Timeline



Dec 4, 2012:

3:17 AM Changeset [2884] by Peter
add missing since tags. refs #729

Dec 3, 2012:

1:48 PM Changeset [2883] by Peter
New classes to wrap around functionality provided by samtools. refs #729

Nov 18, 2012:

4:24 AM Changeset [2882] by Peter
add --enable-assert option (in configure)
2:28 AM Changeset [2881] by Peter
Define PP variables in config.h rather than in CPPFLAGS. Include …

Nov 17, 2012:

2:04 AM Changeset [2880] by Peter
update to autoconf macro archive 2012.11.14 (just serial # updated)

Nov 16, 2012:

2:47 AM Changeset [2879] by Peter
split function that splits on several chars

Nov 15, 2012:

1:23 AM Changeset [2878] by Peter
typo
1:20 AM Changeset [2877] by Peter
prepend LIBS to achieve recommended -lgsl -lcblas -lm

Nov 14, 2012:

8:55 AM Changeset [2876] by Peter
avoid word enable for something that is turned off with '--without'

Nov 13, 2012:

9:57 PM Changeset [2875] by Peter
delete leftover comments
12:27 PM Changeset [2874] by Peter
remove namespace bam. bam stuff will be put in omic namespace instead. …
12:15 PM Changeset [2873] by Peter
prefer using YAT_MSG_ERROR and simplify computation of …

Nov 12, 2012:

11:19 PM Changeset [2872] by Peter
prefer YAT_MSG_ERROR. using it in inf test
11:16 PM Changeset [2871] by Peter
prefer YAT_MSG_ERROR. using it in quiet_NAN test
11:06 PM Changeset [2870] by Peter
mention samtools and zlib requirements in README
10:42 PM Changeset [2869] by Peter
improve error messages. emove debug code. refs #729
10:28 PM Changeset [2868] by Peter
refs #729. Add configure tests for samtools
1:40 AM Changeset [2867] by Peter
A log2 function similar to std::log10.

Nov 11, 2012:

10:08 AM Changeset [2866] by Peter
remove -Werror option for automake
1:58 AM Changeset [2865] by Peter
rename record file because file named 'conftest*' are deleted inside …

Nov 10, 2012:

11:01 PM Changeset [2864] by Peter
file structure and empty automake file for new bam namespace. refs #729
9:25 AM Ticket #729 (samtools wrapper classes) created by Peter
samtools C api is very useful to handle bamfiles but the API requires …
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