#77 |
Doxygen document linear regression
|
Peter
|
request
|
major
|
yat 0.2
|
documentation
|
#78 |
Document MultiDimensional
|
Peter
|
request
|
major
|
yat 0.2
|
documentation
|
#79 |
Document statistics::tScore::score()
|
Peter
|
defect
|
major
|
|
documentation
|
#80 |
Change implementation of utility::FileIO::file_exists()
|
Jari Häkkinen
|
defect
|
major
|
yat 0.2
|
utility
|
#81 |
Make the regression classes uniform
|
Peter
|
request
|
major
|
yat 0.2
|
regression
|
#86 |
SVM should use a MatrixLookup (and not KernelLookup) when feature selection is used.
|
Peter
|
enhancement
|
major
|
yat 0.3 (Public release)
|
classifier
|
#88 |
Add SAM Score class
|
Peter
|
request
|
major
|
yat 0.2
|
statistics
|
#89 |
document DataLookup2D
|
Peter
|
request
|
major
|
|
classifier
|
#95 |
ownership in Lookups is not optimal
|
Peter
|
enhancement
|
major
|
yat 0.3 (Public release)
|
classifier
|
#99 |
document CommandLine class
|
Peter
|
request
|
major
|
|
documentation
|
#100 |
gslapi::matrix::nan()
|
Markus Ringnér
|
request
|
major
|
yat 0.2
|
classifier
|
#102 |
bool is_weighted() function in DataLook2D
|
Peter
|
request
|
major
|
yat 0.2
|
classifier
|
#103 |
Sampler should be abstract
|
Peter
|
defect
|
major
|
yat 0.2
|
classifier
|
#105 |
remove asserts in header files
|
Peter
|
defect
|
major
|
yat 0.3 (Public release)
|
classifier
|
#106 |
Disconnect SupervisedClassifier from SubsetGenerator
|
Peter
|
request
|
major
|
yat 0.2
|
classifier
|
#108 |
dynamic_cast in SubsetGenerator using featureSelection
|
Peter
|
specification
|
major
|
yat 0.2
|
classifier
|
#110 |
InputRanker interface: MatrixLookup and MatrixLookupWeighted
|
Peter
|
specification
|
major
|
yat 0.2
|
classifier
|
#111 |
DataLookup1DWeighted
|
Peter
|
request
|
major
|
yat 0.2
|
classifier
|
#112 |
Score classes taking DataLookup1DWeighted
|
Peter
|
defect
|
major
|
yat 0.2
|
classifier
|
#113 |
remove feature selection stuff from SupervisedClassifier
|
Peter
|
defect
|
major
|
yat 0.2
|
classifier
|
#114 |
remove feature selection stuff from NCC
|
Peter
|
defect
|
major
|
yat 0.2
|
classifier
|
#115 |
remove feature selection stuff from SVM
|
Peter
|
defect
|
major
|
yat 0.2
|
classifier
|
#116 |
use MatrixLookupWeighted in Kernel
|
Peter
|
request
|
major
|
yat 0.2
|
classifier
|
#117 |
remove temporary interface in InputRanker with two MatrixLookup
|
Peter
|
defect
|
major
|
yat 0.2
|
classifier
|
#118 |
Overhaul of configure.ac
|
Jari Häkkinen
|
enhancement
|
major
|
yat 0.4
|
build
|
#119 |
NCC and weights
|
Markus Ringnér
|
request
|
major
|
yat 0.2
|
classifier
|
#120 |
remove weights in SubsetGenerator
|
Peter
|
defect
|
major
|
yat 0.2
|
classifier
|
#122 |
support feature selection in SubsetGenerator with Kernel built from MatrixLookupWeighted
|
Peter
|
enhancement
|
major
|
yat 0.2
|
classifier
|
#124 |
overload operator() in KernelFunction
|
Peter
|
enhancement
|
major
|
yat 0.2
|
classifier
|
#128 |
Averagers should have interface against iterators
|
Peter
|
request
|
major
|
yat 0.4
|
statistics
|
#129 |
avoid kernels in NCC
|
Markus Ringnér
|
request
|
major
|
yat 0.2
|
classifier
|
#133 |
documentation bugs
|
Peter
|
defect
|
major
|
yat 0.3 (Public release)
|
documentation
|
#135 |
Update documentation on DataLookup2D and daughter classes
|
Peter
|
enhancement
|
major
|
yat 0.3 (Public release)
|
documentation
|
#136 |
Reference counter in Kernel
|
Peter
|
enhancement
|
major
|
yat 0.3 (Public release)
|
classifier
|
#137 |
"include" information in Doxygen
|
Peter
|
request
|
major
|
|
documentation
|
#145 |
Clean up interface of DataLookup2D (and daughters)
|
Peter
|
enhancement
|
major
|
yat 0.2
|
classifier
|
#146 |
remove selected() in Kernel - use make_kernel() instead
|
Peter
|
enhancement
|
major
|
yat 0.2
|
classifier
|
#149 |
Target constructor from Target and vector<string>
|
Peter
|
request
|
major
|
yat 0.4
|
classifier
|
#151 |
ConsensusInputRanker more flexible
|
Peter
|
request
|
major
|
yat 0.3 (Public release)
|
classifier
|
#153 |
Change namespace hierarchy
|
Jari Häkkinen
|
request
|
major
|
yat 0.2
|
statistics
|
#154 |
clarify Target::labels()
|
Peter
|
enhancement
|
major
|
yat 0.2
|
documentation
|
#155 |
Current vector implementation can cause "unexpected" runtime aborts if bad programs are created.
|
Jari Häkkinen
|
enhancement
|
major
|
yat 0.3 (Public release)
|
utility
|
#156 |
Two-sided vs One-sided P-values in ROC
|
Peter
|
defect
|
major
|
yat 0.3 (Public release)
|
statistics
|
#158 |
Check implementation of OneDimensional
|
Peter
|
request
|
major
|
yat 0.2
|
regression
|
#159 |
NaiveWeighted::standard_error
|
Peter
|
request
|
major
|
yat 0.2
|
regression
|
#160 |
LinearWeighted::standard_error
|
Peter
|
request
|
major
|
yat 0.2
|
regression
|
#161 |
PolynomialWeighted::standard_error
|
Peter
|
request
|
major
|
yat 0.2
|
regression
|
#162 |
add test of documentation
|
Peter
|
enhancement
|
major
|
yat 0.5
|
test
|
#163 |
calculate mse in Polynomial::fit()
|
Peter
|
defect
|
major
|
yat 0.2
|
regression
|
#164 |
calculate mse in PolynomialWeighted::fit()
|
Peter
|
defect
|
major
|
yat 0.2
|
regression
|
#165 |
Is Linear == Polynomial(1)
|
Peter
|
request
|
major
|
yat 0.2
|
regression
|
#166 |
Is LinearWeighted == PolynomialWeighted(1)?
|
Peter
|
request
|
major
|
yat 0.2
|
regression
|
#167 |
calculate mse in LinearWeighted::fit()
|
Peter
|
request
|
major
|
yat 0.2
|
regression
|
#168 |
Calculate mse_ in PolynomialWeighted::fit()
|
Peter
|
defect
|
major
|
yat 0.2
|
regression
|
#169 |
Use MTL for Vector and Matrix
|
Jari Häkkinen
|
discussion
|
major
|
|
utility
|
#170 |
Move inline directive in all headers and move constructor/destructor definitions in headers to .cc.
|
Jari Häkkinen
|
enhancement
|
major
|
yat 0.3 (Public release)
|
classifier
|
#171 |
Go through all comments with Jari requests.
|
Jari Häkkinen
|
defect
|
major
|
yat 0.2
|
utility
|
#173 |
Optimize return values from member functions of PCA and related classes
|
Jari Häkkinen
|
defect
|
major
|
yat 0.3 (Public release)
|
utility
|
#176 |
FeatureSelection with Ensemble
|
Peter
|
defect
|
major
|
yat 0.2
|
classifier
|
#177 |
return variance rather than std in regression
|
Peter
|
defect
|
major
|
yat 0.2
|
regression
|
#178 |
MultiDimensionalWeighted and GSL
|
Peter
|
request
|
major
|
yat 0.2
|
regression
|
#179 |
DiscreteUniform(const u_long n);
|
Jari Häkkinen
|
defect
|
major
|
yat 0.3 (Public release)
|
random
|
#182 |
Implement Nearest Neighbour Classifier
|
Markus Ringnér
|
request
|
major
|
yat 0.4
|
classifier
|
#185 |
make copyright statement uniform
|
Peter
|
enhancement
|
major
|
yat 0.3 (Public release)
|
documentation
|
#186 |
DiscreteUniform::operator(u_long) problem checking bounds.
|
Jari Häkkinen
|
defect
|
major
|
yat 0.3 (Public release)
|
random
|
#187 |
Add a compiler flag to remove checks for GSL errors?
|
|
enhancement
|
major
|
|
build
|
#190 |
utility::vector and utility::matrix expects quiet_NaN is supported but it might not be.
|
Jari Häkkinen
|
defect
|
major
|
yat 0.4
|
build
|
#196 |
Propagate version number to doxygen.config using the make system.
|
Jari Häkkinen
|
defect
|
major
|
yat 0.3 (Public release)
|
documentation
|
#197 |
connect Project number in doxygen.config with version number in configure.ac
|
Markus Ringnér
|
request
|
major
|
yat 0.3 (Public release)
|
classifier
|
#198 |
add test for Distance classes
|
Peter
|
request
|
major
|
yat 0.3 (Public release)
|
statistics
|
#200 |
utility::vector add function could be operator+=
|
Jari Häkkinen
|
request
|
major
|
yat 0.3 (Public release)
|
utility
|
#202 |
Matrix View
|
Peter
|
enhancement
|
major
|
yat 0.20
|
utility
|
#204 |
Potentially dangerous usage of references to external objects in !ContinuousGeneral
|
Peter
|
defect
|
major
|
yat 0.3 (Public release)
|
random
|
#206 |
is matrix:set(const matrix&) needed?
|
Jari Häkkinen
|
enhancement
|
major
|
yat 0.3 (Public release)
|
utility
|
#207 |
Doxygen documentation style
|
Peter
|
defect
|
major
|
yat 0.4
|
documentation
|
#210 |
Distance should take DataLookupWeighted1D
|
Peter
|
enhancement
|
major
|
yat 0.4
|
statistics
|
#212 |
change interface of tTest
|
Peter
|
request
|
major
|
yat 0.3 (Public release)
|
classifier
|
#214 |
test that all input output operator work together
|
Peter
|
request
|
major
|
yat 0.5
|
test
|
#217 |
make check make dist make distcheck
|
Peter
|
defect
|
major
|
yat 0.4
|
build
|
#218 |
config.h should be installed
|
Jari Häkkinen
|
defect
|
major
|
yat 0.4
|
build
|
#219 |
Documentation is not distributed.
|
Peter
|
defect
|
major
|
yat 0.4
|
build
|
#221 |
Compilation of ROC class generates a warning
|
Peter
|
defect
|
major
|
yat 0.3.1
|
build
|
#223 |
test contain comparison of doubles with the == operator
|
Peter
|
defect
|
major
|
yat 0.4
|
test
|
#224 |
Test Suite Class
|
Jari Häkkinen
|
request
|
major
|
yat 0.4
|
test
|
#225 |
Add contact information for the yat project on the trac pages.
|
Peter
|
enhancement
|
major
|
yat 0.4
|
documentation
|
#228 |
RNG is not Singleton
|
Jari Häkkinen
|
defect
|
major
|
yat 0.4
|
build
|
#229 |
delete RNG results in a bus error
|
Jari Häkkinen
|
defect
|
major
|
yat 0.4
|
random
|
#230 |
Use variables in namespace AM_
|
Jari Häkkinen
|
request
|
major
|
yat 0.4
|
build
|
#232 |
trac has moved - correct all links to this site
|
Jari Häkkinen
|
defect
|
major
|
yat 0.4
|
documentation
|
#233 |
Links to documentation are broken
|
Jari Häkkinen
|
defect
|
major
|
yat 0.5
|
documentation
|
#234 |
KernelLookup should not be inherited from DataLookup2D
|
Peter
|
enhancement
|
major
|
yat 0.4
|
classifier
|
#235 |
SNR score objects can not be created
|
Markus Ringnér
|
defect
|
major
|
yat 0.4
|
statistics
|
#237 |
NCC::predict is incorrect for weights (not equal zero or unity)
|
Markus Ringnér
|
defect
|
major
|
yat 0.4
|
classifier
|
#238 |
clone function in DataLookup2D returning pointer to new DataLookup2D based on subset of features
|
Peter
|
defect
|
major
|
yat 0.4
|
classifier
|
#240 |
CommandLine class
|
Peter
|
request
|
major
|
yat 0.4
|
utility
|
#242 |
Test data files get installed in /usr/local/share
|
Jari Häkkinen
|
defect
|
major
|
yat 0.4
|
build
|
#243 |
Unexpected version numbering of installed libraries
|
Jari Häkkinen
|
defect
|
major
|
yat 0.4
|
build
|
#244 |
Iterators for 1D containers
|
Peter
|
request
|
major
|
yat 0.4
|
utility
|
#245 |
Distance should take Iterators
|
Peter
|
defect
|
major
|
yat 0.4
|
statistics
|
#246 |
Averager classes should have interface for Iterators
|
Peter
|
request
|
major
|
yat 0.4
|
statistics
|