#193 |
Serious flaw: matrix mutation functionality and view does not work properly
|
Jari Häkkinen
|
defect
|
blocker
|
utility
|
trunk
|
#203 |
tests don't compile
|
Jari Häkkinen
|
defect
|
blocker
|
test
|
trunk
|
#11 |
random class does not accept seed!!!
|
Jari Häkkinen
|
defect
|
critical
|
random
|
trunk
|
#94 |
Target.random_shuffle()
|
Peter
|
enhancement
|
critical
|
classifier
|
|
#201 |
const matrix& matrix::operator*=(const matrix& other)
|
Jari Häkkinen
|
defect
|
critical
|
utility
|
trunk
|
#205 |
resize matrix
|
Peter
|
enhancement
|
critical
|
utility
|
trunk
|
#21 |
General view for vector and matrix
|
Jari Häkkinen
|
enhancement
|
major
|
gslapi
|
trunk
|
#24 |
Averager classes should have constructors taking gslapi::vectors
|
Peter
|
enhancement
|
major
|
statistics
|
trunk
|
#43 |
AveragerPair return 'nan' for some member functions when no data has been added to it.
|
Peter
|
request
|
major
|
classifier
|
trunk
|
#52 |
Nan*0 treatment in GaussianKernelFunction
|
Peter
|
defect
|
major
|
classifier
|
|
#54 |
CrossSplitter of type Matrix from CrossSplitter of type Kernel
|
Peter
|
enhancement
|
major
|
classifier
|
|
#57 |
implement Naive Baysian Classifier
|
Peter
|
request
|
major
|
classifier
|
|
#59 |
NCC should accept external quality weights
|
Markus Ringnér
|
enhancement
|
major
|
classifier
|
trunk
|
#61 |
add operator[] DataLookup1D
|
Peter
|
enhancement
|
major
|
classifier
|
trunk
|
#63 |
remove constructor gslapi::vector(DataLookup1D&)
|
Jari Häkkinen
|
defect
|
major
|
gslapi
|
|
#66 |
Add GaussianKernelFunction_test
|
Peter
|
request
|
major
|
test
|
trunk
|
#86 |
SVM should use a MatrixLookup (and not KernelLookup) when feature selection is used.
|
Peter
|
enhancement
|
major
|
classifier
|
|
#95 |
ownership in Lookups is not optimal
|
Peter
|
enhancement
|
major
|
classifier
|
|
#105 |
remove asserts in header files
|
Peter
|
defect
|
major
|
classifier
|
trunk
|
#133 |
documentation bugs
|
Peter
|
defect
|
major
|
documentation
|
|
#135 |
Update documentation on DataLookup2D and daughter classes
|
Peter
|
enhancement
|
major
|
documentation
|
trunk
|
#136 |
Reference counter in Kernel
|
Peter
|
enhancement
|
major
|
classifier
|
trunk
|
#151 |
ConsensusInputRanker more flexible
|
Peter
|
request
|
major
|
classifier
|
|
#155 |
Current vector implementation can cause "unexpected" runtime aborts if bad programs are created.
|
Jari Häkkinen
|
enhancement
|
major
|
utility
|
trunk
|
#156 |
Two-sided vs One-sided P-values in ROC
|
Peter
|
defect
|
major
|
statistics
|
trunk
|
#170 |
Move inline directive in all headers and move constructor/destructor definitions in headers to .cc.
|
Jari Häkkinen
|
enhancement
|
major
|
classifier
|
trunk
|
#173 |
Optimize return values from member functions of PCA and related classes
|
Jari Häkkinen
|
defect
|
major
|
utility
|
trunk
|
#179 |
DiscreteUniform(const u_long n);
|
Jari Häkkinen
|
defect
|
major
|
random
|
trunk
|
#185 |
make copyright statement uniform
|
Peter
|
enhancement
|
major
|
documentation
|
trunk
|
#186 |
DiscreteUniform::operator(u_long) problem checking bounds.
|
Jari Häkkinen
|
defect
|
major
|
random
|
trunk
|
#196 |
Propagate version number to doxygen.config using the make system.
|
Jari Häkkinen
|
defect
|
major
|
documentation
|
trunk
|
#197 |
connect Project number in doxygen.config with version number in configure.ac
|
Markus Ringnér
|
request
|
major
|
classifier
|
|
#198 |
add test for Distance classes
|
Peter
|
request
|
major
|
statistics
|
trunk
|
#200 |
utility::vector add function could be operator+=
|
Jari Häkkinen
|
request
|
major
|
utility
|
trunk
|
#204 |
Potentially dangerous usage of references to external objects in !ContinuousGeneral
|
Peter
|
defect
|
major
|
random
|
trunk
|
#206 |
is matrix:set(const matrix&) needed?
|
Jari Häkkinen
|
enhancement
|
major
|
utility
|
|
#212 |
change interface of tTest
|
Peter
|
request
|
major
|
classifier
|
trunk
|
#16 |
save and load SVM
|
Peter
|
enhancement
|
minor
|
classifier
|
trunk
|
#19 |
Averager.n() return unsigned
|
Peter
|
enhancement
|
minor
|
statistics
|
trunk
|
#33 |
reimplement ROC::score_weighted
|
Peter
|
enhancement
|
minor
|
statistics
|
|
#44 |
templates for median and percentile should not sort but rather require sorted objects.
|
Peter
|
defect
|
minor
|
statistics
|
trunk
|
#45 |
test median functions
|
Peter
|
request
|
minor
|
test
|
trunk
|
#46 |
median functions should be coherent
|
Peter
|
defect
|
minor
|
statistics
|
|
#49 |
ConsensusInputRanker.add(InputRanker)
|
Peter
|
enhancement
|
minor
|
classifier
|
trunk
|
#71 |
Test that output from classifier::DataLook1D can be read by gslapi::vector
|
Markus Ringnér
|
defect
|
minor
|
test
|
trunk
|
#90 |
rows, columns, and size functions are redundant in Kernel
|
Peter
|
enhancement
|
minor
|
classifier
|
trunk
|
#91 |
Parameter class
|
Jari Häkkinen
|
enhancement
|
minor
|
utility
|
|
#98 |
is_int("1.2") returns true
|
Markus Ringnér
|
defect
|
minor
|
utility
|
|
#101 |
separate Score functionality from heavy ammo
|
Peter
|
request
|
minor
|
classifier
|
|
#126 |
Euclidean distance class
|
Peter
|
request
|
minor
|
statistics
|
trunk
|
#131 |
MatrixLookupWeighted constructor taking ONE utility::matrix
|
Markus Ringnér
|
request
|
minor
|
classifier
|
trunk
|
#134 |
BootstrapSampler
|
Peter
|
request
|
minor
|
classifier
|
trunk
|
#138 |
utility::matrix add function could be operator+=
|
Jari Häkkinen
|
request
|
minor
|
utility
|
trunk
|
#142 |
Scores from the Inputranker
|
Peter
|
enhancement
|
minor
|
classifier
|
trunk
|
#143 |
add access to InputRankers in ConsensusInputRanker
|
Peter
|
enhancement
|
minor
|
classifier
|
trunk
|
#152 |
get and set state of RNG
|
Jari Häkkinen
|
enhancement
|
minor
|
random
|
trunk
|
#183 |
Doxygen first page
|
Peter
|
enhancement
|
minor
|
documentation
|
trunk
|
#191 |
Avoid unnecessary vector copying in kNNI and WeNNI
|
Jari Häkkinen
|
enhancement
|
minor
|
utility
|
trunk
|
#194 |
minimize interface to matrix
|
Jari Häkkinen
|
enhancement
|
minor
|
utility
|
trunk
|
#195 |
minimize interface to vector
|
Jari Häkkinen
|
enhancement
|
minor
|
utility
|
trunk
|
#34 |
implement << for std::vector
|
Jari Häkkinen
|
enhancement
|
trivial
|
utility
|
trunk
|
#85 |
Forward declaration of string (check Scotts advise)
|
Jari Häkkinen
|
defect
|
trivial
|
utility
|
trunk
|
#97 |
copyright in test source
|
Jari Häkkinen
|
request
|
trivial
|
documentation
|
trunk
|
#125 |
KerneFunction remove obsolete operator() taking FOUR arguments
|
Peter
|
defect
|
trivial
|
classifier
|
trunk
|
#140 |
Don't keep SVM and Index in same file
|
Peter
|
request
|
trivial
|
documentation
|
trunk
|
#209 |
svd_test uses operator|=
|
Jari Häkkinen
|
defect
|
trivial
|
test
|
|
#213 |
should we remove minmax_index
|
Jari Häkkinen
|
request
|
trivial
|
utility
|
trunk
|