#252 |
value is not set properly in Iterator
|
Peter
|
defect
|
minor
|
yat 0.4
|
utility
|
#254 |
Document distance, euclidean_distance, ...
|
Markus Ringnér
|
request
|
minor
|
yat 0.4
|
documentation
|
#255 |
Our iterators should use the special std base class iterator<>
|
Peter
|
defect
|
minor
|
yat 0.4
|
utility
|
#257 |
matrix does not accept "-inf"
|
Jari Häkkinen
|
enhancement
|
minor
|
yat 0.4
|
utility
|
#260 |
DataLookup2D should have a operator<<
|
Markus Ringnér
|
enhancement
|
minor
|
yat 0.4
|
classifier
|
#262 |
Add section on Distance in weighted statistics document
|
Peter
|
request
|
minor
|
yat 0.4
|
documentation
|
#264 |
Score in InputRanker
|
Peter
|
enhancement
|
minor
|
yat 0.4
|
classifier
|
#266 |
what is statistics::add in utility.h doing?
|
Peter
|
enhancement
|
minor
|
|
statistics
|
#267 |
iterator for 2D Lookups
|
Peter
|
enhancement
|
minor
|
yat 0.4
|
classifier
|
#268 |
SupervisedClassifier should return void
|
Peter
|
enhancement
|
minor
|
yat 0.4
|
classifier
|
#271 |
NBC trains incorrectly when have total zero weight for a feature
|
Peter
|
defect
|
minor
|
yat 0.4
|
classifier
|
#272 |
vector_distance is not an optimal name
|
Markus Ringnér
|
enhancement
|
minor
|
yat 0.4
|
statistics
|
#273 |
`make doc` should run Makefile in generated latex directory
|
Peter
|
enhancement
|
minor
|
yat 0.4
|
build
|
#277 |
Averager clone holding more information
|
Peter
|
discussion
|
minor
|
|
statistics
|
#280 |
when GSL or other needed things are not found configure should fail
|
Jari Häkkinen
|
enhancement
|
minor
|
yat 0.4
|
build
|
#291 |
vector::resize does not behave like std::vector
|
Peter
|
discussion
|
minor
|
yat 0.4
|
utility
|
#300 |
PCA sorts eigen vectors using N*N algo
|
Peter
|
defect
|
minor
|
yat 0.5
|
utility
|
#307 |
Change name of utility::vector to utility::Vector
|
Peter
|
request
|
minor
|
yat 0.4
|
utility
|
#308 |
Change name of utility::matrix to utility::Matrix
|
Peter
|
request
|
minor
|
yat 0.4
|
utility
|
#319 |
link to Doxygen documentation trunk version is broken
|
Jari Häkkinen
|
defect
|
minor
|
yat 0.4
|
documentation
|
#322 |
Classes templatized on Distance should take Distance in constructor
|
Markus Ringnér
|
enhancement
|
minor
|
yat 0.4
|
classifier
|
#323 |
Where should we document concepts?
|
Markus Ringnér
|
discussion
|
minor
|
yat 0.4
|
documentation
|
#324 |
meta-function taking (un)weighted_type and return Averager (or AveragerWeighted)
|
Peter
|
request
|
minor
|
yat 0.5
|
statistics
|
#325 |
rewrite weighted statistics class in doxygen format
|
Peter
|
enhancement
|
minor
|
yat 0.4
|
documentation
|
#327 |
test that matrix::row_view(i).begin() == matrix::begin_row(i)
|
Peter
|
request
|
minor
|
yat 0.4
|
test
|
#330 |
use convert in istream constructor for Vector a Matrix
|
Peter
|
enhancement
|
minor
|
yat 0.5
|
utility
|
#331 |
differentiate "make doc"
|
Peter
|
enhancement
|
minor
|
yat 0.4
|
build
|
#335 |
training on empty classes in NCC/KNN/NBC
|
Peter
|
defect
|
minor
|
yat 0.4
|
classifier
|
#336 |
avoid including installed yat
|
Jari Häkkinen
|
enhancement
|
minor
|
|
build
|
#337 |
log and exp functors
|
Peter
|
defect
|
minor
|
yat 0.5
|
utility
|
#341 |
Document SubsetGenerator and EnsembleBuilder
|
Peter
|
enhancement
|
minor
|
yat 0.4
|
documentation
|
#348 |
AveragerPairWeighted::correlation return inf and -inf
|
Peter
|
defect
|
minor
|
|
statistics
|
#349 |
use autoconf macro acx_blas?
|
Peter
|
enhancement
|
minor
|
yat 0.6
|
build
|
#350 |
function to calculate t-score-pvalue from t-score and dof
|
Peter
|
enhancement
|
minor
|
yat 0.5
|
statistics
|
#351 |
Estimating parameter p (and confidence interval) in binomial distribution
|
Peter
|
request
|
minor
|
|
statistics
|
#353 |
create yat-config script
|
Peter
|
request
|
minor
|
yat 0.5
|
build
|
#360 |
template function to check if a string is convertable to a specific numerical type
|
Peter
|
request
|
minor
|
yat 0.5
|
utility
|
#362 |
run-time version check function
|
Peter
|
request
|
minor
|
yat 0.5
|
utility
|
#367 |
preprocessor guards for deprecated functions
|
Peter
|
request
|
minor
|
yat 0.5
|
build
|
#372 |
version.h is not found by doxygen (when using VPATH)
|
Jari Häkkinen
|
defect
|
minor
|
yat 0.5
|
build
|
#375 |
send dogygen error message to a file
|
Peter
|
request
|
minor
|
yat 0.5
|
documentation
|
#376 |
configure reports flag info that may be misleading
|
Jari Häkkinen
|
defect
|
minor
|
yat 0.5
|
build
|
#379 |
Document how output created by OptionHelp
|
Peter
|
enhancement
|
minor
|
yat 0.4.2
|
documentation
|
#380 |
Default argument in OptionArg
|
Peter
|
enhancement
|
minor
|
yat 0.5
|
utility
|
#384 |
what are the dependcy on 'make doc'
|
Peter
|
enhancement
|
minor
|
|
build
|
#393 |
precision is hard-coded to 12 in output operator for Matrix and friends
|
Peter
|
enhancement
|
minor
|
yat 0.6
|
utility
|
#398 |
deprecate IteratorPolicy
|
Peter
|
request
|
minor
|
yat 0.5
|
utility
|
#399 |
statistics::mad only works with unweighted iterators
|
Peter
|
defect
|
minor
|
yat 0.6
|
statistics
|
#403 |
i686-apple-darwin8-g++-4.0.1: unrecognized option '-pthread'
|
Peter
|
defect
|
minor
|
yat 0.5
|
build
|
#404 |
test that compiler flags work with compiler
|
Jari Häkkinen
|
defect
|
minor
|
yat 0.5
|
build
|
#405 |
yat-config --cppflags return -DNDEBUG
|
Peter
|
discussion
|
minor
|
yat 0.5
|
build
|
#407 |
add tTest::reset() function
|
Peter
|
enhancement
|
minor
|
yat 0.5
|
statistics
|
#409 |
"command not found" - from make doc
|
Peter
|
enhancement
|
minor
|
yat 0.5
|
build
|
#413 |
Commandline: args must be associated with an option
|
Peter
|
enhancement
|
minor
|
yat 0.5
|
utility
|
#414 |
Commandline doesnt warn when adding two options with same name
|
Jari Häkkinen
|
defect
|
minor
|
yat 0.5
|
utility
|
#421 |
functor check for nan
|
Peter
|
request
|
minor
|
yat 0.5
|
utility
|
#427 |
docs generation needs doxygen 1.5 or later
|
Jari Häkkinen
|
defect
|
minor
|
yat 0.5
|
build
|
#430 |
AC_C_INLINE and -DHAVE_INLINE
|
Peter
|
enhancement
|
minor
|
yat 0.5
|
build
|
#431 |
AC_CHECK_HEADERS([unistd.h])
|
Jari Häkkinen
|
discussion
|
minor
|
yat 0.5
|
build
|
#432 |
version.h is distributed
|
Peter
|
defect
|
minor
|
yat 0.5
|
build
|
#435 |
avoid using -m64 if possible
|
Jari Häkkinen
|
enhancement
|
minor
|
yat 0.6
|
build
|
#441 |
creation of yat-config and yat.pc ignores make args such as --prefix
|
Peter
|
defect
|
minor
|
yat 0.5
|
build
|
#442 |
Centralizer should handle weighted iterator
|
Peter
|
enhancement
|
minor
|
yat 0.5
|
normalizer
|
#443 |
Zscore should handle weighted iterators
|
Peter
|
enhancement
|
minor
|
yat 0.5
|
normalizer
|
#447 |
move internal stuff to sub-directory detail
|
Jari Häkkinen
|
request
|
minor
|
yat 0.5
|
utility
|
#448 |
Document Container2D concept
|
Peter
|
request
|
minor
|
yat 0.5
|
documentation
|
#452 |
analytical p-value for KS-statistics
|
Peter
|
request
|
minor
|
yat 0.5
|
statistics
|
#453 |
avoid self-assignment of weights in 1D-normalizers
|
Peter
|
enhancement
|
minor
|
|
normalizer
|
#462 |
add sorted range to KS
|
Peter
|
request
|
minor
|
yat 0.5
|
statistics
|
#470 |
avoid using test::Suite::equal when comparing with value from file
|
Peter
|
defect
|
minor
|
yat 0.5
|
test
|
#473 |
disallow assignment of interpolation claases
|
Peter
|
request
|
minor
|
yat 0.5
|
regression
|
#475 |
upgrade to automake 1.11
|
Peter
|
request
|
minor
|
yat 0.7
|
build
|
#478 |
Generalize qQuantileNormalizer to work also on weighted data
|
Peter
|
discussion
|
minor
|
yat 0.5
|
normalizer
|
#480 |
missing operator- for DataIterator
|
Peter
|
defect
|
minor
|
yat 0.5
|
utility
|
#484 |
install-hook in build_support does not work on mac
|
Jari Häkkinen
|
defect
|
minor
|
yat 0.5
|
build
|
#485 |
yat-config --cppflags returns `-DGSL_RANGE_CHECK_OFF` and `-DNDEBUG`
|
Peter
|
defect
|
minor
|
yat 0.5
|
build
|
#497 |
distinguish LIBS and LIBS.private in yat.pc
|
Peter
|
defect
|
minor
|
|
build
|
#502 |
clarify what KolmogorovSmirnov::signed_score returns
|
Peter
|
enhancement
|
minor
|
yat 0.5.2
|
documentation
|
#504 |
remove default value for second argument 'msg' in yat_assert
|
Peter
|
request
|
minor
|
yat 0.6
|
utility
|
#505 |
avoid polluting commandline with -I/usr/include and -L/usr/lib
|
Peter
|
enhancement
|
minor
|
yat 0.6
|
build
|
#506 |
change 'SVM::max_epochs' to be unsigned
|
Peter
|
defect
|
minor
|
yat 0.6
|
classifier
|
#508 |
Commandline throws exception without message
|
Peter
|
defect
|
minor
|
yat 0.5.2
|
utility
|
#509 |
bootstrap fails updating libtool script
|
Peter
|
defect
|
minor
|
|
build
|
#514 |
concept: Weighted Iterator or unweighted with value type convertible to double.
|
Peter
|
request
|
minor
|
yat 0.6
|
documentation
|
#522 |
yat-config should honor environment variable YAT_CBLAS_LIB
|
Peter
|
request
|
minor
|
yat 0.6
|
build
|
#523 |
add support for option --libs-without-cblas in yat-config
|
Peter
|
request
|
minor
|
yat 0.6
|
build
|
#524 |
add configure option --with-cblas in yat's configure
|
Peter
|
request
|
minor
|
yat 0.6
|
build
|
#540 |
EnsembleBuilder::validate triggers assert when EB is built with one class having zero number of samples
|
Peter
|
defect
|
minor
|
yat 0.6
|
classifier
|
#545 |
doc claims median only works with unweighted iterators
|
Peter
|
defect
|
minor
|
yat 0.5.4
|
documentation
|
#551 |
alpha_var() and beta_var() in regression::Linear claims to return standard deviation
|
Peter
|
defect
|
minor
|
yat 0.6
|
documentation
|
#556 |
make Histogram output complete - allow construction of an object from the output
|
Peter
|
enhancement
|
minor
|
yat 0.7
|
statistics
|
#564 |
gcc complains about long long when compiling against Boost 1.40
|
Peter
|
defect
|
minor
|
yat 0.5.5
|
build
|
#572 |
GCC 4.3 complains about deprecated conversion from string constant to char*
|
Peter
|
defect
|
minor
|
yat 0.6
|
test
|
#580 |
test and document iterator type in Centralizer
|
Peter
|
request
|
minor
|
yat 0.6
|
test
|
#581 |
test and document iterator type in ColumnNormalizer and RowNormalizer
|
Peter
|
request
|
minor
|
yat 0.6
|
test
|
#582 |
test and document iterator type in Gauss
|
Peter
|
request
|
minor
|
yat 0.6
|
test
|
#583 |
test and document iterator type in Spearman
|
Peter
|
request
|
minor
|
yat 0.6
|
test
|
#584 |
test and document iterator type in qQuantileNormalizer
|
Peter
|
defect
|
minor
|
yat 0.6
|
test
|
#585 |
test and document iterator type in Average
|
Peter
|
request
|
minor
|
yat 0.6
|
test
|
#586 |
test and document iterator type in Averager
|
Peter
|
defect
|
minor
|
yat 0.6
|
test
|