Timeline



Mar 1, 2006:

3:11 PM Changeset [530] by Markus Ringnér
Fixed problems for empty target groups
3:03 PM Changeset [529] by Markus Ringnér
Added score for signal-to-noise ratio (Golub score). Fixed …
2:28 PM Changeset [528] by Peter
adding source files that were forgotten
12:23 PM Changeset [527] by Peter
Modified Kernel to be built from MatrixLookup? rather than …
9:49 AM Changeset [526] by Markus Ringnér
Fixed bug in tScore and in MatrixLookup?. Added support for scoring …

Feb 24, 2006:

5:29 PM Changeset [525] by Markus Ringnér
Added structure to Supervised classifier and NCC to support ranking …

Feb 23, 2006:

4:55 PM Changeset [524] by Peter
fixed bug PolynimialKernelFunction? - can now handle NaNs? with weights
4:54 PM Ticket #52 (Nan*0 treatment in GaussianKernelFunction) created by Peter
In the weighted version a weight of zero should always be ignored and …
2:27 PM Ticket #51 (score object using SVM) created by Peter
By training an SVM and calculating the feature sensitivity one can …
2:23 PM Ticket #50 (implement matrix.binary_weight(void)) closed by Peter
fixed: Done. Is implemented as matrix nan(void). Should perhaps be a void …
2:21 PM Ticket #49 (ConsensusInputRanker.add(InputRanker)) closed by Peter
fixed
9:52 AM Changeset [523] by Peter
add prediction functions to SVM
9:46 AM Changeset [522] by Peter
added function to add InputRanker? to ConsensusInputRanker?

Feb 22, 2006:

4:41 PM Changeset [521] by Peter
extended target and ensemble tests
4:01 PM Changeset [520] by Peter
changed internal representation in Target
10:28 AM Changeset [519] by Peter
percentile is now called percentile

Feb 21, 2006:

6:32 PM Changeset [518] by Peter
also adding the test for EnsembleBuilder?
5:35 PM Changeset [517] by Peter
fixed bug in DataLookup2D and created test for EnsembleBuilder?

Feb 20, 2006:

7:37 PM Changeset [516] by Peter
added function generating weight matrix with respect to not-a-number …
7:36 PM Changeset [515] by Peter
fixed indentation for doxygen
6:28 PM Ticket #50 (implement matrix.binary_weight(void)) created by Peter
function returning a matrix in which each element is set to unity …
10:45 AM Changeset [514] by Peter
generalised binary functionality in Target

Feb 18, 2006:

5:04 PM Ticket #38 (add weights to SVM (kernel)) closed by Peter
fixed: fixed by introducing two new classes. Chose having a forest of classes …
5:02 PM Changeset [513] by Peter
added kernels using weights
4:06 PM Changeset [512] by Peter
moved common member variables to base class Kernel
3:55 PM Ticket #39 (Fix NCC) closed by Peter
fixed: Fixed
3:49 PM Ticket #46 (median functions should be coherent) closed by Peter
fixed: Still use full sort since we in case of an even number of data points …
3:47 PM Ticket #45 (test median functions) closed by Peter
fixed: Fixed
3:46 PM Changeset [511] by Peter
added percentile function for gslapi::vector
3:21 PM Changeset [510] by Peter
fixed nan return in AveragerPair::ccc()
3:19 PM Ticket #43 (AveragerPair return 'nan' for some member functions when no data has ...) closed by Peter
fixed: Fixed it for concordance correlation coefficient.
2:57 PM Ticket #47 (CrossSplitter::validation_data does not return constant number of samples) closed by Peter
fixed: Fixed. The samples are divided into k groups. Each group is as …
2:47 PM Changeset [509] by Peter
added test for target redesign crossSplitter added two class function …

Feb 17, 2006:

1:08 AM Changeset [508] by Jari Häkkinen
Removed autotools directory that should not exist here (autotools …
1:02 AM Changeset [507] by Jari Häkkinen
Reverting these files to revision 505; these were changed by mistake.
12:56 AM Changeset [506] by Jari Häkkinen
Fixed spelling error.

Feb 16, 2006:

4:50 PM Ticket #49 (ConsensusInputRanker.add(InputRanker)) created by Peter
Add function adding an individual ranking from outside. In this way …

Feb 15, 2006:

4:12 AM Ticket #48 (implement SVM::predict) created by Peter
It is done for taking kernel or vector value, but should also take …

Feb 9, 2006:

10:26 AM WikiStart edited by Jari Häkkinen
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10:19 AM WikiStart edited by Jari Häkkinen
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Feb 2, 2006:

5:34 PM Changeset [505] by Markus Ringnér
Continuing with adding validation functionality to EnsembleBuilder?. …
11:44 AM Ticket #47 (CrossSplitter::validation_data does not return constant number of samples) created by Peter
It should not be constant but close. Find the bug and add test.

Feb 1, 2006:

2:44 PM Changeset [504] by Markus Ringnér
Test program for the nearest centroid classifier (ncc) parts of …
12:17 PM Changeset [503] by Markus Ringnér
First drafts for a distance interface and one implementation (Pearson)

Jan 30, 2006:

11:53 PM Ticket #44 (templates for median and percentile should not sort but rather require ...) closed by Peter
fixed: functions do not require sorted vectors, but there is an option to …
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11:09 PM TracInterfaceCustomization created by trac
11:05 PM Changeset [502] by Peter
improved median and percentile functions
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