Timeline
Jan 4, 2013:
- 7:40 AM Changeset [2944] by
- bumping version to 0.10.1pre
- 7:38 AM Changeset [2943] by
- merge release 0.10 into trunk
- 7:27 AM Milestone yat 0.10 completed
- Introduction of some wrapper classes for …
- 7:27 AM SubversionCheckout edited by
- release 0.10 (diff)
- 7:24 AM WikiStart edited by
- release 0.10 (diff)
- 7:15 AM Changeset [2942] by
- tagging version 0.10
- 6:44 AM Changeset [2941] by
- correct typo
- 6:42 AM Changeset [2940] by
- update copyright years
- 6:37 AM Changeset [2939] by
- Prepare 0.10 release
Jan 3, 2013:
- 9:33 AM Ticket #731 (yat_revision_header fails with Automake 1.13) closed by
- fixed: (In [2938]) unset some make variables in tests. fixes #731
- 9:33 AM Changeset [2938] by
- unset some make variables in tests. fixes #731
- 1:48 AM Ticket #731 (yat_revision_header fails with Automake 1.13) created by
- Test log contains […] looks like make communicates some variable …
Jan 2, 2013:
- 12:09 AM Changeset [2937] by
- improve doc
Jan 1, 2013:
- 7:58 AM Changeset [2936] by
- avoid repeating code
Dec 31, 2012:
- 3:48 AM Changeset [2935] by
- avoid multiple calls to join_all (and underlying join) which might be …
Dec 30, 2012:
- 11:36 AM Changeset [2934] by
- check that compiled and linked versions are the same
Dec 28, 2012:
- 4:20 AM Changeset [2933] by
- avoid transfer exception between threads. Print as early as possible. …
Dec 27, 2012:
- 2:00 AM Changeset [2932] by
- remove misleading comment as these files are no longer direct input to …
- 1:51 AM Changeset [2931] by
- add test that configure --without-samtools within maintainer-check
- 1:50 AM Changeset [2930] by
- fix typo and ensure directory exists bfore creating file in it.
Dec 26, 2012:
- 2:32 AM Changeset [2929] by
- add EXIT_SKIP macro. make test compile also --without-samtools
- 12:20 AM Changeset [2928] by
- Support different styles of including bam header files: <bam.h>, …
Dec 21, 2012:
- 1:06 AM Changeset [2927] by
- remove old core dumps in test prologue (to avoid accumulation of …
Dec 20, 2012:
- 12:06 PM Changeset [2926] by
- Added missing include
Dec 19, 2012:
- 10:41 PM Changeset [2925] by
- let bam files depend on Makefile to 1) regenerate bam files when rules …
- 3:12 PM Changeset [2924] by
- cater for older samtools without support for '-o' switch
- 12:42 PM Changeset [2923] by
- Adding missing include
- 12:34 PM WikiStart edited by
- Link to 0.10-beta documentation (diff)
- 11:30 AM Changeset [2922] by
- mention samtools and zlib in README.
- 8:02 AM Changeset [2921] by
- bump version to 0.11pre
- 7:55 AM Changeset [2920] by
- New stable branch for 0.10.x
- 7:54 AM Changeset [2919] by
- update copyright years
- 7:49 AM Changeset [2918] by
- prepare new stable release 0.10
- 7:44 AM Changeset [2917] by
- bump version to 0.9.3pre
- 7:42 AM Changeset [2916] by
- merge patch release 0.9.2 into trunk. Ignore changes in …
- 7:32 AM Milestone yat 0.9.2 completed
- This is a bugfix release [[TicketQuery(...)]] …
- 7:32 AM SubversionCheckout edited by
- release 0.9.2 (diff)
- 7:30 AM WikiStart edited by
- release 0.9.2 (diff)
- 7:28 AM Changeset [2915] by
- tagging version 0.9.2
- 7:09 AM Changeset [2914] by
- setting release date
- 7:09 AM Changeset [2913] by
- Preparing release 0.9.2
Dec 17, 2012:
- 11:54 AM Changeset [2912] by
- docs typo
- 3:32 AM Changeset [2911] by
- accidently included in r2910
- 3:31 AM Ticket #729 (samtools wrapper classes) closed by
- fixed: (In [2910]) improve docs. closes #729
- 3:31 AM Changeset [2910] by
- improve docs. closes #729
Dec 16, 2012:
- 1:57 PM Changeset [2909] by
- avoid creating a MatrixLookupWeighted? from a Matrix as it involves …
- 7:24 AM Ticket #717 (svndigest utilility functions) closed by
- fixed
Dec 15, 2012:
- 9:30 AM Changeset [2908] by
- copy tests from http://dev.thep.lu.se/svndigest code. refs #717
- 8:48 AM Changeset [2907] by
- extend intererface with mode_t as in C api and improve docs. refs #717
- 7:29 AM Changeset [2906] by
- New functions chdir, chmod, copy_file, fnmatch, remove, rename, and …
Dec 14, 2012:
- 1:03 AM Changeset [2905] by
- remove superfluous 'using'
- 1:00 AM Changeset [2904] by
- boost concept check. refs #729
- 12:40 AM Changeset [2903] by
- refs #729. document bam_pair_analyse
Dec 13, 2012:
- 8:39 AM Changeset [2902] by
- test for bam_pair_analyse. refs #729
- 2:30 AM Changeset [2901] by
- make random generators to model adaptable Generators
- 1:32 AM Changeset [2900] by
- remove trailing WS
- 1:30 AM Changeset [2899] by
- function bam_pair_analyse
Dec 12, 2012:
- 6:13 AM Changeset [2898] by
- dox typo
Dec 11, 2012:
- 8:27 AM Changeset [2897] by
- prefer throwing yat::utility::runtime_error. refs #729
Dec 10, 2012:
- 10:52 PM Changeset [2896] by
- improve doc and remove private classes from docs
- 10:38 PM Changeset [2895] by
- add two tests for bam functionality
- 4:53 AM Changeset [2894] by
- fix VPATH build issues
Dec 9, 2012:
- 8:17 AM Changeset [2893] by
- run (also C++) tests in specific test dir so test can create temporary …
- 8:15 AM Changeset [2892] by
- add functions mkdir, mkdir_p, basename, dirname. refs #717
- 12:53 AM Changeset [2891] by
- check for samtools in configure; create bam file in 'make check' if we …
Dec 7, 2012:
- 9:09 AM Changeset [2890] by
- prefer calling base class constructor explicitly
- 9:06 AM Ticket #730 (binomial random number) closed by
- fixed: (In [2889]) Binomial distribution. fixes #730
- 9:06 AM Changeset [2889] by
- Binomial distribution. fixes #730
Dec 5, 2012:
- 11:06 AM Ticket #730 (binomial random number) created by
- I needed to generate random numbers from a binomial distribution and …
- 7:43 AM Changeset [2888] by
- add example SAM file. refs #729
- 5:18 AM Changeset [2887] by
- docs typo
- 4:43 AM Changeset [2886] by
- fast swap for BamRead?
- 1:02 AM Ticket #728 (documentation displays full absolute include path) closed by
- fixed: (In [2885]) fixes #728
- 1:02 AM Changeset [2885] by
- fixes #728
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