Timeline



Jun 25, 2008:

12:22 AM Ticket #388 (use fifth argument [action-if-cross-compiling] in AC_RUN_IF_ELSE) closed by Peter
fixed: fixed in [1358]
12:21 AM Changeset [1358] by Peter
fixes #338 - runtime tests for quiet_NaN and infinity are not …

Jun 24, 2008:

10:43 PM Changeset [1357] by Peter
adding missing props
3:42 PM Ticket #388 (use fifth argument [action-if-cross-compiling] in AC_RUN_IF_ELSE) created by Peter
We use macro AC_RUN_IF_ELSE twice in configure.ac to test for …
1:20 AM Ticket #353 (create yat-config script) closed by Peter
fixed: (In [1356]) fixed a yat.pc file
1:19 AM Changeset [1356] by Peter
fixes #533 - added creation and installation of a yat.pc file

Jun 23, 2008:

6:39 PM Changeset [1355] by Peter
adding acknowledgment to apr
6:07 PM Changeset [1354] by Peter
minor improvement
5:16 PM Changeset [1353] by Peter
adding text on infinity in requirements
5:02 PM Changeset [1352] by Peter
fixing so distcheck passes through
3:54 PM Changeset [1351] by Peter
adding missing properties

Jun 21, 2008:

7:04 AM Changeset [1350] by Peter
using @PACKAGE@ and adding line 'Report bugs to...' in yat-config
6:59 AM Ticket #385 (AX_PATH_GSL fails if gslcblas is not available) closed by Peter
fixed: fixed in [1349]
6:57 AM Changeset [1349] by Peter
fixing #385 - setting env var GSL_CBLAS_LIB when gslcblas is not used
6:53 AM Ticket #376 (configure reports flag info that may be misleading) closed by Peter
fixed: fixed in [1348]
6:49 AM Changeset [1348] by Peter
adding a yat-config script (fixes #353) also fixes ticket #376 by …
4:40 AM Ticket #387 (allow to disable configure run-time checks) created by Peter
We have a couple of run-time checks in configure, for instance: …
4:31 AM Ticket #386 (AX_PATH_GSL doesn't check for GSL header files) created by Peter
I tried removing gsl header files, and the macro goes through without …
4:02 AM Ticket #385 (AX_PATH_GSL fails if gslcblas is not available) created by Peter
I tried removing gslcblas and then AX_PATH_GSL fails with these …

Jun 20, 2008:

3:37 PM Ticket #384 (what are the dependcy on 'make doc') created by Peter
related to [1347] see comment in [1347], but basically it seems like …
3:34 PM Changeset [1347] by Peter
deleting doxygen.error in 'make clean'. The flaw was detecting by …

Jun 19, 2008:

11:00 PM Changeset [1346] by Peter
adding some stuff in version test
9:23 PM Ticket #375 (send dogygen error message to a file) closed by Peter
fixed: sorry should be [1345]
9:21 PM Ticket #372 (version.h is not found by doxygen (when using VPATH)) closed by Peter
fixed: fixed in [1344]
9:20 PM Changeset [1345] by Peter
send doxygen error to a file - fixes #375
9:15 PM Changeset [1344] by Peter
let doxygen parse in builddir as well

Jun 18, 2008:

7:05 PM Ticket #383 (why both operator() and operator[] in Target?) closed by Peter
fixed: deprecated Target::operator[] in [1343] since it is only calling …
7:03 PM Changeset [1343] by Peter
deprecating Target::operator[]
6:47 PM Ticket #383 (why both operator() and operator[] in Target?) created by Peter
6:46 PM Ticket #382 (Create an Index object from a string in Target class) created by Peter
The class could be used to easily get which samples that belong to …
6:09 PM Changeset [1342] by Peter
fixing doxygen problems

Jun 17, 2008:

5:19 PM Changeset [1341] by Peter
correcting docs

Jun 12, 2008:

8:51 PM Changeset [1340] by Peter
fixing so declarations match implementations

Jun 7, 2008:

1:58 AM Changeset [1339] by Peter
Adding \since tag for new classes and functions
12:13 AM Changeset [1338] by Peter
updating docs

Jun 6, 2008:

9:00 PM Changeset [1337] by Peter
correcting docs
8:52 PM Changeset [1336] by Peter
oops
7:42 PM Changeset [1335] by Peter
missing from last commit
7:41 PM Changeset [1334] by Peter
Adding class Range

Jun 4, 2008:

4:59 PM Ticket #381 (Generalize Kernel_MEV) created by Peter
A matrix that calculates its element on the fly. It holds two ranges: …

Jun 3, 2008:

9:38 PM Ticket #380 (Default argument in OptionArg) created by Peter
Does it make sense to be able to set a default argument, i.e., if the …
8:36 PM Ticket #379 (Document how output created by OptionHelp) created by Peter
Give an example and explain how it can be tailored using the member …

May 31, 2008:

11:46 PM Changeset [1333] by Peter
updating copyright
11:37 PM Ticket #378 (FileUtil::exists() fails on large files) closed by Peter
fixed: in [1332]
11:36 PM Changeset [1332] by Peter
fixes #378

May 30, 2008:

2:48 AM Changeset [1331] by Peter
oops mistake in previous commit
2:33 AM Changeset [1330] by Peter
update LT_VERSION (a++) since implementation (in FileUtil?) was …
2:02 AM Ticket #378 (FileUtil::exists() fails on large files) created by Peter
Calling FileUtil::exists() on a large (37Gb) file results in […] …
12:55 AM Changeset [1329] by Peter
Fixed bug with errno. errno is int and taking string+int is not healthy.

May 29, 2008:

10:46 PM Ticket #377 (class for nucleotides) created by Peter
I need some utilities for dealing with sequences of nucleotides both …
10:12 PM Ticket #376 (configure reports flag info that may be misleading) created by Peter
In end of confiugure.ac we have these lines […] giving a summary …
4:46 PM Ticket #375 (send dogygen error message to a file) created by Peter
related to ticket:374 and ticket:162 Currently the error message is …
11:09 AM Ticket #233 (Links to documentation are broken) closed by Jari Häkkinen
fixed: Fixed, the trunk docs are not up to date.
10:58 AM Ticket #374 (Make documentation cron job report failures through email to maintainer.) created by Jari Häkkinen
related to ticket:375

May 28, 2008:

6:55 PM Ticket #233 (Links to documentation are broken) reopened by Peter
Link to trunk docs is broken again.

May 27, 2008:

5:50 PM Ticket #373 (Paramaterize how to calculate the average in Quantile Normalization) created by Peter
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