Timeline



Apr 18, 2011:

10:45 PM Changeset [2479] by Peter
refs #665. Declare PACKAGE_URL also with older autoconf. Snippet taken …
10:38 PM Ticket #665 (@PACKAGE_URL@ not replaced on thep.lu.se) created by Peter
Docs on …
10:20 PM Ticket #188 (Use GSL defined round of errors?) closed by Peter
wontfix: I suppose jari referred to this function …

Apr 16, 2011:

5:25 AM Changeset [2478] by Peter
correct incorrect merge

Apr 15, 2011:

10:28 PM Changeset [2477] by Peter
use dir build-aux in yat-hello

Apr 14, 2011:

11:40 PM Ticket #293 (False Discovery Rate) closed by Peter
fixed: (In [2476]) new function benjamini_hochberg. closes #293
11:40 PM Changeset [2476] by Peter
new function benjamini_hochberg. closes #293

Apr 13, 2011:

4:38 PM Changeset [2475] by Peter
typo
4:36 PM Changeset [2474] by Peter
indentation
4:17 PM Changeset [2473] by Peter
improve error message when calling yat-config incorrectly. Use …

Apr 12, 2011:

10:58 PM Changeset [2472] by Peter
fixed some docs errors
5:30 AM Changeset [2471] by Peter
bumping version to 0.7.3pre
5:21 AM Changeset [2470] by Peter
merge patch release 0.7.2 into trunk
2:58 AM Milestone yat 0.7.2 completed
Bugfix release - omic::Codon("ATG").amino_acid() now return 'M' …
2:54 AM SubversionCheckout edited by Peter
(diff)
2:53 AM WikiStart edited by Peter
(diff)
2:49 AM Changeset [2469] by Peter
tagging version 0.7.2
2:23 AM Changeset [2468] by Peter
updating copyright years
2:16 AM Changeset [2467] by Peter
Preparing release v0.7.2
2:10 AM Changeset [2466] by Peter
Fixed so percentiler ignores element with zero weight

Apr 11, 2011:

10:55 PM Changeset [2465] by Peter
avoid dereference end of range iterator.
10:31 PM Ticket #664 (Codon("ATG").amino_acid() returns '\0') closed by Peter
fixed: (In [2464]) fixes #664 (incorrect comment in r2464).
10:29 PM Changeset [2464] by Peter
fixes #644.
10:17 PM Ticket #664 (Codon("ATG").amino_acid() returns '\0') created by Peter
Codon("ATG").amino_acid() returns '\0' while I expected 'M'. The …
5:03 PM Changeset [2463] by Peter
remove deprecated configure options: --with-gsl-prefix and …
4:39 PM Changeset [2462] by Peter
docs grammar

Apr 9, 2011:

12:33 AM Ticket #663 (boostrap silence error messages) closed by Peter
fixed: (In [2461]) fixes #663. Avoid silencing stderr.
12:33 AM Changeset [2461] by Peter
fixes #663. Avoid silencing stderr.
12:17 AM Ticket #663 (boostrap silence error messages) created by Peter
I tried running bootstrap with a too old Autoconf […] which looks …

Apr 3, 2011:

5:44 PM Changeset [2460] by Peter
doc r2459 in NEWS
5:42 PM Changeset [2459] by Peter
make exception inherit from yat::utility::runtime_error rather than …
5:14 PM Ticket #637 (Always detect `--help` option) closed by Peter
fixed: (In [2458]) Always detect '--help' (fixes #637). Change …
5:14 PM Changeset [2458] by Peter
Always detect '--help' (fixes #637). Change CommandLine::parse so the …

Apr 1, 2011:

5:07 PM Changeset [2457] by Peter
doc typo

Mar 30, 2011:

2:12 AM Changeset [2456] by Peter
adding test for ticket refs #637.

Mar 29, 2011:

10:10 PM Ticket #662 (create test/environment.h with AC_CONFIG_HEADERS) closed by Peter
fixed: (In [2455]) closes #662
10:10 PM Changeset [2455] by Peter
closes #662
4:54 PM Changeset [2454] by Peter
update comment
4:39 PM Changeset [2453] by Peter
add gff test seed (to avoid make check failure)
1:42 PM Ticket #662 (create test/environment.h with AC_CONFIG_HEADERS) created by Peter
create test/environment.h with AC_CONFIG_HEADERS; otherwise it is …
1:23 PM Changeset [2452] by Peter
remove test/data/Makefile. distribute small.gff3
1:16 AM Changeset [2451] by Peter
update copyright years
12:05 AM Changeset [2450] by Peter
test gff3 file. refs #647

Mar 28, 2011:

11:41 PM Ticket #653 (set functions on SegmentSet (and friends possibly)) closed by Peter
wontfix: This will not be implemented. Please use Boost Interval Containers …
11:39 PM Ticket #635 (class for a Segment) closed by Peter
fixed: Ticket #640 was implemented in milestone:"yat 0.7", and #641 was …
11:36 PM Ticket #641 (Segment MultiContainer) closed by Peter
wontfix: This was introduced in Boost v1.46 as Interval Containers: …
11:31 PM Ticket #661 (Segments are hard-coded as semi-open) closed by Peter
wontfix: The interval library in Boost (since v1.46) implements this so no need …
8:57 PM Changeset [2449] by Peter
fix maintainer-check
8:57 PM Changeset [2448] by Peter
avoid sub-shell

Mar 24, 2011:

10:47 PM Ticket #661 (Segments are hard-coded as semi-open) created by Peter
Current implementation of class Segment are hard-coded as semi-open, …

Mar 20, 2011:

2:09 AM Changeset [2447] by Peter
test that configure does not abort prematurely
12:07 AM Changeset [2446] by Peter
need to distribute macros explicitely as long as we don't use them.
12:06 AM Changeset [2445] by Peter
adding a macro similar to AC_MSG_ERROR with the difference that it …

Mar 19, 2011:

12:30 AM Ticket #660 (median crashes on empty range) closed by Peter
fixed: (In [2444]) fixes #660
12:30 AM Changeset [2444] by Peter
fixes #660
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