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Ticket Summary Owner Type Priority Milestone Component
#320 templatize classifier::Kernel Peter discussion critical yat 0.x+ classifier
#92 EnsembleValidator Peter request major yat 0.x+ classifier
#150 microarray::DataSet Peter discussion major yat 0.x+ classifier
#175 Extend tests for ensembles Markus Ringnér request major yat 0.x+ classifier
#181 add a class for SAM Peter request major yat 0.x+ classifier
#215 weight information in InputRanker Peter enhancement major yat 0.x+ classifier
#258 Permutation test Peter enhancement major yat 0.x+ statistics
#270 Support for different methods to aggregate classifiers in EnsembleBuilder Markus Ringnér discussion major yat 0.x+ classifier
#296 non-random permutation test Peter request major yat 0.x+ statistics
#302 allow different normalizations in PCA Jari Häkkinen enhancement major yat 0.x+ utility
#346 Generalize NNI to utilize different metrics Jari Häkkinen enhancement major yat 0.x+ utility
#357 Function to calculate accuracy Markus Ringnér request major yat 0.x+ classifier
#364 Histogram cumulative distribution Peter enhancement major yat 0.x+ statistics
#397 Arithmetic for DataWeight Jari Häkkinen discussion major yat 0.x+ utility
#433 predict in regression::Local Peter enhancement major yat 0.x+ regression
#605 Add support to the BASE project BFS format Jari Häkkinen defect major yat 0.x+ utility
#643 Circular Iterator Adaptor Jari Häkkinen request major yat 0.x+ utility
#673 Chromosomes hard-wired in GenomicPosition Peter discussion major yat 0.x+ omic
#711 speed up exact p-value for small n in Kendall Peter enhancement major yat 0.x+ statistics
#773 Weighted version of Binomial LRT Peter request major yat 0.x+ statistics
#825 access Option from Commandline Jari Häkkinen request major yat 0.x+ utility
#835 Fast Matrix Transpose Jari Häkkinen discussion major yat 0.x+ utility
#891 mutable BamReadIterator Peter discussion major yat 0.x+ omic
#899 Scheduler::wait_for(int) Jari Häkkinen request major yat 0.x+ utility
#900 Job creating jobs Jari Häkkinen request major yat 0.x+ utility
#902 split SupervisedClassifer into weighted and non-weighted Markus Ringnér discussion major yat 0.x+ classifier
#923 train interpolation classes outside constructor Peter discussion major yat 0.x+ regression
#973 normalisation with on train and validation cohort Peter discussion major yat 0.x+ normalizer
#987 error: conversion from ‘VectorConstView’ to non-scalar type ‘Vector’ Jari Häkkinen defect major yat 0.x+ utility
#996 behaviour of VCF::add functions when key already exists Peter discussion major yat 0.x+ omic
#1000 multiprocess is restricted to input type and output type being the same Jari Häkkinen request major yat 0.x+ utility
#1004 Louvain Clustering Markus Ringnér request major yat 0.x+ classifier
#31 add Permutation test for weighted Score Peter enhancement minor yat 0.x+ statistics
#82 add BaseFileReader Jari Häkkinen request minor yat 0.x+ classifier
#139 Combinations of Target objects Peter request minor yat 0.x+ classifier
#141 unknown Target Peter request minor yat 0.x+ classifier
#231 read, digest, and adopt APR devel guidelines Jari Häkkinen enhancement minor yat 0.x+ documentation
#358 add iterators in Kernel class Peter request minor yat 0.x+ classifier
#373 Paramaterize how to calculate the average in Quantile Normalization Peter enhancement minor yat 0.x+ normalizer
#382 Create an Index object from a string in Target class Peter enhancement minor yat 0.x+ classifier
#401 Weighted Quantile Normalization Peter discussion minor yat 0.x+ normalizer
#422 add(first1, last1, first2) in regression::Local Peter enhancement minor yat 0.x+ regression
#428 yat.m4 and yat-config only work when installed Jari Häkkinen enhancement minor yat 0.x+ build
#541 access to prediction on training data in EnsembleBuilder Peter request minor yat 0.x+ classifier
#552 calculate entropy of a histogram Peter request minor yat 0.x+ statistics
#690 AveragerPair::sum_xy_centered unstable Peter defect minor yat 0.x+ statistics
#732 use AC_CONFIG_MACRO_DIRS Jari Häkkinen request minor yat 0.x+ build
#781 reimplement Averagers as wrappers around boost::accumulators Peter discussion minor yat 0.x+ statistics
#791 lock ostreams Peter discussion minor yat 0.x+ utility
#888 is it possible to call split/getvector in load functions? Jari Häkkinen discussion minor yat 0.x+ utility
#912 confidence interval for ROC::area() Peter request minor yat 0.x+ statistics
#969 std::shared_ptr and Scheduler Jari Häkkinen request minor yat 0.x+ utility
#1002 autoconf macro for plplot detection Peter request minor yat 0.x+ m4
#51 score object using SVM Peter request trivial yat 0.x+ classifier
#127 Use Distance::Euclidean in GaussianKernelFunction Peter enhancement trivial yat 0.x+ classifier
#400 add functions taking ranges should return object that is modified Peter enhancement trivial yat 0.x+ statistics
#618 redundancy in 'required' and dependency in Makefile.am Jari Häkkinen enhancement trivial yat 0.x+ build
#805 installed libyat linked in before local libyat Peter defect trivial yat 0.x+ build
#812 include autoconf macros in doxygen docs Peter discussion trivial yat 0.x+ documentation
#865 binary_weight doesn't work with proxy value type Jari Häkkinen defect trivial yat 0.x+ utility
#1006 Create SVD in PCA with move constructor Jari Häkkinen enhancement trivial yat 0.22 utility
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