Timeline
Oct 6, 2007:
- 1:24 AM Ticket #264 (Score in InputRanker) closed by
-
fixed: (In [938])
Well Score is an abstract interface class so
const&will … - 1:24 AM Changeset [938] by
- improving constness correctness
- 1:15 AM Ticket #210 (Distance should take DataLookupWeighted1D) closed by
- wontfix: Distance has been replaced by template functions (see ticket:250)
- 1:11 AM Changeset [937] by
- changing name of IteratorTraits? to iterator_traits
- 1:02 AM Changeset [936] by
- reimplementing yat_assert as a throwing function
- 12:50 AM Ticket #267 (iterator for 2D Lookups) created by
- related to ticket:256 ticket:263 ticket:306 Instead of using …
Oct 5, 2007:
- 11:31 PM Changeset [935] by
- fixing doxygen problem
- 11:27 PM Changeset [934] by
- fixing bug when range is one value only
- 11:18 PM Ticket #265 (median should work on iterators (rather than std::vector)) closed by
- fixed: (In [932])
- 11:15 PM Changeset [933] by
- mad function now takes iterators
- 11:03 PM Changeset [932] by
- median and percentile functions now take iterators rather than vectors
- 10:58 PM Ticket #266 (what is statistics::add in utility.h doing?) created by
- needs ticket:292 Is these functions needed? Could we translate them …
- 10:03 PM Ticket #265 (median should work on iterators (rather than std::vector)) created by
- median is a special case of percentile and consequently percentile …
- 5:51 PM Ticket #249 (Euclidean returns squared value) closed by
- fixed
- 5:43 PM Ticket #250 (The new vector_distance structure should replace the old Distance ...) closed by
- fixed: The old Distance structure is removed in [931].
- 5:42 PM Changeset [931] by
- Working on ticket:259. Removed old Distance see ticket:250
Oct 4, 2007:
- 3:30 PM Changeset [930] by
- Fixed support for MatrixLookup? in NCC. See ticket:259
- 12:20 AM Changeset [929] by
- grammar
- 12:16 AM Ticket #264 (Score in InputRanker) created by
-
InputRanker? is taking a
Score&but every function in Score is const. …
Oct 3, 2007:
- 11:09 PM Ticket #263 (matrix and iterators) created by
- related to ticket:256 and ticket:267 I would like to have three types …
- 6:59 PM Changeset [928] by
- removing some includes not needed
- 6:58 PM Changeset [927] by
- modifying weighted euclidean
- 8:11 AM Changeset [926] by
- Fixing minor mistakes so things gets installed with make install
- 12:22 AM Ticket #262 (Add section on Distance in weighted statistics document) created by
Oct 2, 2007:
- 11:24 PM Ticket #199 (NNI should use Euclidean) closed by
- wontfix: NNI works fine. No reason to change it.
- 4:02 PM Changeset [925] by
- NCC and IGP have been changed to templates on Distance
- 11:47 AM Changeset [924] by
- See ticket:190
- 10:55 AM Ticket #190 (utility::vector and utility::matrix expects quiet_NaN is supported but ...) reopened by
- The AC check may pass but the quiet_NaN support is flaky in the …
Oct 1, 2007:
- 8:29 PM Changeset [923] by
- Changed references to CVS to refer to subversion. Moved FIXME items to …
- 8:24 PM Ticket #190 (utility::vector and utility::matrix expects quiet_NaN is supported but ...) closed by
- fixed: Fixed in changeset:922
- 8:22 PM Changeset [922] by
- Fixes #190. configure now checks for quite Nan. Check for this removed …
- 10:59 AM Ticket #261 (Implement yat_assert properly) created by
- The vanilla version provided by Peter do not work on Mac. Some more …
- 10:57 AM Changeset [921] by
- Removed undefined macro on MacOSX. Now the yat_assert compiles.
Sep 30, 2007:
- 4:38 AM Ticket #241 (Remove lost '>' on Doxygen first page) closed by
- fixed: fixed in [920]
- 4:38 AM Changeset [920] by
- fixes #241
- 3:38 AM Ticket #239 (to_lower and to_upper should return reference to passed string) closed by
- fixed: fixed in [919]
- 3:38 AM Changeset [919] by
- fixes #239
- 3:33 AM Ticket #257 (matrix does not accept "-inf") closed by
- fixed: fixed in [917] and [918]
- 3:32 AM Changeset [918] by
- modifing tests to fit new implementation
- 3:26 AM Changeset [917] by
- fixes #257
- 2:51 AM Ticket #260 (DataLookup2D should have a operator<<) closed by
- fixed: fixed in [916]
- 2:50 AM Changeset [916] by
- Sorry this commit is a bit to big. Adding a yat_assert. The yat …
Sep 29, 2007:
- 6:16 AM Ticket #260 (DataLookup2D should have a operator<<) created by
- 4:24 AM Ticket #246 (Averager classes should have interface for Iterators) closed by
- fixed: in [914] For now I leave these as free functions.
- 4:20 AM Changeset [915] by
- fixing dox
- 4:18 AM Changeset [914] by
- refactoring add function in Averagers, refs #246
- 2:58 AM Changeset [913] by
- remove stupid extra include that was added in last ci
- 2:53 AM Changeset [912] by
- Made add function for AveragerPair? no longer accept weighted …
- 2:41 AM Changeset [911] by
- Made add function for Averager no longer accept weighted iterators. …
- 2:20 AM Changeset [910] by
- impl add function for AveragerWeighted?. The function distinguishes …
- 1:50 AM Ticket #251 (weighted_random_access_iterator_tag) closed by
- fixed: In [909] using weighted_iterator_traits, closes #251
- 1:49 AM Changeset [909] by
- using weighted_iterator_traits, closes #151
- 1:09 AM Ticket #259 (KNN/NBC/NCC should support both MatrixLookup and MatrixLookupWeighted) created by
- Matrix-based classifiers such as KNN, NBC and NCC should support both …
- 12:26 AM Changeset [908] by
- adding IteratorWeighted?.h in Makefile.am (so file is included in …
Sep 28, 2007:
- 1:03 AM Changeset [907] by
- adding copyright
- 1:02 AM Changeset [906] by
- 1:00 AM Changeset [905] by
- Updating NEWS file and setting mime-type to text/x-trac-wiki
Sep 27, 2007:
- 11:40 PM Ticket #258 (Permutation test) created by
- I tend to write the same code over and over again […] Perhaps we …
- 10:12 PM Ticket #257 (matrix does not accept "-inf") created by
- Is that a restriction created by yat or is it inherited from GSL? If …
- 9:24 PM Ticket #256 (vector matrix view design - could it be improved?) created by
- related to ticket:267 I don't like the interface to views. For …
- 8:30 PM Changeset [904] by
- removing assert from header file
- 8:26 PM Changeset [903] by
- Forgot this test in the last check-in.
- 11:52 AM Ticket #255 (Our iterators should use the special std base class iterator<>) created by
- We are setting a bunch of typedefs first in Iterator (and …
- 11:01 AM Changeset [902] by
- Fixing mistake in last revision (forgot to add KNN.h)
- 11:00 AM Changeset [901] by
- Added a template KNN classifier where the distance measure is the …
- 9:10 AM Changeset [900] by
- Refs #251. Fixed so the unweighted distances are at the …
Sep 26, 2007:
- 11:27 PM Ticket #253 (weighted euclidean in euclidean_vector_distance.h has some weird properties) closed by
- fixed: fixed in [889]
- 11:26 PM Changeset [899] by
- changed euclidean to fulfill design criteria, removes …
- 11:17 PM Ticket #254 (Document distance, euclidean_distance, ...) created by
- 7:04 PM Ticket #251 (weighted_random_access_iterator_tag) reopened by
- I am not sure this discussion is finished. The problem is that if we …
- 6:31 PM Ticket #253 (weighted euclidean in euclidean_vector_distance.h has some weird properties) created by
-
It returns
sqrt(ap.sum_squared_deviation())that is sqrt (sum [w_x … - 6:01 PM Ticket #252 (value is not set properly in Iterator) created by
-
valueshould probably reflect the return_type. At time beingvalue… - 4:51 PM Ticket #251 (weighted_random_access_iterator_tag) closed by
- fixed: This is fine with me. Some comment though 1. Good. Writing code in …
- 3:44 PM Changeset [898] by
- A first suggestion for how to adress #250. Also removed contamination …
- 12:18 AM Ticket #251 (weighted_random_access_iterator_tag) created by
- This ticket relates to various issues of how we should design things …
Sep 25, 2007:
- 10:46 PM Changeset [897] by
- removing keyword that was mistakingly added before
- 10:43 PM Changeset [896] by
- …
- 10:39 PM Changeset [895] by
- Another try, hm…
- 10:25 PM Changeset [894] by
- setting missing property Id on files
- 9:32 PM Changeset [893] by
- Removing make check' output. Please obey the rule that tests are mute …
- 9:25 PM Changeset [892] by
- Fixed documentation of sum_squared_deviation
- 8:54 PM Ticket #247 (IteratorWeighted: Design and implementation) reopened by
-
I don't like
operator*returningdata*weight. I would rather see … - 4:26 PM Changeset [891] by
- Minor modifications
- 11:43 AM Ticket #250 (The new vector_distance structure should replace the old Distance ...) created by
- NCC, IGP and perhaps other things use the old Distance classes. They …
- 11:38 AM Ticket #247 (IteratorWeighted: Design and implementation) closed by
- fixed: In [890] this was implemented as utility::IteratorWeighted? with …
- 11:36 AM Ticket #245 (Distance should take Iterators) closed by
- fixed
- 11:35 AM Changeset [890] by
- Refs #245 #246 #247
- 9:33 AM Ticket #249 (Euclidean returns squared value) created by
- operator() in Euclidean calculates squared Euclidean distances. I …
- 9:30 AM Changeset [889] by
- Refs #245. A new structure to calculate distances between vectors that …
Sep 24, 2007:
- 10:42 PM Changeset [888] by
- fixing doxygen parsing
- 10:05 PM Ticket #248 (avoid using GSL sort algo in vector::sort) created by
- There is a bug in underlying GSL sort (I know GSL people call it a …
- 9:52 PM Changeset [887] by
- made add function template so it accepts AveragerWeighted? too. Also …
- 9:01 PM Changeset [886] by
- add function for Averager and AveragerPair? taking iterators refs #246
- 8:35 PM Ticket #247 (IteratorWeighted: Design and implementation) created by
- relates to Iterator (#244) needed for ticket:246 Questions: 1. …
Sep 23, 2007:
- 2:23 AM Changeset [885] by
- adding some cleaning
- 12:57 AM Ticket #244 (Iterators for 1D containers) closed by
- fixed: Fixed in [881] [882] [883] and [884]
- 12:53 AM Changeset [884] by
- some documentation
- 12:05 AM Changeset [883] by
- fixing problems with iterator -> const_iterator conversion
Sep 22, 2007:
- 10:28 PM Changeset [882] by
- fixing includes - sorry about that
- 10:22 PM Changeset [881] by
- merged constIterator into Iterator and added an extra template …
- 1:43 AM Changeset [880] by
- refs #244
Sep 21, 2007:
- 4:10 PM Changeset [879] by
- Added support to utility::vector for gsl-functions that finds indices …
- 12:36 AM Ticket #246 (Averager classes should have interface for Iterators) created by
- needs ticket:244 ticket:247 relates to ticket:245 More or less the …
- 12:35 AM Ticket #245 (Distance should take Iterators) created by
- needs ticket:244 Well, in fact it should not take Iterators, but be …
- 12:32 AM Ticket #244 (Iterators for 1D containers) created by
- relates to ticket:210 We need Iterators for our 1D containers. The …
Sep 20, 2007:
- 9:08 PM Changeset [878] by
- Problem with previous checkin fixed
- 9:01 PM Changeset [877] by
- This revision breaks the vector_test. I know this is against the rules …
Sep 19, 2007:
- 9:53 PM Changeset [876] by
- Added missing #include <cassert>
- 8:18 PM Ticket #243 (Unexpected version numbering of installed libraries) created by
-
Doing
ls -rtl /usr/local/libafter installation of yat 0.3.1 … - 8:12 PM Ticket #242 (Test data files get installed in /usr/local/share) created by
- Related to ticket:278 Installing yat also installs test data. In …
- 2:17 AM Changeset [875] by
- rewriting SW algo, making code clearer, and perhaps removing a few bugs...?
Sep 18, 2007:
- 2:54 PM Ticket #237 (NCC::predict is incorrect for weights (not equal zero or unity)) closed by
- fixed
- 2:53 PM Changeset [874] by
- Fixes ticket:237
- 3:25 AM Ticket #241 (Remove lost '>' on Doxygen first page) created by
- 3:14 AM Changeset [873] by
- fixing some docs
- 2:21 AM Changeset [872] by
- Some docs for TypeInfo?
- 12:41 AM Ticket #240 (CommandLine class) created by
- needed for ticket:217
Sep 17, 2007:
- 9:04 AM Ticket #233 (Links to documentation are broken) closed by
- fixed: Yes, this was fixed a few days ago on the wiki.
Sep 15, 2007:
- 1:48 AM Changeset [871] by
- minor docs fix
Sep 14, 2007:
- 9:14 PM Changeset [870] by
- After re-installing yat, the issue vanished, so here is the test for …
- 8:59 PM Changeset [869] by
- Adding Smith-Waterman local alignment and modified ssearch to use this …
- 6:52 PM Ticket #236 (Predictions using Ensemble with feature selection does not work properly) closed by
- fixed: ([868]) fixes ticket:236
- 6:51 PM Changeset [868] by
- fixes ticket:236
- 6:40 PM Ticket #238 (clone function in DataLookup2D returning pointer to new DataLookup2D ...) closed by
- invalid: Functionality, already exists. I don't change name of the function.
- 5:39 AM Ticket #239 (to_lower and to_upper should return reference to passed string) created by
- This simply allows suggestive code like […]
- 2:10 AM Ticket #238 (clone function in DataLookup2D returning pointer to new DataLookup2D ...) created by
- This is needed for ticket:236 (see discussion there) `virtual const …
Sep 13, 2007:
- 9:36 PM Changeset [867] by
- adding function doing a SSEARCH between two strings
- 9:04 PM Ticket #237 (NCC::predict is incorrect for weights (not equal zero or unity)) created by
- related to ticket:210 `void NCC::predict(const DataLookup2D& input, …
Sep 12, 2007:
- 10:18 PM WikiStart edited by
- Fixed broken link to the trunk documentation. (diff)
- 2:25 PM Changeset [866] by
- refs #236. EnsembleBuilder::predict bug fixed for matrix-based …
- 12:03 PM Ticket #236 (Predictions using Ensemble with feature selection does not work properly) created by
- EnsembleBuilder? does not use the features selected in predict. The …
Sep 10, 2007:
- 9:44 PM Ticket #232 (trac has moved - correct all links to this site) closed by
- fixed: fixed in [865]
- 9:41 PM Changeset [865] by
- changing URL to http://trac.thep.lu.se/trac/yat
- 4:38 PM Changeset [864] by
- Added a lot of tests to feature_selection_test
- 4:17 PM Changeset [863] by
- Fixed bug in FeatureSelectorIR that resulted in incorrect results!.
- 3:18 PM Changeset [862] by
- Fixed bug in InputRanker? that sometimes gave rise to a bus error …
Sep 8, 2007:
Sep 7, 2007:
- 10:37 PM Changeset [861] by
- adding class to store and compare std::type_info
- 9:39 PM Ticket #149 (Target constructor from Target and vector<string>) closed by
- fixed: fixed in [860]
- 9:39 PM Changeset [860] by
- fixes #149 - Target constructor from Target and vector<string>
- 1:37 AM Ticket #148 (use pointer dynamic_cast when failure is ecpected) closed by
- fixed: fixed in [857] and [858]
- 1:36 AM Changeset [859] by
- updated copyright
- 1:32 AM Changeset [858] by
- refs #148 in EnsembleBuilder?
- 1:23 AM Changeset [857] by
- refs #148 in NCC
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