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Ticket Summary Owner Type Priority Milestone Component
#106 Disconnect SupervisedClassifier from SubsetGenerator Peter request major yat 0.2 classifier
#111 DataLookup1DWeighted Peter request major yat 0.2 classifier
#116 use MatrixLookupWeighted in Kernel Peter request major yat 0.2 classifier
#119 NCC and weights Markus Ringnér request major yat 0.2 classifier
#126 Euclidean distance class Peter request minor yat 0.3 (Public release) statistics
#128 Averagers should have interface against iterators Peter request major yat 0.4 statistics
#129 avoid kernels in NCC Markus Ringnér request major yat 0.2 classifier
#131 MatrixLookupWeighted constructor taking ONE utility::matrix Markus Ringnér request minor yat 0.3 (Public release) classifier
#134 BootstrapSampler Peter request minor yat 0.3 (Public release) classifier
#137 "include" information in Doxygen Peter request major documentation
#138 utility::matrix add function could be operator+= Jari Häkkinen request minor yat 0.3 (Public release) utility
#140 Don't keep SVM and Index in same file Peter request trivial yat 0.3 (Public release) documentation
#149 Target constructor from Target and vector<string> Peter request major yat 0.4 classifier
#151 ConsensusInputRanker more flexible Peter request major yat 0.3 (Public release) classifier
#153 Change namespace hierarchy Jari Häkkinen request major yat 0.2 statistics
#158 Check implementation of OneDimensional Peter request major yat 0.2 regression
#159 NaiveWeighted::standard_error Peter request major yat 0.2 regression
#160 LinearWeighted::standard_error Peter request major yat 0.2 regression
#161 PolynomialWeighted::standard_error Peter request major yat 0.2 regression
#165 Is Linear == Polynomial(1) Peter request major yat 0.2 regression
#166 Is LinearWeighted == PolynomialWeighted(1)? Peter request major yat 0.2 regression
#167 calculate mse in LinearWeighted::fit() Peter request major yat 0.2 regression
#178 MultiDimensionalWeighted and GSL Peter request major yat 0.2 regression
#182 Implement Nearest Neighbour Classifier Markus Ringnér request major yat 0.4 classifier
#184 Two versions of Doxygen pages. Jari Häkkinen request blocker yat 0.4 documentation
#198 add test for Distance classes Peter request major yat 0.3 (Public release) statistics
#200 utility::vector add function could be operator+= Jari Häkkinen request major yat 0.3 (Public release) utility
#212 change interface of tTest Peter request major yat 0.3 (Public release) classifier
#213 should we remove minmax_index Jari Häkkinen request trivial yat 0.3 (Public release) utility
#214 test that all input output operator work together Peter request major yat 0.5 test
#224 Test Suite Class Jari Häkkinen request major yat 0.4 test
#226 Create how to release document Jari Häkkinen request critical yat 0.4 documentation
#227 Generated documentation should end up in another directory Peter request critical yat 0.4 documentation
#240 CommandLine class Peter request major yat 0.4 utility
#244 Iterators for 1D containers Peter request major yat 0.4 utility
#246 Averager classes should have interface for Iterators Peter request major yat 0.4 statistics
#247 IteratorWeighted: Design and implementation Peter request major yat 0.4 utility
#254 Document distance, euclidean_distance, ... Markus Ringnér request minor yat 0.4 documentation
#256 vector matrix view design - could it be improved? Peter request critical yat 0.4 utility
#262 Add section on Distance in weighted statistics document Peter request minor yat 0.4 documentation
#269 MultiClassSVM Peter request major yat 0.6 classifier
#278 install documentation request major yat 0.4 build
#288 Quantile Normalization Peter request major yat 0.5 utility
#289 Kolmogorov Smirnov test Peter request major yat 0.4 statistics
#293 False Discovery Rate Peter request major yat 0.8 statistics
#299 redesign of matrix class Jari Häkkinen request critical yat 0.4 utility
#306 Iterators for utility::matrix Peter request major yat 0.4 utility
#307 Change name of utility::vector to utility::Vector Peter request minor yat 0.4 utility
#308 Change name of utility::matrix to utility::Matrix Peter request minor yat 0.4 utility
#309 templatize SubsetGenerator part I Peter request major yat 0.4 classifier
#310 remove DataLookup2D from SubsetGenerator Markus Ringnér request major yat 0.4 classifier
#311 templatize EnsembleBuilder Markus Ringnér request major yat 0.4 classifier
#312 SVM should not inherit from SupervisedClassifer Markus Ringnér request major yat 0.4 classifier
#313 SVM constructor should be void Peter request major yat 0.4 classifier
#315 Create a SmartPtr<T> class Peter request major yat 0.4 utility
#316 Create an Index class Peter request major yat 0.4 classifier
#317 Use classes Index in DataLookup2D Markus Ringnér request major yat 0.4 classifier
#318 SupervisedClassifier::train take data and target Markus Ringnér request major yat 0.4 classifier
#324 meta-function taking (un)weighted_type and return Averager (or AveragerWeighted) Peter request minor yat 0.5 statistics
#327 test that matrix::row_view(i).begin() == matrix::begin_row(i) Peter request minor yat 0.4 test
#333 Remove DataLookup2D in SupervisedClassifier interface Markus Ringnér request major yat 0.4 classifier
#340 slim down SupervisedClassifer Peter request major yat 0.4 classifier
#342 remove training_data() etc from interface of Lookups Peter request major yat 0.4 classifier
#343 remove DataLookup2D Peter request major yat 0.4 classifier
#353 create yat-config script Peter request minor yat 0.5 build
#354 automake and COPYING Jari Häkkinen request trivial yat 0.5 build
#359 Smooth histogram Peter request major yat 0.5 statistics
#360 template function to check if a string is convertable to a specific numerical type Peter request minor yat 0.5 utility
#362 run-time version check function Peter request minor yat 0.5 utility
#366 specialize percentile (and thereby median indirectly) for weighted iterators Peter request major yat 0.5 statistics
#367 preprocessor guards for deprecated functions Peter request minor yat 0.5 build
#368 create weighted iterator from two unweighted iterators Peter request major yat 0.5 utility
#369 create unweighted iterator from weighted iterator Peter request major yat 0.5 utility
#370 using boost Peter request blocker yat 0.5 build
#371 remove ax_prefix_config_h.m4 Peter request trivial yat 0.5 build
#375 send dogygen error message to a file Peter request minor yat 0.5 documentation
#377 class for nucleotides Peter request major yat 0.7 omic
#381 Generalize Kernel_MEV Peter request major yat 0.12 utility
#396 Interfacing MatrixWeighted with Matrix and MatrixLookupWeighted Peter request major yat 0.5 utility
#398 deprecate IteratorPolicy Peter request minor yat 0.5 utility
#406 svn repo and trac server location moved Peter request critical yat 0.4.2 build
#415 Merge 2D Container Peter request major yat 0.6 utility
#421 functor check for nan Peter request minor yat 0.5 utility
#436 Change license to GPL 3 Jari Häkkinen request major yat 0.5 documentation
#437 Rank Normalization Peter request major yat 0.5 normalizer
#439 sort_index for iterators Peter request major yat 0.5 utility
#444 iterators in lookups Peter request major yat 0.5 classifier
#445 All iterators with value type `DataWeight` should be weighted Peter request major yat 0.5 utility
#447 move internal stuff to sub-directory detail Jari Häkkinen request minor yat 0.5 utility
#448 Document Container2D concept Peter request minor yat 0.5 documentation
#449 Add tests to check Concepts Peter request major yat 0.6 test
#451 test yat.m4 Peter request major yat 0.5 test
#452 analytical p-value for KS-statistics Peter request minor yat 0.5 statistics
#462 add sorted range to KS Peter request minor yat 0.5 statistics
#467 disable implicit conversion between Vector and its View siblings Peter request critical yat 0.5 utility
#469 add doxygen tag "\since New in yat 0.5" in new interpolation classes Jari Häkkinen request trivial yat 0.5 documentation
#472 extend make release target Peter request major yat 0.5 build
#473 disallow assignment of interpolation claases Peter request minor yat 0.5 regression
#474 create Vector from temporary VectorView fails Peter request major yat 0.15 utility
#475 upgrade to automake 1.11 Peter request minor yat 0.7 build
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