
Peter 



@611

17 years 
Markus Ringnér 
Fixes #100



@610

17 years 
Peter 
ref #60 Sampler and inherited CrossValidationSampler?.



@609

17 years 
Markus Ringnér 
Fixes #98



@608

17 years 
Peter 
set properties



@607

17 years 
Peter 
ref #96 included FeatureSelection? in CrossSplitter?. Also happened to …



@606

17 years 
Peter 
ref #96 added missing functionality in FeatureSelector?



@605

17 years 
Peter 
simple test for FeatureSelector?



@604

17 years 
Peter 
ref #96 Changed InputRanker? to return vector of index rather than …



@603

17 years 
Peter 
set properties



@602

17 years 
Peter 
closes #99 documentation on CommandLine? class



@601

17 years 
Peter 
set properties on CommandLine? and Option files



@600

17 years 
Peter 
removed stupid trailing character



@599

17 years 
Peter 
updated corresponding test... well it's not a test it's more of an example.



@598

17 years 
Peter 
Changed interface of CommandLine? so short option is set with char. …



@597

17 years 
Markus Ringnér 
Fixed comments so they pass without some of the complaits from …



@596

17 years 
Peter 
some doc



@595

17 years 
Peter 
added MatrixLookupWeighted? class containing both data and weights



@594

17 years 
Peter 
closes #91 class parsing commandline



@593

17 years 
Markus Ringnér 
Fixed std includes to compile with g++ 4.1.



@592

17 years 
Peter 
added random_shuffle function in Target class



@591

17 years 
Peter 
added random_shuffle function in Target class



@590

17 years 
Peter 
closes #74 documentation



@589

17 years 
Peter 
closes #79 and cleaned up code



@588

17 years 
Markus Ringnér 
Added statistics functions to calculate the higher moments: skewness …



@587

17 years 
Jari Häkkinen 
Moved todo stuff to trac.



@586

17 years 
Peter 
closes #23 redesign of regression classes



@585

17 years 
Markus Ringnér 
Removed forgotten debug printout



@584

17 years 
Markus Ringnér 
Fixed so NCC and IGP works when there are NaNs? in centroids.



@583

17 years 
Markus Ringnér 
Forgot this one in last check in



@582

17 years 
Markus Ringnér 
Modified addding arrays to Averagers so templates are used to allow …



@581

17 years 
Markus Ringnér 
Added class for ingroupproportions score. Removed gslapi::vector …


