Timeline



May 30, 2008:

2:48 AM Changeset [1331] by Peter
oops mistake in previous commit
2:33 AM Changeset [1330] by Peter
update LT_VERSION (a++) since implementation (in FileUtil?) was …
2:02 AM Ticket #378 (FileUtil::exists() fails on large files) created by Peter
Calling FileUtil::exists() on a large (37Gb) file results in […] …
12:55 AM Changeset [1329] by Peter
Fixed bug with errno. errno is int and taking string+int is not healthy.

May 29, 2008:

10:46 PM Ticket #377 (class for nucleotides) created by Peter
I need some utilities for dealing with sequences of nucleotides both …
10:12 PM Ticket #376 (configure reports flag info that may be misleading) created by Peter
In end of confiugure.ac we have these lines […] giving a summary …
4:46 PM Ticket #375 (send dogygen error message to a file) created by Peter
related to ticket:374 and ticket:162 Currently the error message is …
11:09 AM Ticket #233 (Links to documentation are broken) closed by Jari Häkkinen
fixed: Fixed, the trunk docs are not up to date.
10:58 AM Ticket #374 (Make documentation cron job report failures through email to maintainer.) created by Jari Häkkinen
related to ticket:375

May 28, 2008:

6:55 PM Ticket #233 (Links to documentation are broken) reopened by Peter
Link to trunk docs is broken again.

May 27, 2008:

5:50 PM Ticket #373 (Paramaterize how to calculate the average in Quantile Normalization) created by Peter

May 24, 2008:

7:47 PM Ticket #372 (version.h is not found by doxygen (when using VPATH)) created by Peter
Doxygen only look for src in $(top_srsdir)/yat. However, version.h
8:07 AM Changeset [1328] by Peter
added missing docs
7:53 AM Ticket #352 (modify FLAGS when configure option --with-gsl-prefix) closed by Peter
fixed: fixed in [1327]
7:53 AM Changeset [1327] by Peter
fixes #352
6:12 AM Changeset [1326] by Peter
correcting Id keyword
6:07 AM Changeset [1325] by Peter
adding info on boost
6:03 AM Ticket #370 (using boost) closed by Peter
fixed: As of r1324 yat requires Boost
6:00 AM Changeset [1324] by Peter
Boost is now required (ticket:370). Boost 1.33 is required, which is a …
2:25 AM Changeset [1323] by Peter
change template name to RandomAccessIterator? to clarify that …

May 23, 2008:

5:54 PM Changeset [1322] by Peter
corrected docs
4:21 PM Ticket #371 (remove ax_prefix_config_h.m4) created by Peter
It was introduced in r1319 and should in principle have been removed …
4:14 PM Changeset [1321] by Peter
Basically reverting r1319. I was not happy with the macro, so create …

May 22, 2008:

9:03 PM Changeset [1320] by Peter
vector -> Vector in docs
4:37 PM Ticket #370 (using boost) created by Peter
Working on ticket:369 I realize that implementing an iterator is …

May 21, 2008:

6:06 PM Ticket #355 (installation of config.h is flawed) closed by Peter
fixed: (in [1319]) config.h is no longer installed. Therefore, do not include …
6:03 PM Changeset [1319] by Peter
config.h is no longer installed. Therefore, do not include config.h …
5:25 PM Changeset [1318] by Peter
fixed compilation error
2:23 PM Changeset [1317] by Peter
moving implementation of percentile to a functor: Percentiler

May 20, 2008:

9:49 PM Changeset [1316] by Peter
removed include
6:32 AM Ticket #369 (create unweighted iterator from weighted iterator) created by Peter
needed for ticket:366 related to ticket:368 and ticket:391 A …
6:14 AM Ticket #368 (create weighted iterator from two unweighted iterators) created by Peter
related to ticket:369 Implement a weighted iterator that holds two …
1:03 AM Ticket #367 (preprocessor guards for deprecated functions) created by Peter
I would like to have preprocessor guards to surround deprecated …

May 19, 2008:

11:36 PM Changeset [1315] by Peter
fixed some docs and bugs for the unweighted operator refs #20
11:07 PM Ticket #189 (There are output to cerr in some library classes. Should these throw ...) closed by Peter
fixed: I'll remove the warnings when implementing the function. I have moved …
7:47 PM Ticket #330 (use convert in istream constructor for Vector a Matrix) closed by Peter
fixed: fixed in [1313] and [1314]
7:45 PM Changeset [1314] by Peter
closes #330
7:44 PM Changeset [1313] by Peter
refs #330 for Matrix
6:31 PM Ticket #360 (template function to check if a string is convertable to a specific ...) closed by Peter
fixed: fixed in [1312]
6:30 PM Changeset [1312] by Peter
closes ticket:360 a template function to check if a string is of type …
4:30 PM Ticket #180 (test CommandLine) closed by Peter
fixed
3:47 PM Ticket #324 (meta-function taking (un)weighted_type and return Averager (or ...) closed by Peter
fixed

May 18, 2008:

10:31 PM WikiStart edited by Jari Häkkinen
The change in http://trac.thep.lu.se/yat/wiki/WikiStart?version=32 … (diff)

May 17, 2008:

5:42 AM Ticket #359 (Smooth histogram) closed by Peter
fixed

May 16, 2008:

3:58 PM Changeset [1311] by Peter
fixed missing documentation
10:54 AM WikiStart edited by Jari Häkkinen
(diff)

May 15, 2008:

9:12 PM Changeset [1310] by Peter
closes #359
8:13 PM Ticket #290 (Histogram output operator) closed by Peter
invalid: output operator gives you middle of bin
7:18 PM Changeset [1309] by Peter
corrected link to yat 0.3 milestone
6:09 PM Changeset [1308] by Peter
added and corrected some docs
12:54 PM ReleaseProcedure edited by Peter
(diff)
12:49 PM Changeset [1307] by Peter
reversing incorrect merge
12:44 AM Changeset [1306] by Peter
adding a similar AveragerPair? traits and using it in PearsonDistance?
12:25 AM Changeset [1305] by Peter
Adding a functor that calculate average of a range. Also added a …

May 14, 2008:

10:23 PM Ticket #366 (specialize percentile (and thereby median indirectly) for weighted ...) created by Peter
need ticket:369 Not really needed now since we have no weighted …
10:14 PM Ticket #288 (Quantile Normalization) closed by Peter
fixed: fixed in [1304]
10:11 PM Changeset [1304] by Peter
quantile normalization closes #288
9:25 PM ReleaseProcedure edited by Peter
(diff)
6:17 PM ReleaseProcedure edited by Peter
(diff)
6:13 PM DownloadPage edited by Peter
(diff)
6:11 PM Milestone yat 0.4.1 completed
Bug fix release. Revision Log log:branches/0.4-stable@1279:1300
6:06 PM Changeset [1303] by Peter
Merged patch release 0.4.1 to the trunk. Delta 0.4.1 - 0.4
5:57 PM Changeset [1302] by Peter
Changes for future release 0.4.2
5:51 PM WikiStart edited by Peter
(diff)
5:50 PM DownloadPage edited by Peter
(diff)
5:47 PM yat-0.4.1.tar.gz.MD5 attached to DownloadPage by Peter
5:44 PM Changeset [1301] by Peter
Tagging version 0.4.1
5:42 PM yat-0.4.1.tar.gz attached to DownloadPage by Peter
5:31 PM Changeset [1300] by Peter
updating copyright statements
5:24 PM Changeset [1299] by Peter
Preparing for release 0.4.1

May 13, 2008:

7:57 PM Ticket #365 (files doc/*.doxygen are not included in distribution) closed by Peter
fixed: fixed in [1298]
7:57 PM Changeset [1298] by Peter
fixes #365
4:21 PM Ticket #361 (Averager class does not support removal of data) closed by Jari Häkkinen
fixed: changeset:1297 resolves the assert() issue.
4:20 PM Changeset [1297] by Jari Häkkinen
Fixes #361. Removed tests negative count n in averager.
3:40 PM Changeset [1296] by Jari Häkkinen
Removed stray unsigned from output string
2:47 PM Ticket #365 (files doc/*.doxygen are not included in distribution) created by Peter
2:21 PM Ticket #364 (Histogram cumulative distribution) created by Peter
related to ticket:290 I use the Histogram class to collect an …
12:16 AM Ticket #363 (Weighted Mutable Matrix) created by Peter
I think this is a missing feature. One could of course deal with …

May 12, 2008:

7:06 PM Ticket #361 (Averager class does not support removal of data) reopened by Peter
./averager_test -v results in […]
10:35 AM Ticket #361 (Averager class does not support removal of data) closed by Jari Häkkinen
fixed: changest:1295 resolves this ticket.
10:35 AM Changeset [1295] by Jari Häkkinen
Fixes #361. Averager and AveragerPair? accepts negative n for data removal.
10:21 AM Changeset [1294] by Jari Häkkinen
Reverting changes that break the interface of Averager and …
10:12 AM Ticket #361 (Averager class does not support removal of data) reopened by Jari Häkkinen
This change breaks rules for interface changes in a stable branch, …
2:04 AM Changeset [1293] by Peter
adding missing include

May 11, 2008:

6:07 PM Ticket #362 (run-time version check function) closed by Peter
fixed: fixed in [1292]
4:53 PM Changeset [1292] by Peter
fixes #362 - functions returning rumtime version numbers

May 10, 2008:

3:42 PM Ticket #362 (run-time version check function) created by Peter
Currently it is possible to check the version of headers through …

May 9, 2008:

9:44 PM Ticket #361 (Averager class does not support removal of data) closed by Jari Häkkinen
fixed: changeset:1291: AveragerPair accepts negative n for removal of data.
9:42 PM Changeset [1291] by Jari Häkkinen
Fixes #361
1:44 PM Changeset [1290] by Jari Häkkinen
Addresses #361. Averager accepts negative n for removal of data from …
11:56 AM Ticket #361 (Averager class does not support removal of data) created by Jari Häkkinen
The 'weight' for Averager::add is an unsigned long and there is no …

May 6, 2008:

11:30 PM Ticket #360 (template function to check if a string is convertable to a specific ...) created by Peter
Currently, there are function is_int, is_double and is_float. It …

Apr 30, 2008:

11:03 PM Ticket #359 (Smooth histogram) created by Peter
This algorithm can be viewed as an extension of a Histogram, and like …
3:27 PM Ticket #358 (add iterators in Kernel class) created by Peter
No reason not to have iterators here. I think Kernel class in …
Note: See TracTimeline for information about the timeline view.