Timeline
Jan 17, 2013:
- 9:22 AM Changeset [2961] by
- post release admin
- 9:19 AM Changeset [2960] by
- merge patch release 0.10.1 into trunk
- 9:08 AM Milestone yat 0.10.1 completed
- Bug fix release.
- 9:07 AM SubversionCheckout edited by
- release 0.10.1 (diff)
- 9:06 AM WikiStart edited by
- release 0.10.1 (diff)
- 9:02 AM Changeset [2959] by
- tagging version 0.10.1
- 8:31 AM Changeset [2958] by
- prepare release 0.10.1
- 7:55 AM Ticket #741 (MergeIterator) created by
- I need this for BamReadIterator but no reason to limit to …
- 2:17 AM Changeset [2957] by
- update copyright years
- 2:14 AM Changeset [2956] by
- update NEWS
- 2:00 AM Changeset [2955] by
- refs #736. Fix creation of yat.pc
Jan 16, 2013:
- 9:33 AM Tickets #733,736 batch updated by
- fixed: (In [2954]) fixes #733 and #736. Do not link -lbam into libyat.la, but …
- 9:33 AM Changeset [2954] by
- fixes #733 and #736. Do not link -lbam into libyat.la, but do mention …
- 8:39 AM Ticket #740 (BamHeader::target_length(size_t) not implemented) closed by
- fixed: (In [2953]) implement BamHeader::target_length(). fixes #740
- 8:39 AM Changeset [2953] by
- implement BamHeader::target_length(). fixes #740
- 1:07 AM Ticket #740 (BamHeader::target_length(size_t) not implemented) created by
- 12:53 AM Ticket #739 (bam_parse_region with yat interface) created by
- I'm using yat's interface against samtools and wanted to use …
Jan 15, 2013:
- 9:15 AM Ticket #738 (Functor to filter BamReads) created by
- Quite often one want to iterate through a bam file and ignore certain …
- 5:50 AM Ticket #737 (test [in configure] whether libs can be used to create shared libyat) created by
- spinn off from #733 To solve problems reported in ticket #733 we …
Jan 11, 2013:
- 7:01 AM Ticket #716 (look for openblas in configure) closed by
- fixed: (In [2952]) look for openblas. closes #716
- 7:01 AM Changeset [2952] by
- look for openblas. closes #716
- 2:33 AM Changeset [2951] by
- add deps for lazycheck
- 2:24 AM Ticket #734 (test yat.pc) closed by
- fixed: (In [2950]) test for yat.pc. closes #734
- 2:24 AM Changeset [2950] by
- test for yat.pc. closes #734
Jan 10, 2013:
- 9:21 AM Ticket #736 (-lbam and -lz are not mentioned in yat.pc) created by
- bam and z should be mentioned in Libs.private, which is only used with …
- 2:29 AM Changeset [2949] by
- comments describing defines from bam.h
- 2:22 AM Changeset [2948] by
- prefer AC_SEARCH_LIBS over AC_CHECK_LIB
- 2:09 AM Ticket #735 (missing HAVE_SAMTOOLS_BAM_H in config_public.h.in) closed by
- fixed: (In [2947]) #define/#undef HAVE_SAMTOOL_BAM_H in config_public.h.in …
- 2:09 AM Changeset [2947] by
- #define/#undef HAVE_SAMTOOL_BAM_H in config_public.h.in and remove …
- 2:02 AM Ticket #735 (missing HAVE_SAMTOOLS_BAM_H in config_public.h.in) created by
- Changeset r2928 introduced some defines in config_public.h.in that is …
- 12:48 AM Ticket #734 (test yat.pc) created by
- Usage of the yat.pc file is not tested. We should add a test that uses …
Jan 9, 2013:
- 10:36 AM Changeset [2946] by
- avoid duplication
- 5:58 AM Ticket #733 (build failure with static libbam) created by
- I get the following error message when trying to build yat […] …
- 4:40 AM Ticket #701 (avoid release merge conflicts) closed by
- wontfix: The main problem, undetected merges of PATCH_VERSION updates, was …
Jan 8, 2013:
- 8:05 AM Ticket #732 (use AC_CONFIG_MACRO_DIRS) created by
- New versions of autotools recommend using […] instead of […] and …
Jan 7, 2013:
- 5:30 AM Changeset [2945] by
- avoid warning from Automake
Jan 4, 2013:
- 7:40 AM Changeset [2944] by
- bumping version to 0.10.1pre
- 7:38 AM Changeset [2943] by
- merge release 0.10 into trunk
- 7:27 AM Milestone yat 0.10 completed
- Introduction of some wrapper classes for …
- 7:27 AM SubversionCheckout edited by
- release 0.10 (diff)
- 7:24 AM WikiStart edited by
- release 0.10 (diff)
- 7:15 AM Changeset [2942] by
- tagging version 0.10
- 6:44 AM Changeset [2941] by
- correct typo
- 6:42 AM Changeset [2940] by
- update copyright years
- 6:37 AM Changeset [2939] by
- Prepare 0.10 release
Jan 3, 2013:
- 9:33 AM Ticket #731 (yat_revision_header fails with Automake 1.13) closed by
- fixed: (In [2938]) unset some make variables in tests. fixes #731
- 9:33 AM Changeset [2938] by
- unset some make variables in tests. fixes #731
- 1:48 AM Ticket #731 (yat_revision_header fails with Automake 1.13) created by
- Test log contains […] looks like make communicates some variable …
Jan 2, 2013:
- 12:09 AM Changeset [2937] by
- improve doc
Jan 1, 2013:
- 7:58 AM Changeset [2936] by
- avoid repeating code
Dec 31, 2012:
- 3:48 AM Changeset [2935] by
- avoid multiple calls to join_all (and underlying join) which might be …
Dec 30, 2012:
- 11:36 AM Changeset [2934] by
- check that compiled and linked versions are the same
Dec 28, 2012:
- 4:20 AM Changeset [2933] by
- avoid transfer exception between threads. Print as early as possible. …
Dec 27, 2012:
- 2:00 AM Changeset [2932] by
- remove misleading comment as these files are no longer direct input to …
- 1:51 AM Changeset [2931] by
- add test that configure --without-samtools within maintainer-check
- 1:50 AM Changeset [2930] by
- fix typo and ensure directory exists bfore creating file in it.
Dec 26, 2012:
- 2:32 AM Changeset [2929] by
- add EXIT_SKIP macro. make test compile also --without-samtools
- 12:20 AM Changeset [2928] by
- Support different styles of including bam header files: <bam.h>, …
Dec 21, 2012:
- 1:06 AM Changeset [2927] by
- remove old core dumps in test prologue (to avoid accumulation of …
Dec 20, 2012:
- 12:06 PM Changeset [2926] by
- Added missing include
Dec 19, 2012:
- 10:41 PM Changeset [2925] by
- let bam files depend on Makefile to 1) regenerate bam files when rules …
- 3:12 PM Changeset [2924] by
- cater for older samtools without support for '-o' switch
- 12:42 PM Changeset [2923] by
- Adding missing include
- 12:34 PM WikiStart edited by
- Link to 0.10-beta documentation (diff)
- 11:30 AM Changeset [2922] by
- mention samtools and zlib in README.
- 8:02 AM Changeset [2921] by
- bump version to 0.11pre
- 7:55 AM Changeset [2920] by
- New stable branch for 0.10.x
- 7:54 AM Changeset [2919] by
- update copyright years
- 7:49 AM Changeset [2918] by
- prepare new stable release 0.10
- 7:44 AM Changeset [2917] by
- bump version to 0.9.3pre
- 7:42 AM Changeset [2916] by
- merge patch release 0.9.2 into trunk. Ignore changes in …
- 7:32 AM Milestone yat 0.9.2 completed
- This is a bugfix release [[TicketQuery(...)]] …
- 7:32 AM SubversionCheckout edited by
- release 0.9.2 (diff)
- 7:30 AM WikiStart edited by
- release 0.9.2 (diff)
- 7:28 AM Changeset [2915] by
- tagging version 0.9.2
- 7:09 AM Changeset [2914] by
- setting release date
- 7:09 AM Changeset [2913] by
- Preparing release 0.9.2
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