Timeline



Jul 1, 2013:

7:44 AM Changeset [3058] by Peter
fix docs typo
7:38 AM Changeset [3057] by Peter
New class: multithread safe queue

Jun 27, 2013:

2:24 AM Ticket #765 (re-implement WeightedIterator as boost:zip_iterator) created by Peter
WeightedIterator is a special case of boost::zip_iterator and I …

Jun 24, 2013:

8:37 AM Ticket #764 (BamReadIterator with invalid region) closed by Peter
fixed: (In [3056]) fixes #764: throw if region in BamReadIterator? is invalid
8:37 AM Changeset [3056] by Peter
fixes #764: throw if region in BamReadIterator? is invalid

Jun 16, 2013:

2:21 AM Ticket #746 (non-const access to data in BamRead) closed by Peter
fixed: (In [3055]) closes #746. New function BamRead::name(1)
2:21 AM Changeset [3055] by Peter
closes #746. New function BamRead::name(1)

Jun 15, 2013:

1:47 AM Ticket #746 (non-const access to data in BamRead) reopened by Peter
Since everything else can be modified, I think we should allow …
1:41 AM Ticket #757 (m4 macro checking that -lyat has bam support) closed by Peter
fixed: (In [3054]) fetch flags directly from yat-config as variables YAT_* …
1:41 AM Changeset [3054] by Peter
fetch flags directly from yat-config as variables YAT_* might be …

Jun 13, 2013:

10:21 AM Ticket #763 (YAT_LT_LINK_IFELSE does not respect late changes to variables) closed by Peter
invalid
10:20 AM Changeset [3053] by Peter
refs #757. new macro linking against bam stuff in libyat
10:19 AM Changeset [3052] by Peter
remove empty line

Jun 12, 2013:

3:28 AM Ticket #764 (BamReadIterator with invalid region) created by Peter
Currently, BamReadIterator::IndexActor constructor contains […] I …
2:19 AM Changeset [3051] by Peter
simplify code
2:18 AM Changeset [3050] by Peter
prefer including as <config.h> rather than "config.h"
2:17 AM Changeset [3049] by Peter
fix typo in error message in sc_config_h rule
2:16 AM Changeset [3048] by Peter
avoid cassert in header file

Jun 9, 2013:

11:32 AM Ticket #763 (YAT_LT_LINK_IFELSE does not respect late changes to variables) created by Peter
YAT_USE_LIBTOOL_PUSH contains […] which is fine and $ac_link prior …
7:10 AM Changeset [3047] by Peter
add missing Id tag
7:09 AM Changeset [3046] by Peter
include boost_exception_ptr.h in copyright update
7:00 AM Ticket #762 (<boost/exception_ptr.hpp> in boost 1.41 problematic) closed by Peter
fixed: (In [3045]) fixes #762. workaround for broken boost header (in v1.41)
7:00 AM Changeset [3045] by Peter
fixes #762. workaround for broken boost header (in v1.41)
6:31 AM Changeset [3044] by Peter
unpatched boost header file. refs #762

Jun 8, 2013:

3:19 PM Changeset [3043] by Peter
avoid using deprecated functions in test
3:06 PM Changeset [3042] by Peter
make rules for samtools more silent-rules friendly
2:51 PM Changeset [3041] by Peter
fix distcheck issues
2:03 PM Ticket #761 (Create libs that can be used in tests for m4 macros) closed by Peter
fixed: (In [3040]) create build rule for test shared lib. closes #761
2:03 PM Changeset [3040] by Peter
create build rule for test shared lib. closes #761

Jun 7, 2013:

3:46 PM Changeset [3039] by Peter
avoid building static when static is disabled which might indicate …
3:24 PM Changeset [3038] by Peter
refs #761. added make rule to create static library

Jun 6, 2013:

4:59 AM Ticket #762 (<boost/exception_ptr.hpp> in boost 1.41 problematic) created by Peter
[…] The problem is better explained here. …

Jun 4, 2013:

2:08 AM Changeset [3037] by Peter
make shell tests work in VPATH build

Jun 3, 2013:

10:19 AM Changeset [3036] by Peter
common_defs does two things: 1) init test scripts 2) defines some …

Jun 1, 2013:

10:22 AM Ticket #761 (Create libs that can be used in tests for m4 macros) created by Peter
Needed for #759 and #760 We need one static library and one shared. …
10:18 AM Ticket #760 (Create a macro that can test whether static library is available) created by Peter
Needed for #737
10:18 AM Ticket #759 (Create a macro that can test whether shared library is available) created by Peter
Needed for #737 We should use libtool to link and if possible static …
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