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Ticket Summary Owner Type Priority Milestone Component
#595 test and document iterator types in functions in statistics/utility.h Peter request minor yat 0.6 test
#596 test and document types in Container2DIterator Peter request minor yat 0.7 test
#597 test and document DataWeightProxy with trivial iterator Peter request minor yat 0.6 test
#598 test and document iterator type in StrideIterator Peter request minor yat 0.6 test
#599 document DataIterator and WeightIterator Peter request major yat 0.6 documentation
#600 test and document container type in merge Peter request minor yat 0.7 test
#601 test and document iterator type in sort_index Peter request minor yat 0.6 test
#602 test and document iterator type in inverse Peter request minor yat 0.6 test
#603 Upgrade boost version requirmeent to 1.35 Peter discussion critical yat 0.6 test
#604 iterator_traits does not work when data_type is convertible to DataWeight Peter enhancement major yat 0.6 utility
#606 utility::WeightedIterator lacks default constructor Peter defect major yat 0.6 utility
#607 convenience function to get value from a const map& Peter request major yat 0.7 utility
#609 static_test.sh fails with 'CXX=c++-mp-4.3' Peter defect major yat 0.6 test
#612 Comparison functor for pointers Peter request major utility
#613 6 tests fail with old autotools Peter defect major yat 0.7 test
#614 yat macros do not work with Autoconf 2.59 Peter defect major yat 0.6.1 m4
#615 yat-config --ldflags do not include -L/$libdir Jari Häkkinen defect major yat 0.6.1 build
#616 cerrno exception class Peter request major yat 0.7 utility
#617 FileUtil::permission bug when file (in root dir) does not exist Peter defect minor yat 0.6.1 utility
#619 static_test should be skipped when no static libyat is built Peter enhancement minor yat 0.7 test
#620 use AC_CONFIG_HEADER to genrate yat/utility/version.h Jari Häkkinen enhancement minor yat 0.8 build
#622 no table in Container2D concept page Peter defect trivial yat 0.7 documentation
#623 StrideIterator<Concept2DIterator> fails boost concept check Peter defect major yat 0.7 utility
#624 add concept check class for concept DataIterator Peter request minor yat 0.7 utility
#625 add concept check class for concept Distance Peter request minor yat 0.7 utility
#626 add concept check class for concept Mutable_Container2D Peter request minor yat 0.7 utility
#627 add concept check class for concept Neighbor Weighting Method Peter request minor yat 0.7 utility
#628 doxygen shows private class (in CommandLine) Peter defect minor yat 0.7 documentation
#629 yat::random classes should comply with STL's concept Random Number Generator Peter enhancement minor yat 0.7 random
#630 HAVE_YAT is defined to /**/ Peter enhancement trivial yat 0.7 m4
#631 normalizer::Centralizer doesnt work with unweighted input and weighted output Peter defect major yat 0.7 normalizer
#632 PtrCompare is a special case of compose_f_gx_hy Peter request major yat 0.7 utility
#633 test and docs for DataIterator requirements Peter enhancement major yat 0.7 utility
#634 test and document requirements for WeightedIterator Peter request major yat 0.7 test
#635 class for a Segment Peter discussion major yat 0.7 utility
#636 "make distclean; ./configure; make clean;" fails Peter defect trivial yat 0.7 build
#637 Always detect `--help` option Peter enhancement major yat 0.8 utility
#638 overflow in Fisher Peter defect major yat 0.6.3 statistics
#639 PCA on a Kernel Matrix Peter request major yat 0.7 utility
#640 SegmentMap Peter request major yat 0.7 utility
#644 doxygen 1.7.2 complains about YAT_DEPRECATE Peter defect minor yat 0.7 documentation
#645 cmd_error with 'prog: : invalid argument' Peter enhancement trivial yat 0.7 utility
#646 change name of tests from *_test to *.test Peter enhancement trivial yat 0.7 test
#647 Parsing GFF files Peter request major yat 0.8 omic
#648 compiler warnings with gcc 4.4 Peter defect minor yat 0.7.1 build
#649 compilation error with gcc 3.4 Peter defect major yat 0.7.1 build
#650 tests fail with old autotools Peter defect major yat 0.8 test
#652 mention provided funtors that work with Centralizer Peter enhancement trivial yat 0.8 normalizer
#654 allow silent-rules? Peter request minor yat 0.8 build
#655 avoid expanding variables in yat.pc Peter request minor yat 0.8 build
#656 convert numerical type to string Peter request minor yat 0.8 utility
#657 make srcdir and builddir siblings in maintainer-check Peter enhancement trivial yat 0.8 m4
#658 doxygen warns: 'Found \endcond command without matching \cond' Peter defect trivial yat 0.7.2 documentation
#659 yat_am_macros (re)create files every time autoconf is run Peter enhancement minor yat 0.8 m4
#660 median crashes on empty range Peter defect minor yat 0.7.2 statistics
#662 create test/environment.h with AC_CONFIG_HEADERS Peter enhancement trivial yat 0.8 build
#663 boostrap silence error messages Peter enhancement major yat 0.7.2 build
#664 Codon("ATG").amino_acid() returns '\0' Peter defect major yat 0.7.2 omic
#665 @PACKAGE_URL@ not replaced on thep.lu.se Peter defect major yat 0.7.3 documentation
#666 Tukey biweight estimator Peter request major yat 0.8 statistics
#667 documentation missing for namespace classifier Peter defect minor yat 0.7.3 documentation
#668 test for yat_am_macros Peter request major yat 0.8 test
#669 ROC::p_value segmentation fault Peter defect major yat 0.7.3 statistics
#670 yat_am_macros tests fail Peter defect minor yat 0.8 test
#671 Increase accuracy in Averager Peter enhancement minor yat 0.8 statistics
#672 DNA assignment from char Peter request minor yat 0.8 omic
#674 deprecate seed functions in random base classes (Discrete Continuous)? Peter defect major yat 0.8 random
#675 document how to turn off deprecate warnings Peter enhancement minor yat 0.8 documentation
#677 When to use approximation for ROC p-value Peter defect minor yat 0.8 statistics
#678 ROC::p_value_one_sided returns small p-value for small area Peter defect major yat 0.8 statistics
#679 erase elements from SegmentMap Segment Set Peter request major yat 0.8 utility
#680 mutable find function in SegmentTree Peter request major yat 0.8 utility
#681 Missing deprecated list Peter defect minor yat 0.8 documentation
#683 configure says no doxygen found when old doxygen is found Peter defect trivial yat 0.9 build
#684 compiler icpc complains about -pedantic Peter defect minor yat 0.8 build
#685 compiler warning about default argument in utility::load Peter defect major yat 0.8 utility
#686 KS for one class Peter request major yat 0.11 statistics
#687 concept_check doesn't compile with gcc3 Jari Häkkinen defect major yat 0.8 build
#688 ROC and minus 1.0 weights Peter request major yat 0.9 statistics
#689 replace one_sided_P with lower_P and upper_P Peter request major yat 0.11 statistics
#691 document when views and iterators of Vector and Matrix are invalidated Peter request major yat 0.9 documentation
#693 use gsl_blas_ddot Peter request minor yat 0.9 utility
#694 use gsl_blas_dgemv Peter request minor yat 0.9 utility
#695 convert<unsigned int>("-1") does not throw Peter defect major yat 0.8 utility
#696 cache results in yat.m4 Peter enhancement trivial yat 0.9 m4
#697 attribute not updated in getline(istream&, GFF&) Peter defect major yat 0.8.1 omic
#698 SegmentTree docs has traces from SegmentSet Peter enhancement trivial yat 0.8.1 documentation
#699 YAT_SVN_RELEASE_YEAR: 'no such file or directory' warning Peter defect major yat 0.9 m4
#700 command_test fails when run as root Peter defect major yat 0.8.1 test
#702 ROC::p_value crashes Peter defect minor yat 0.9 statistics
#703 using a non-recursive Makefile Peter discussion major yat 0.9 build
#705 kurtosis and skewness from a Histogram Peter request major yat 0.9 statistics
#706 Generalization of Needleman-Wunsch and Smith-Waterman Peter request major yat 0.9 utility
#709 Averager operator+= gives incorreect mean and variance Peter defect major yat 0.8.2 statistics
#713 gcc 4.0.1 complains about -pthread Peter defect trivial yat 0.9 build
#714 The thread safe rng test fails to compile on MacOS Lion Jari Häkkinen defect major yat 0.9 test
#715 distcheck fails Peter defect trivial yat 0.8.2 build
#716 look for openblas in configure Peter request minor yat 0.11 build
#717 svndigest utilility functions Peter request major yat 0.10 utility
#718 remove convenience library Peter request minor yat 0.10 build
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