Timeline



Mar 8, 2008:

12:58 AM ReleaseProcedure edited by Peter
(diff)
12:39 AM Changeset [1216] by Peter
adding support for MAJOR MINOR PATCH

Mar 7, 2008:

8:45 PM Ticket #224 (Test Suite Class) closed by Peter
fixed
8:44 PM Changeset [1215] by Peter
refs #223 and fixes #224
8:40 PM Changeset [1214] by Peter
see r1213
1:40 PM Changeset [1213] by Peter
remove extra '-g -O2' expansion of CXXFLAGS in AC_PROG_CXX
5:00 AM Changeset [1212] by Peter
removing redundant test

Mar 6, 2008:

8:51 PM Changeset [1211] by Peter
minor changes
5:00 PM Changeset [1210] by Peter
refs #223 change fabs to std::abs
3:28 AM Ticket #331 (differentiate "make doc") closed by Peter
fixed
1:32 AM Changeset [1209] by Peter
fixes #331
1:00 AM Changeset [1208] by Peter
leftover from stone age
12:56 AM Ticket #282 (check for 'd' in FileUtil::permission) closed by Peter
fixed
12:56 AM Changeset [1207] by Peter
fixes #282

Mar 5, 2008:

6:56 PM Ticket #345 (EnsembleBuilder::predict does not work) closed by Peter
fixed: fixed in [1206]
6:56 PM Changeset [1206] by Peter
fixes #345
3:48 PM Ticket #75 (Doxygen document SupervisedClassifier) closed by Peter
fixed
3:48 PM Changeset [1205] by Peter
fixes #75
3:47 PM Ticket #345 (EnsembleBuilder::predict does not work) created by Peter
The test for EnsembleBuilder? are not sufficient. We have to test all …
3:26 PM Changeset [1204] by Peter
Return by value from FeatureSelector?. Copying a Lookup is cheap, so no …
3:05 PM Changeset [1203] by Peter
docs improvements in Histogram
3:04 PM Changeset [1202] by Peter
reversing sort order in KS
3:56 AM Changeset [1201] by Peter
returning SmartPtr? rather than conventional pointer when object is …
3:30 AM Changeset [1200] by Peter
working on #75

Mar 4, 2008:

6:57 PM WikiStart edited by Peter
(diff)
12:12 AM Changeset [1199] by Peter
cosmetic change
12:04 AM Changeset [1198] by Peter
fixed bug in KolmogorovSmirnov::score

Mar 3, 2008:

3:32 PM Changeset [1197] by Peter
docs

Feb 29, 2008:

11:07 PM Changeset [1196] by Peter
fixed bug in Vector when copying empty Vector
10:50 PM Changeset [1195] by Peter
fixed bug in convert function
9:24 PM Changeset [1194] by Peter
minor correction
8:48 PM Changeset [1193] by Peter
changing operator() in weighted lookups and removing operator[] in 1D …
8:09 PM Changeset [1192] by Peter
some more docs
7:57 PM Changeset [1191] by Peter
improved docs for MatrixLookup?
7:17 PM Changeset [1190] by Peter
adding missing implementation of operator += and added some throwing
3:49 PM DownloadPage edited by Peter
Made download links relative (diff)
12:58 PM Changeset [1189] by Markus Ringnér
NCC fixed for #75
11:14 AM Changeset [1188] by Markus Ringnér
Fixed KNN and SupervisedClassfier? for #75

Feb 28, 2008:

10:06 PM Changeset [1187] by Peter
minor docs issues fixed
10:00 PM Changeset [1186] by Peter
minor docs issues fixed
9:15 PM Changeset [1185] by Peter
corrected links to Weighted Statistics docs
9:09 PM Ticket #286 (documentation on vector and matrix functions) closed by Peter
invalid: I checked the GSL code, and it is indeed copy element by element in a loop.
8:13 PM Ticket #335 (training on empty classes in NCC/KNN/NBC) closed by Peter
fixed: (in [1184]) Fixed NBC predict. Implementation of weighted test data …
7:49 PM Changeset [1184] by Peter
refs #335 predict fixed for NBC
5:53 PM Changeset [1183] by Peter
changed regression test to be less strict. test failed after I started …
2:58 PM Ticket #332 (configure does not find my ATLAS) closed by Peter
wontfix: Ok, then we close it.
1:27 PM Changeset [1182] by Peter
working on #335. Fixed weighted test data case. Left to fix is when …

Feb 27, 2008:

10:32 PM Ticket #262 (Add section on Distance in weighted statistics document) closed by Peter
fixed
10:31 PM Changeset [1181] by Peter
fixes #262
9:50 PM Changeset [1180] by Jari Häkkinen
Fixed atlas information.
8:31 PM Changeset [1179] by Peter
remove debug code
8:24 PM Ticket #344 (Commandline::parse should throw cmd_error) closed by Peter
fixed
8:24 PM Changeset [1178] by Peter
fixes #344
7:02 PM Ticket #344 (Commandline::parse should throw cmd_error) created by Peter
Error caused by some error in commandline shoudl throw cmd_error …
6:03 PM Changeset [1177] by Peter
minor fix - see [1175]
5:58 PM Changeset [1176] by Markus Ringnér
Working on #75
5:27 PM Changeset [1175] by Peter
fixed bug in SVM. SVM does not own the Kernel and should therefore …
5:14 PM Ticket #130 (KernelLookups and MatrixLookups not in inheritance structure but template) closed by Markus Ringnér
fixed: Fixed in [1170]
4:58 PM Changeset [1174] by Peter
removing copy not needed
4:19 PM Changeset [1173] by Markus Ringnér
Minor fixes
3:32 PM Changeset [1172] by Peter
allowing resize to zero size. In Matrix if resize is called with only …
1:55 PM Changeset [1171] by Peter
minor addition
1:11 AM Ticket #343 (remove DataLookup2D) closed by Peter
fixed
1:06 AM Changeset [1170] by Peter
removing DataLookup2D closes ticket:243

Feb 26, 2008:

11:09 PM Changeset [1169] by Peter
refs #343 moving data to inherited classes and using SmartPtr?.
9:49 PM Ticket #342 (remove training_data() etc from interface of Lookups) closed by Peter
fixed
9:48 PM Changeset [1168] by Peter
fixes #342
9:04 PM Ticket #343 (remove DataLookup2D) created by Peter
It is not used anywhere, so why not remove it…
9:02 PM Changeset [1167] by Peter
refs #342 in KernelLookup? and DataLookup2D - nothing changed in …
8:17 PM Changeset [1166] by Markus Ringnér
typos
8:11 PM Ticket #287 (avoid using dynamic_cast in Subset and SupervisedClassifer) closed by Peter
fixed: List of daughter tickets will not be extended.
8:06 PM Changeset [1165] by Peter
removed dynamic_casts
7:59 PM Ticket #318 (SupervisedClassifier::train take data and target) closed by Peter
fixed: Agree
7:36 PM Changeset [1164] by Markus Ringnér
Refs. #318
6:15 PM Changeset [1163] by Peter
replacing DataLookup2D* data_ in Kernel with a MatrixLookup?*. The …
5:25 PM Ticket #340 (slim down SupervisedClassifer) closed by Peter
fixed: in [1162] removed variable bool trained_. It was not used anywhere.
5:24 PM Changeset [1162] by Peter
removing trained_
4:47 PM Changeset [1161] by Peter
testing to build ensemble of svm refs #318
4:30 PM Ticket #333 (Remove DataLookup2D in SupervisedClassifier interface) closed by Markus Ringnér
fixed: Fixed in [1160]
4:29 PM Changeset [1160] by Markus Ringnér
Fixes #333
4:12 PM Changeset [1159] by Peter
typo
4:02 PM Ticket #342 (remove training_data() etc from interface of Lookups) created by Peter
Lookups have a lot of functions that were motivated when we tried to …
3:02 PM Ticket #341 (Document SubsetGenerator and EnsembleBuilder) created by Markus Ringnér
Both SubsetGenerator and EnsembleBuilder use a template argument …
2:51 PM Ticket #322 (Classes templatized on Distance should take Distance in constructor) closed by Markus Ringnér
fixed: Fixed in [1158] (ticket:318 was fixed enough for this in [1157])
2:49 PM Changeset [1158] by Markus Ringnér
Fixed #322
2:25 PM Changeset [1157] by Markus Ringnér
Refs #318
9:46 AM Changeset [1156] by Markus Ringnér
Refs. #335, fixed for KNN
9:46 AM Changeset [1155] by Markus Ringnér
Refs. #335, fixed for KNN
6:18 AM Changeset [1154] by Peter
some docs on weighted distance…
3:01 AM Changeset [1153] by Peter
Removing text not being true anymore
12:31 AM Changeset [1152] by Peter
some docs for NBC, note docs that not yet match implementation refs #335
12:16 AM Ticket #340 (slim down SupervisedClassifer) created by Peter
It should have no member variables, i.e. move Target and Data to …

Feb 25, 2008:

11:32 PM Changeset [1151] by Peter
remove operator [] in Vector.
11:27 PM Changeset [1150] by Peter
allow doxygen tag internal that creates text 'FOR INTERNAL USE ONLY'
10:44 PM Changeset [1149] by Peter
remove obsolete empty paragraphs
10:39 PM Ticket #338 (configure warning about missing latex could be improved when Doxygen ...) closed by Peter
fixed: in [1148]
10:36 PM Changeset [1148] by Peter
fixes #338
10:28 PM Ticket #294 (istream constructors try to create zero size gsl vector/matrix.) closed by Peter
fixed: in [1147]
10:24 PM Changeset [1147] by Peter
fixes #294
10:04 PM Ticket #327 (test that matrix::row_view(i).begin() == matrix::begin_row(i)) closed by Peter
fixed: DataLookup? modified in [1146]
10:03 PM Changeset [1146] by Peter
DataLookup1D is now a lookup into a MatrixLookup? closes #327
9:24 PM Ticket #292 (Interface of PearsonCorrelation does not support iterators) closed by Peter
fixed: fixed in [1145] Placed the function in statistics/utility.
9:23 PM Changeset [1145] by Peter
fixes #292
5:52 PM Ticket #334 (return Derived* from make_classifier not SupervisedClassifier) closed by Markus Ringnér
fixed
5:51 PM Changeset [1144] by Markus Ringnér
Fixes #334
3:43 PM Changeset [1143] by Markus Ringnér
Additional test added for #335
3:32 PM Changeset [1142] by Markus Ringnér
Refs #335, fixed for NCC, working on KNN
2:22 PM Changeset [1141] by Peter
adding iterator to ROC interface - refs #292

Feb 24, 2008:

8:58 PM Changeset [1140] by Peter
leftover
2:59 AM Changeset [1139] by Peter
iterators in PearsonCorrelation? interface
2:15 AM Changeset [1138] by Peter
refs #327 for DataLookupWeighted1D
1:51 AM Changeset [1137] by Peter
refs #327 for utility::matrix
12:46 AM Changeset [1136] by Peter
avoid reallocation when sizes match in Vector assignment
12:41 AM Ticket #339 (Vector: indirect self-assignment)) closed by Peter
fixed: fixed in [1135]
12:40 AM Changeset [1135] by Peter
fixes self assignment in Vector - fixes #339

Feb 23, 2008:

11:53 PM Ticket #317 (Use classes Index in DataLookup2D) closed by Peter
fixed: in [1134]
11:53 PM Ticket #234 (KernelLookup should not be inherited from DataLookup2D) closed by Peter
fixed
11:52 PM Changeset [1134] by Peter
using Index class instead of std::vector<size_t>
9:40 PM Changeset [1133] by Peter
using SmartPtr? in KernelLookup? rather than doing the ref count myself
9:16 PM Changeset [1132] by Peter
KernelLookup? is not inherited from DataLookup2D - fixes #234
7:50 PM Ticket #256 (vector matrix view design - could it be improved?) closed by Peter
fixed
7:50 PM Changeset [1131] by Peter
adding test for VectorConstView? independance
7:49 PM Changeset [1130] by Peter
some docs and fixed bug in VectorConstView?
7:05 PM Changeset [1129] by Peter
some docs refs #256
5:46 PM Ticket #339 (Vector: indirect self-assignment)) created by Peter
How should vector behave in assignment in which rhs is a view into …
4:48 PM Ticket #338 (configure warning about missing latex could be improved when Doxygen ...) created by Peter
I get following warning […] What do you think about the second …
11:03 AM Changeset [1128] by Jari Häkkinen
Addresses #308. Stray matrix -> Matrix.

Feb 22, 2008:

11:46 PM Changeset [1127] by Peter
undoing [1126] which did not compile. forgot to run make check. sorry …
11:31 PM Changeset [1126] by Peter
working on ticket:234
10:31 PM Changeset [1125] by Peter
fixing Doxygen parsing
7:48 PM Changeset [1124] by Peter
train returns nothing, removed docs saying else
6:11 PM Changeset [1123] by Peter
corrected docs to better reflect reality
6:01 PM Changeset [1122] by Peter
refs #335 - Changed so Averager classes are consistently returning NaN …
4:30 PM Ticket #308 (Change name of utility::matrix to utility::Matrix) closed by Peter
fixed: fixed in [1121]
4:29 PM Changeset [1121] by Peter
fixes #308
12:19 AM Ticket #307 (Change name of utility::vector to utility::Vector) closed by Peter
fixed: fixed in [1120]
12:18 AM Changeset [1120] by Peter
vector is now Vector

Feb 21, 2008:

11:27 PM Changeset [1119] by Peter
add view_test into TESTS
11:09 PM Ticket #305 (matrix_test and score_test fail on linux) closed by Peter
fixed: in [1118]
11:08 PM Changeset [1118] by Peter
fixing memory bug in VectorView? - fixes #305
8:57 PM Changeset [1117] by Peter
view_test is now builf from 'make check' but not included in check
8:51 PM Changeset [1116] by Peter
8:34 PM trac_usage edited by Markus Ringnér
(diff)
8:21 PM Ticket #295 (Document Distance in NCC/KNN) closed by Markus Ringnér
fixed
8:21 PM Ticket #254 (Document distance, euclidean_distance, ...) closed by Markus Ringnér
fixed
8:20 PM Changeset [1115] by Markus Ringnér
Fixes #254 and #295
7:30 PM Changeset [1114] by Peter
adding test program for view provided from Markus.
6:43 PM Ticket #182 (Implement Nearest Neighbour Classifier) closed by Markus Ringnér
fixed: This ticket has been fixed in KNN.h with [1112]. Leftovers: * How …
5:49 PM Changeset [1113] by Peter
typo - right?
3:59 PM Changeset [1112] by Markus Ringnér
Mostly related to #295 and #182

Feb 20, 2008:

6:57 PM Ticket #337 (log and exp functors) created by Peter
in line with std::plus with the difference that these functors are …
6:26 PM Ticket #321 (Comparison of Iterators) closed by Peter
fixed: The example in description is no longer an issue. …
5:32 PM Ticket #336 (avoid including installed yat) created by Peter
Related to ticket:347 and ticket:355 It has happened a couple of …
5:11 PM Changeset [1111] by Markus Ringnér
Peters last revision did not compile. Fixed here

Feb 19, 2008:

11:05 PM Ticket #252 (value is not set properly in Iterator) closed by Peter
fixed
11:03 PM Changeset [1110] by Peter
changing name of Iterator and some left-over from prev commit
10:36 PM Ticket #325 (rewrite weighted statistics class in doxygen format) closed by Peter
fixed
10:35 PM Changeset [1109] by Peter
fixes #325
9:32 PM Ticket #335 (training on empty classes in NCC/KNN/NBC) created by Peter
Unweighted training in NCC assumes that every class is represented in …
6:40 PM Changeset [1108] by Peter
adding svm copy constructor
5:46 PM Ticket #334 (return Derived* from make_classifier not SupervisedClassifier) created by Peter
needs ticket:318 The SupervisedClassifier? interface requires …
5:29 PM Ticket #333 (Remove DataLookup2D in SupervisedClassifier interface) created by Peter
daughter of ticket:287 relates to ticket:218 Mainly this involves …
5:11 PM Ticket #259 (KNN/NBC/NCC should support both MatrixLookup and MatrixLookupWeighted) closed by Markus Ringnér
fixed
4:23 PM Changeset [1107] by Markus Ringnér
Ticket #259 fixed for KNN
4:01 PM Ticket #332 (configure does not find my ATLAS) created by Peter
I am using Fedora 7 and have ATLAS installed in /usr/lib/atlas/. …
5:29 AM Ticket #316 (Create an Index class) closed by Peter
fixed
5:28 AM Changeset [1106] by Peter
Fixes #316 - Index class

Feb 18, 2008:

6:27 AM Changeset [1105] by Peter
adding iterator typedefs in Lookups
6:14 AM Changeset [1104] by Peter
adding iterator typedefs in MatrixLookup?
6:07 AM Changeset [1103] by Peter
adding iterator typedefs in matrix
6:01 AM Ticket #314 (SVM::predict should not work on DataLookup2D) closed by Peter
fixed: in [1102]
6:00 AM Changeset [1102] by Peter
fixes #314
5:43 AM Changeset [1101] by Peter
reorder functions in vector.cc
5:41 AM Ticket #313 (SVM constructor should be void) closed by Peter
fixed: in [1100]
5:37 AM Changeset [1100] by Peter
fixes #313 - SVM constructor is void and passing kernel and target in …
4:42 AM Changeset [1099] by Jari Häkkinen
Readded resize() to vector.
4:14 AM Ticket #299 (redesign of matrix class) closed by Jari Häkkinen
fixed: Fixed in changeset:1098
4:13 AM Changeset [1098] by Jari Häkkinen
Fixes #299. Memory leak in matrix was found and removed.

Feb 17, 2008:

11:43 PM Ticket #243 (Unexpected version numbering of installed libraries) closed by Jari Häkkinen
fixed: changeset:1097 fixes this. ReleaseProcedure was also changed.
11:41 PM Changeset [1097] by Jari Häkkinen
Fixes #243. ReleaseProcedures? was also changed.
11:31 PM ReleaseProcedure edited by Jari Häkkinen
(diff)
11:01 PM ReleaseProcedure edited by Jari Häkkinen
(diff)
7:36 PM Changeset [1096] by Jari Häkkinen
Avoid resetting compiler/linker flags.
7:31 PM Changeset [1095] by Jari Häkkinen
Removed obsolete #include statement

Feb 15, 2008:

7:08 PM Ticket #331 (differentiate "make doc") created by Peter
related to ticket:273 I would like to have that make html produces …
3:39 PM Changeset [1094] by Peter
adding copyright and svn:prop

Feb 14, 2008:

11:08 PM Changeset [1093] by Peter
some doc for EuclideanDistance? refs #254
10:54 PM Ticket #329 (rename struct weighted_type to weighted_tag) closed by Peter
fixed: in 1092
10:54 PM Changeset [1092] by Peter
fixes #329 rename weighted_type to weighted_iterator_tag
8:11 PM Ticket #330 (use convert in istream constructor for Vector a Matrix) created by Peter
Constructing matrix/vector from stream involves checking if string is …
5:28 PM Ticket #267 (iterator for 2D Lookups) closed by Peter
fixed: iterator for MatrixLookupWeighted? in [1091] and [1090]
5:26 PM Changeset [1091] by Peter
fixes #267 iterator for MatrixLookupWeighted?
4:22 PM Changeset [1090] by Peter
adding const_iterator typedef for MatrixLookupWeighted? refs #267
3:37 PM Ticket #247 (IteratorWeighted: Design and implementation) closed by Peter
fixed: IteratorWeighted? is removed. Functionality instead using Iterator with …
3:37 PM Changeset [1089] by Peter
removing IteartorWeighted?
3:33 PM Ticket #255 (Our iterators should use the special std base class iterator<>) closed by Peter
fixed
3:26 PM Changeset [1088] by Peter
Closes #247. Removed IteratorWeighted? iterators over weighted …
7:06 AM Ticket #312 (SVM should not inherit from SupervisedClassifer) closed by Peter
fixed: in [1087]
7:05 AM Changeset [1087] by Peter
fixes #312 and added passing of data in EB constructors
6:43 AM Ticket #310 (remove DataLookup2D from SubsetGenerator) closed by Peter
fixed: in [1086]
6:43 AM Changeset [1086] by Peter
fixes #310

Feb 13, 2008:

9:24 PM Changeset [1085] by Peter
docs
8:28 PM Changeset [1084] by Markus Ringnér
Adding tests
8:03 PM Ticket #329 (rename struct weighted_type to weighted_tag) created by Peter
likewise replace unweighted_type with unweighted_tag It is more …
2:13 PM Changeset [1083] by Peter
working on #247
1:50 PM Changeset [1082] by Peter
working on #247
12:54 PM Changeset [1081] by Peter
added IteratorPolicy?.h in Makefile.am
12:49 PM Changeset [1080] by Peter
refs #247, #252, and #267
12:45 PM Ticket #311 (templatize EnsembleBuilder) closed by Peter
fixed: in r1079
12:44 PM Changeset [1079] by Peter
fixes #311

Feb 12, 2008:

11:33 PM Ticket #328 (Ticket for testing svn post-commit hook) created by Jari Häkkinen
I had to add this ticket for testing. The 'trash' project does not …
10:47 PM Ticket #118 (Overhaul of configure.ac) closed by Jari Häkkinen
fixed
10:45 PM Changeset [1078] by Jari Häkkinen
Fixes #118. Removed reset of CXXFLAGS from configure.ac and added info …
9:44 PM Ticket #280 (when GSL or other needed things are not found configure should fail) closed by Jari Häkkinen
fixed
9:43 PM Ticket #319 (link to Doxygen documentation trunk version is broken) closed by Jari Häkkinen
fixed: There was many problems with the new trac host. Many outdated packages …
8:44 PM Changeset [1077] by Jari Häkkinen
Added check for existence of sed, needed to set variable SED used in …
8:15 PM Ticket #327 (test that matrix::row_view(i).begin() == matrix::begin_row(i)) created by Peter
and siblings in column versions, const versions, and Lookup versions.
2:51 PM Changeset [1076] by Markus Ringnér
NCC done for ticket:259
1:55 PM Changeset [1075] by Markus Ringnér
Fixed bug in test
12:35 PM Ticket #323 (Where should we document concepts?) closed by Markus Ringnér
fixed: Now I think all the issues in the list above has been resolved. To …
11:20 AM Changeset [1074] by Markus Ringnér
Fixed so Concepts becomes a separet page with different concepts as …
10:56 AM Changeset [1073] by Markus Ringnér
Working on ticket:323
1:24 AM Ticket #309 (templatize SubsetGenerator part I) closed by Peter
fixed: in [1072]
1:22 AM Changeset [1072] by Peter
fixes #309

Feb 11, 2008:

11:31 PM Changeset [1071] by Markus Ringnér
Minor documentation fix
10:58 PM Changeset [1070] by Markus Ringnér
Fixing typo
10:57 PM Changeset [1069] by Markus Ringnér
First few steps on #323
8:29 PM Changeset [1068] by Peter
some documentation and vector::operator=(const VectorBase?&)
12:09 AM Changeset [1067] by Peter
using std::iterator in Iterator

Feb 10, 2008:

11:48 PM Changeset [1066] by Peter
Iterators for KernelLookup? - refs #267
11:24 PM Changeset [1065] by Peter
some documentation on matrix
11:07 PM Ticket #306 (Iterators for utility::matrix) closed by Peter
fixed: in [1064]
11:06 PM Changeset [1064] by Peter
fixes #306 matrix iterators
10:33 PM Changeset [1063] by Peter
Iterators for MatrixLookup?
7:41 PM Changeset [1062] by Peter
redesigning Iterator class to hold a 2D container rather than 1D as …

Feb 8, 2008:

11:57 PM Changeset [1061] by Jari Häkkinen
Addresses #208
11:51 PM Changeset [1060] by Jari Häkkinen
Fixes #280
11:50 PM Changeset [1059] by Jari Häkkinen
Addresses #208. Write requirements
11:48 PM Ticket #326 (yat m4 macro) closed by Jari Häkkinen
duplicate: Duplicate ticket:283
10:26 PM Changeset [1058] by Peter
some dox on vector - refs #256
8:11 PM Ticket #326 (yat m4 macro) created by Peter
When using yat and autotools it a bit difficult to do all the checks. …
7:47 PM Ticket #325 (rewrite weighted statistics class in doxygen format) created by Peter
relates to ticket:323 It would be nice to have this info included in …
7:38 PM Ticket #324 (meta-function taking (un)weighted_type and return Averager (or ...) created by Peter
The same for AveragerPair. This will useful in templates using …
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