Timeline
Dec 13, 2012:
- 8:39 AM Changeset [2902] by
- test for bam_pair_analyse. refs #729
- 2:30 AM Changeset [2901] by
- make random generators to model adaptable Generators
- 1:32 AM Changeset [2900] by
- remove trailing WS
- 1:30 AM Changeset [2899] by
- function bam_pair_analyse
Dec 12, 2012:
- 6:13 AM Changeset [2898] by
- dox typo
Dec 11, 2012:
- 8:27 AM Changeset [2897] by
- prefer throwing yat::utility::runtime_error. refs #729
Dec 10, 2012:
- 10:52 PM Changeset [2896] by
- improve doc and remove private classes from docs
- 10:38 PM Changeset [2895] by
- add two tests for bam functionality
- 4:53 AM Changeset [2894] by
- fix VPATH build issues
Dec 9, 2012:
- 8:17 AM Changeset [2893] by
- run (also C++) tests in specific test dir so test can create temporary …
- 8:15 AM Changeset [2892] by
- add functions mkdir, mkdir_p, basename, dirname. refs #717
- 12:53 AM Changeset [2891] by
- check for samtools in configure; create bam file in 'make check' if we …
Dec 7, 2012:
- 9:09 AM Changeset [2890] by
- prefer calling base class constructor explicitly
- 9:06 AM Ticket #730 (binomial random number) closed by
- fixed: (In [2889]) Binomial distribution. fixes #730
- 9:06 AM Changeset [2889] by
- Binomial distribution. fixes #730
Dec 5, 2012:
- 11:06 AM Ticket #730 (binomial random number) created by
- I needed to generate random numbers from a binomial distribution and …
- 7:43 AM Changeset [2888] by
- add example SAM file. refs #729
- 5:18 AM Changeset [2887] by
- docs typo
- 4:43 AM Changeset [2886] by
- fast swap for BamRead?
- 1:02 AM Ticket #728 (documentation displays full absolute include path) closed by
- fixed: (In [2885]) fixes #728
- 1:02 AM Changeset [2885] by
- fixes #728
Dec 4, 2012:
- 3:17 AM Changeset [2884] by
- add missing since tags. refs #729
Dec 3, 2012:
- 1:48 PM Changeset [2883] by
- New classes to wrap around functionality provided by samtools. refs #729
Nov 18, 2012:
- 4:24 AM Changeset [2882] by
- add --enable-assert option (in configure)
- 2:28 AM Changeset [2881] by
- Define PP variables in config.h rather than in CPPFLAGS. Include …
Nov 17, 2012:
- 2:04 AM Changeset [2880] by
- update to autoconf macro archive 2012.11.14 (just serial # updated)
Nov 16, 2012:
- 2:47 AM Changeset [2879] by
- split function that splits on several chars
Nov 15, 2012:
- 1:23 AM Changeset [2878] by
- typo
- 1:20 AM Changeset [2877] by
- prepend LIBS to achieve recommended -lgsl -lcblas -lm
Nov 14, 2012:
- 8:55 AM Changeset [2876] by
- avoid word enable for something that is turned off with '--without'
Nov 13, 2012:
- 9:57 PM Changeset [2875] by
- delete leftover comments
- 12:27 PM Changeset [2874] by
- remove namespace bam. bam stuff will be put in omic namespace instead. …
- 12:15 PM Changeset [2873] by
- prefer using YAT_MSG_ERROR and simplify computation of …
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