Timeline
Mar 18, 2007:
- 11:18 PM Ticket #213 (should we remove minmax_index) created by
- implemented here …
- 5:44 PM Ticket #212 (change interface of tTest) created by
- Should be independent of the different containers. Use same design as …
- 5:35 PM Ticket #101 (separate Score functionality from heavy ammo) closed by
- fixed
- 5:00 PM Changeset [821] by
- Modified ROC class to use AUC class in calculation of ROC area. Refs #101
- 1:25 AM Ticket #211 (weighted ROC p-value does not equal permutation test p-value?) created by
- The title might not be true but it is not straight forward to work …
Mar 17, 2007:
- 10:54 PM Changeset [820] by
- Changed name again. ROCScore is now called AUC. Also fixed several …
- 2:21 AM Changeset [819] by
- 1:55 AM Changeset [818] by
- It depends on the use case here, but I think I agree so hist_ is no …
- 1:55 AM Ticket #204 (Potentially dangerous usage of references to external objects in ...) closed by
- fixed: (In [818]) It depends on the use case here, but I think I agree so …
- 1:39 AM Ticket #143 (add access to InputRankers in ConsensusInputRanker) closed by
- fixed: (In [817]) Fixes #143
- 1:39 AM Changeset [817] by
- Fixes #143
- 1:11 AM Ticket #198 (add test for Distance classes) closed by
- fixed: (In [816]) test for Distance. Fixes #198
- 1:11 AM Changeset [816] by
- test for Distance. Fixes #198
- 1:10 AM Changeset [815] by
- added constructor for DataLookup1D from a utility::vector
Mar 16, 2007:
- 11:22 PM Ticket #210 (Distance should take DataLookupWeighted1D) created by
- relates to ticket:237 could be implemented in base class as a virtual …
- 10:21 PM Ticket #66 (Add GaussianKernelFunction_test) closed by
- fixed: (In [814]) fixes #66
- 10:21 PM Changeset [814] by
- fixes #66
- 9:52 PM Ticket #209 (svd_test uses operator|=) created by
- In svd_test there are code like […] operator=| performs a bitwise …
- 8:30 PM Ticket #57 (implement Naive Baysian Classifier) closed by
- fixed: (In [813]) Predict in NBC. Fixes #57
- 8:30 PM Changeset [813] by
- Predict in NBC. Fixes #57
- 2:02 AM Changeset [812] by
- implemented NBC predict. Have to check what happens in the weighted …
- 2:00 AM Changeset [811] by
- dox
- 12:31 AM Changeset [810] by
- Changed to obey the general wisdom: If you write the same code snipet …
- 12:14 AM Ticket #208 (Update Requirements on wiki:start) created by
- What is needed to use yat? A compiler is not really enough is it? …
Mar 15, 2007:
- 11:47 PM Ticket #207 (Doxygen documentation style) created by
- I though there was a consensus on using the doxygen documentation …
- 11:44 PM Changeset [809] by
- Fixed spelling.
- 11:42 PM WikiStart edited by
- Added link to the CodingStyle? page (diff)
- 9:07 PM Ticket #205 (resize matrix) closed by
- fixed: (In [808]) previous argument was invalid, but here is an …
- 9:07 PM Changeset [808] by
- previous argument was invalid, but here is an implementation. Fixes #205
- 8:07 PM Ticket #206 (is matrix:set(const matrix&) needed?) created by
- Since the new implementation of assignment operator, I wonder if set …
- 8:02 PM Ticket #205 (resize matrix) created by
- I would like to have a resize function. In principle one can use …
- 7:24 PM Ticket #183 (Doxygen first page) closed by
- fixed: (In [807]) Ok, no comments from enyone so I assume it is ok to remove …
- 7:24 PM Changeset [807] by
- Ok, no comments from enyone so I assume it is ok to remove the list of …
Mar 14, 2007:
- 12:17 PM Changeset [806] by
- removed test as well :O
- 12:12 PM Changeset [805] by
- removed Option and Commandline. Not mature enough for a release. …
- 12:03 PM Changeset [804] by
- Creating a Sandbox
- 11:58 AM Changeset [803] by
- removed Microarray namespce and its conents
Mar 13, 2007:
- 1:05 PM Changeset [802] by
- removed styles sheet in config
- 12:52 PM Changeset [801] by
- and forgot another thing
- 12:37 PM Changeset [800] by
- 3:06 AM Ticket #196 (Propagate version number to doxygen.config using the make system.) closed by
- fixed: (In [799]) NOTE: you will probably need to rerun configure to create …
- 3:06 AM Changeset [799] by
- NOTE: you will probably need to rerun configure to create directory …
- 12:53 AM Ticket #186 (DiscreteUniform::operator(u_long) problem checking bounds.) closed by
- worksforme: This is not an issue.
- 12:52 AM Changeset [798] by
- Removed unnecessary #include. Added tests for random number distributions.
- 12:51 AM Ticket #204 (Potentially dangerous usage of references to external objects in ...) created by
- At approximately line 460 in source:trunk/yat/random/random.h there is …
Mar 12, 2007:
- 11:53 PM Ticket #191 (Avoid unnecessary vector copying in kNNI and WeNNI) closed by
- fixed: (In [797]) Fixes #191. This is the best that can be done with the …
- 11:53 PM Changeset [797] by
- Fixes #191. This is the best that can be done with the current design.
- 11:18 PM Ticket #201 (const matrix& matrix::operator*=(const matrix& other)) closed by
- fixed: (In [796]) Fixes #201.
- 11:18 PM Changeset [796] by
- Fixes #201.
- 1:48 PM Changeset [795] by
- confusing to use argv[0] since it is nout test/vector_test but rather …
- 1:45 PM Ticket #203 (tests don't compile) closed by
- worksforme
- 12:43 PM Ticket #203 (tests don't compile) created by
- 12:37 PM Changeset [794] by
- making yat compile
Mar 11, 2007:
- 4:40 PM Ticket #193 (Serious flaw: matrix mutation functionality and view does not work properly) closed by
- fixed: (In [793]) Fixes #193. Last test for the new functionality added to matrix.
- 4:40 PM Changeset [793] by
- Fixes #193. Last test for the new functionality added to matrix.
- 1:14 AM Changeset [792] by
- Addresses #193. matrix now works as outlined in the ticket discussion. …
- 1:12 AM Changeset [791] by
- Addresses #193. Added missing implementations.
Mar 10, 2007:
- 10:25 PM Ticket #202 (Matrix View) created by
- 10:19 PM Ticket #201 (const matrix& matrix::operator*=(const matrix& other)) created by
- The blas_matrix_ treatment is dangerous. If memory already allocated …
- 9:49 PM Changeset [790] by
- Addresses #193. Fixing doxygen docs, and operator=.
- 9:07 PM Changeset [789] by
- Addresses #193. vector now works as outlined here. Added some …
- 8:59 PM Changeset [788] by
- Improved comparison operator and equal function doxygen doc. Added for …
Mar 9, 2007:
- 9:02 PM trac_usage edited by
- Added iCalendar support information link. (diff)
- 10:40 AM Changeset [787] by
- removed v_const in vector since it never used for anything but only …
- 10:38 AM Changeset [786] by
- added a test in vector_test
Mar 8, 2007:
- 10:12 AM Changeset [785] by
- I think it is clearer if gsl_vector_const_view is declared as const …
Mar 6, 2007:
- 5:02 PM Changeset [784] by
- References #155. Removed potential null pointer usage. Some unwanted …
Mar 5, 2007:
- 10:45 PM Ticket #155 (Current vector implementation can cause "unexpected" runtime aborts if ...) closed by
- fixed: (In [783]) Fixes #155. Added asserts to check vectors in all non-const …
- 10:45 PM Changeset [783] by
- Fixes #155. Added asserts to check vectors in all non-const functions …
- 10:17 PM Ticket #195 (minimize interface to vector) closed by
- fixed: (In [782]) Fixes #195.
- 10:17 PM Changeset [782] by
- Fixes #195.
- 8:44 PM Changeset [781] by
- changing name to ROCScore and also added some cassert includes
- 8:30 PM Changeset [780] by
- Fixed exception message.
- 7:58 PM Changeset [779] by
- Refs #101
Mar 4, 2007:
- 2:20 PM Changeset [778] by
- added ROCscore class. refs #101
- 1:34 PM Changeset [777] by
- Changed Fisher interface dramatically. No longer inherited from Score. …
- 12:18 PM Changeset [776] by
- Fixed typos.
Mar 2, 2007:
- 12:53 AM Ticket #200 (utility::vector add function could be operator+=) closed by
- fixed: (In [775]) Fixes #200.
- 12:53 AM Changeset [775] by
- Fixes #200.
Mar 1, 2007:
- 10:52 PM Ticket #194 (minimize interface to matrix) closed by
- fixed: (In [774]) Fixes #194.
- 10:52 PM Changeset [774] by
- Fixes #194.
- 10:18 PM Ticket #200 (utility::vector add function could be operator+=) created by
- The functions below look pretty much like operator+=, don't they? …
- 9:20 PM Ticket #97 (copyright in test source) closed by
- fixed: The issue has already been resolved.
- 1:51 AM Ticket #138 (utility::matrix add function could be operator+=) closed by
- fixed: (In [773]) Fixes #138. Removed add, sub, scale and added appropriate …
- 1:51 AM Changeset [773] by
- Fixes #138. Removed add, sub, scale and added appropriate operators.
Feb 26, 2007:
- 1:08 AM Ticket #199 (NNI should use Euclidean) created by
- NNI calculates the distance between rows identical how it is done in …
Feb 25, 2007:
- 7:31 PM Ticket #198 (add test for Distance classes) created by
- 7:29 PM Ticket #126 (Euclidean distance class) closed by
- fixed: (In [772]) fixes #126 and added some functions in AveragerPair? and …
- 7:29 PM Changeset [772] by
- fixes #126 and added some functions in AveragerPair? and …
Feb 24, 2007:
- 1:36 PM Ticket #197 (connect Project number in doxygen.config with version number in ...) closed by
- duplicate: duplicate #196
- 11:06 AM Ticket #197 (connect Project number in doxygen.config with version number in ...) created by
- This is redundant information should be removed to avoid future FUs …
- 10:42 AM Ticket #196 (Propagate version number to doxygen.config using the make system.) created by
- issueing 'make doc' should use the version number from configure.ac in …
Feb 23, 2007:
- 10:31 PM Changeset [771] by
- Bumped version number.
- 10:29 PM Changeset [770] by
- Tagging version 0.2
- 10:26 PM Changeset [769] by
- Bumped version number.
Feb 22, 2007:
- 6:18 PM Changeset [768] by
- addresses #57
- 4:14 PM Ticket #65 (Add brief descriptions to classes) closed by
- fixed: (In [767]) Fixes #65
- 4:14 PM Changeset [767] by
- Fixes #65
- 4:11 PM Changeset [766] by
- added constructing view from utility::vector
- 4:07 PM Changeset [765] by
- Changed CVS repository to be subversion repository and corrected a typo
- 4:03 PM Changeset [764] by
- updated first page doxygen
- 3:54 PM Changeset [763] by
- added project number in doxygen. NOTE: this need to be bumbed at …
Feb 21, 2007:
- 9:33 PM Ticket #195 (minimize interface to vector) created by
- * Is add(const vector&) needed? since there is opererator+=(const …
- 9:09 PM Ticket #194 (minimize interface to matrix) created by
- ref #138 Make some matrix member functions to be external functions. …
Feb 20, 2007:
- 8:28 PM Ticket #193 (Serious flaw: matrix mutation functionality and view does not work properly) created by
- Several of the matrix mutable functions ignores the fact that a matrix …
- 8:18 PM Ticket #76 (gslapi::matrix) closed by
- fixed: (In [762]) Fixes #76. Creating/recreating BLAS support matrix only …
- 8:18 PM Changeset [762] by
- Fixes #76. Creating/recreating BLAS support matrix only when needed.
- 6:27 PM Ticket #69 (Overhaul of trac and doxygen documentation) closed by
- wontfix: Wilco.
- 6:26 PM Ticket #7 (Document theplu::utility::IO_error) closed by
- fixed: (In [761]) Fixes #7.
- 6:26 PM Changeset [761] by
- Fixes #7.
- 10:58 AM Ticket #26 (throw exception in statistics::Fisher) closed by
- fixed: (In [760]) throw exception when detecting invalid 2x2 table. Fixes #26
- 10:58 AM Changeset [760] by
- throw exception when detecting invalid 2x2 table. Fixes #26
Feb 19, 2007:
- 8:41 PM Ticket #171 (Go through all comments with Jari requests.) closed by
- fixed: (In [759]) Fixes #171 and addresses #2. A few more GSL_error …
- 8:41 PM Changeset [759] by
- Fixes #171 and addresses #2. A few more GSL_error exceptions. Removed …
- 8:38 PM Ticket #192 (kNNI and WeNNI has hard coded small numbers, change to something ...) created by
- source:trunk/yat/utility/kNNI.cc at approximately line 73: […] and …
- 8:34 PM Ticket #191 (Avoid unnecessary vector copying in kNNI and WeNNI) created by
- source:trunk/yat/utility/kNNI.cc at approximately line 60: […] and …
- 8:29 PM Ticket #190 (utility::vector and utility::matrix expects quiet_NaN is supported but ...) created by
- Somewhere we should check that quiet_NaNs are supported …
- 8:20 PM Ticket #189 (There are output to cerr in some library classes. Should these throw ...) created by
- If an exception is to be thrown, which exception should that be? An …
- 8:07 PM Ticket #188 (Use GSL defined round of errors?) created by
- As it is now we use hard coded error limits. See …
- 7:52 PM Ticket #2 (Add exceptions to gsl usage) closed by
- fixed: (In [758]) Fixes #2. Finalized adding GSL_error exceptions.
- 7:52 PM Changeset [758] by
- Fixes #2. Finalized adding GSL_error exceptions.
- 7:51 PM Changeset [757] by
- Fixed #include statemenst and forward declarations. asserts in headers …
- 7:26 PM Milestone yat 0.2 completed
- Various issues to be fixed.
- 7:14 PM Changeset [756] by
- Added missing #include
Feb 18, 2007:
- 1:01 AM Changeset [755] by
- Addresses #2 and #65. Continued adding GSL_error exceptions, and added …
Feb 17, 2007:
- 11:33 PM Changeset [754] by
- Addresses #2 and #65. Continued adding GSL_error exceptions, and added …
- 2:33 PM Changeset [753] by
- Addresses #2. Continued adding GSL_error exceptions.
- 2:01 PM Ticket #187 (Add a compiler flag to remove checks for GSL errors?) created by
- Or should these checks be implemented as assert calls? There are some …
- 1:43 PM Changeset [752] by
- Moving a function implementation from .h to .cc.
- 1:36 PM Ticket #186 (DiscreteUniform::operator(u_long) problem checking bounds.) created by
- In yat/random/random.cc: The if statement is difficult if n and max …
- 1:25 PM Changeset [751] by
- Addresses #2. Continued adding GSL_error exceptions.
- 11:56 AM Changeset [750] by
- Addresses #2. Continued adding GSL_error exceptions.
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